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In silico screening of a saturated mutation library of tomato

Open access
Menda, Naama, Semel, Yaniv, Peled, Dror, Eshed, Yuval, Zamir, Dani·2004·The Plant Journal

Abstract

Summary: A comprehensive mutant population is a basic resource for exploring gene function. We developed an isogenic tomato ‘mutation library’ in the genetic background of the inbred variety M82. A total of 13 000 M 2 families, derived from EMS (ethyl methane sulfonate) and fast‐neutron mutagenesis, were visually phenotyped in the field and categorized into a morphological catalog that includes 15 primary and 48 secondary categories. Currently, 3417 mutations have been cataloged; among them are most of the previously described phenotypes from the monogenic mutant collection of The Tomato Genetics Resource Center, and over a thousand new mutants, with multiple alleles per locus. The phenotypic database indicates that most mutations fall into more than a single category (pleiotropic), with some organs such as leaves more prone to alterations than others. All data and images can be searched and accessed in the Solanaceae Genome Network (SGN) on a site called ‘The Genes That Make Tomatoes’ (http://zamir.sgn.cornell.edu/mutants/).

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Crossref · 10.1111/j.1365-313x.2004.02088.x

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Metadata

Authors
Menda, N., Semel, Y., Peled, D., Eshed, Y., & Zamir, D.
Venue
The Plant Journal
Publisher
Wiley
Published
2004-04-19
Volume
38
Issue
5
Pages
861-872
ISSN
  • 0960-7412 (ISSN-L)
  • 1365-313X
OpenAlex
W2169652952
Cited by
290
References
1
FWCI
12.00
Type
journal article
Language
en
Open access
bronze

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CoChat. (2026). Citation check: In silico screening of a saturated mutation library of tomato. https://app.cochat.ai/papers/10.1111/j.1365-313x.2004.02088.x
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Menda, N., Semel, Y., Peled, D., Eshed, Y., & Zamir, D. (2004). In silico screening of a saturated mutation library of tomato. The Plant Journal. https://doi.org/10.1111/j.1365-313x.2004.02088.x

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