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Presenting your structures: the CCP 4 mg molecular-graphics software

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McNicholas, S., Potterton, E., Wilson, K. S., Noble, M. E. M.·2011·Acta Crystallographica Section D Biological Crystallography

Abstract

CCP4mg is a molecular-graphics program that is designed to give rapid access to both straightforward and complex static and dynamic representations of macromolecular structures. It has recently been updated with a new interface that provides more sophisticated atom-selection options and a wizard to facilitate the generation of complex scenes. These scenes may contain a mixture of coordinate-derived and abstract graphical objects, including text objects, arbitrary vectors, geometric objects and imported images, which can enhance a picture and eliminate the need for subsequent editing. Scene descriptions can be saved to file and transferred to other molecules. Here, the substantially enhanced version 2 of the program, with a new underlying GUI toolkit, is described. A built-in rendering module produces publication-quality images.

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Research works printed but not linked: 37

  1. Abagyan, 2006, Trends Biochem. Sci., 31, 76, 10.1016/j.tibs.2005.12.006 · DOI
  2. Artymiuk, 1989, J. Inform. Sci., 15, 287, 10.1177/016555158901500411 · DOI
  3. Bernstein, 2000, Trends Biochem. Sci., 25, 453, 10.1016/S0968-0004(00)01606-6 · DOI
  4. Carson, 1997, Methods Enzymol., 277, 493, 10.1016/S0076-6879(97)77027-7 · DOI
  5. Chan, 2004, J. Mol. Biol., 341, 503, 10.1016/j.jmb.2004.06.028 · DOI
  6. Christopher, 1996, Comput. Chem., 20, 339, 10.1016/0097-8485(95)00075-5 · DOI
  7. Connolly, 1983, Science, 221, 709, 10.1126/science.6879170 · DOI · Paper page
  8. Cowtan, 2003, IUCr Comput. Commun. Newsl., 2, 4
  9. Dayringer, 1986, J. Mol. Graph., 4, 82, 10.1016/0263-7855(86)80002-9 · DOI
  10. Edgar, 2004, Nucleic Acids Res., 32, 1792, 10.1093/nar/gkh340 · DOI · Paper page
  11. Emsley, 2010, Acta Cryst. D, 66, 486, 10.1107/S0907444910007493 · DOI · Paper page
  12. Esnouf, 1999, J. Mol. Graph., 15, 132, 10.1016/S1093-3263(97)00021-1 · DOI
  13. Esnouf, 1999, Acta Cryst. D, 55, 938, 10.1107/S0907444998017363 · DOI · Paper page
  14. Ferrin, 1988, J. Mol. Graph., 6, 13, 10.1016/0263-7855(88)80054-7 · DOI · Paper page
  15. Gans, 2001, J. Mol. Graph. Model., 19, 557, 10.1016/S1093-3263(01)00090-0 · DOI
  16. García-Nafría, 2010, Acta Cryst. D, 66, 953, 10.1107/S0907444910026272 · DOI
  17. González, 2001, Acta Cryst. D, 57, 767, 10.1107/S0907444901004255 · DOI
  18. Green, 2009, Proc. Natl Acad. Sci. USA, 106, 11713, 10.1073/pnas.0903228106 · DOI
  19. Gruber, 2007, Acta Cryst. D, 63, 50, 10.1107/S0907444906046762 · DOI
  20. Guex, 1997, Electrophoresis, 18, 2714, 10.1002/elps.1150181505 · DOI · Paper page
  21. Hartshorn, 2002, J. Comput. Aided Mol. Des., 16, 871, 10.1023/A:1023813504011 · DOI
  22. Johnson, 2008, Nucleic Acids Res., 36, W5, 10.1093/nar/gkn201 · DOI · Paper page
  23. Kraulis, 1991, J. Appl. Cryst., 24, 946, 10.1107/S0021889891004399 · DOI · Paper page
  24. Krissinel, 2010, J. Comput. Chem., 31, 133, 10.1002/jcc.21303 · DOI
  25. Krissinel, 2004, Acta Cryst. D, 60, 2256, 10.1107/S0907444904026460 · DOI
  26. Krissinel, E. & Henrick, K. (2005). CompLife 2005, edited by M. R. Berthold, R. Glen, K. Diederichs, O. Kohlbacher & I. Fischer, pp. 163-174. Berlin/Heidelberg: Springer-Verlag.
  27. Krissinel, 2007, J. Mol. Biol., 372, 774, 10.1016/j.jmb.2007.05.022 · DOI · Paper page
  28. Krissinel, 2004, Acta Cryst. D, 60, 2250, 10.1107/S0907444904027167 · DOI
  29. Lee, 1971, J. Mol. Biol., 55, 379, 10.1016/0022-2836(71)90324-X · DOI
  30. Lesk, A. M., Bernstein, H. J. & Bernstein, F. C. (2008). Computational Structural Biology: Methods and Applications, edited by T. Schwede & M. Peitsch, pp. 729-770. Singapore: World Scientific Publishing Company.
  31. Martz, 2002, Trends Biochem. Sci., 27, 107, 10.1016/S0968-0004(01)02008-4 · DOI
  32. McWilliam, 2009, Nucleic Acids Res., 37, W6, 10.1093/nar/gkp302 · DOI
  33. Merritt, 1997, Methods Enzymol., 277, 505, 10.1016/S0076-6879(97)77028-9 · DOI
  34. Petterson, 2004, J. Comput. Chem., 25, 1605, 10.1002/jcc.20084 · DOI · Paper page
  35. Potterton, 2002, Acta Cryst. D, 58, 1955, 10.1107/S0907444902015391 · DOI
  36. Potterton, 2004, Acta Cryst. D, 60, 2288, 10.1107/S0907444904023716 · DOI · Paper page
  37. Sayle, 1995, Trends Biochem. Sci., 20, 374, 10.1016/S0968-0004(00)89080-5 · DOI

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Metadata

Authors
McNicholas, S., Potterton, E., Wilson, K. S., & Noble, M. E. M.
Venue
Acta Crystallographica Section D Biological Crystallography
Published
2011-03-18
Volume
67
Issue
4
Pages
386-394
ISSN
0907-4449 (ISSN-L)
OpenAlex
W1892158199
Cited by
1,308
References
2
FWCI
36.10
Type
journal article
Language
en
Open access
hybrid
Licence

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CoChat. (2026). Citation check: Presenting your structures: the CCP 4 mg molecular-graphics software. https://app.cochat.ai/papers/10.1107/s0907444911007281
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McNicholas, S., Potterton, E., Wilson, K. S., & Noble, M. E. M. (2011). Presenting your structures: the CCP 4 mg molecular-graphics software. Acta Crystallographica Section D Biological Crystallography. https://doi.org/10.1107/s0907444911007281

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