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The Genetic Structure and History of Africans and African Americans
Open accessAbstract
African Origins: The modern human originated in Africa and subsequently spread across the globe. However, the genetic relationships among the diverse populations on the African continent have been unclear. Tishkoff et al. (p. 1035; see the cover, published online 30 April) provide a detailed genetic analysis of most major groups of African populations. The findings suggest that Africans represent 14 ancestral populations. Populations tend to be of mixed ancestry which documents historical migrations. The data mainly support but sometimes challenge proposed relationships between groups of self-identified ethnicity previously hypothesized on the basis of linguistic studies. The authors also examined populations of African Americans and individuals of mixed ancestry from Cape Town, documenting the variation and origins of admixture within these groups.
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“More recent studies that utilized high-density genotype data provide reliable individual ancestry estimates, illustrate the large variability in African and European ancestry proportions at an individual level, and are able to detect low proportions of Native American ancestry.3–11”
From The genetic ancestry of African Americans, Latinos, and European Americans across the United States (2015) · cites this paper as [8]
Experimental — accuracy not yet measuredIn the citing paper
“The Sandawe have admixed with neighboring populations of diverse ancestries who migrated into Tanzania within the past 5000 years [73].”
From Population structure of human gut bacteria in a diverse cohort from rural Tanzania and Botswana (2019) · cites this paper as [73]
In the citing paper
“This rich diversity is supported by genome‐wide microsatellite DNA variation in 3000 African subjects demonstrating 14 ancestral population groupings.”
From The evolution of human skin pigmentation: A changing medley of vitamins, genetic variability, and UV radiation during human expansion (2023) · cites this paper as Tishkoff et al., 2009
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Using modern human cortical bone distribution to test the systemic robusticity hypothesis
Baab, K. L., Copes, L. E., Ward, D. L., Wells, N., & Grine, F. E. (2018) · Journal of Human Evolution · doi:10.1016/j.jhevol.2018.03.003 · Cited by 14
Morphometric analysis of the humerus in an adult South African cadaveric sample
Maass, P., & Friedling, L. J. (2018) · Forensic Science International · doi:10.1016/j.forsciint.2018.04.037 · Cited by 12
Shriner, D., & Rotimi, C. N. (2018) · American Journal of Physical Anthropology · doi:10.1002/ajpa.23711 · Cited by 12
van der Linden, E. L., Meeks, K. A. C., Beune, E., Aikins, A. D., Addo, J., Owusu‐Dabo, E., Mockenhaupt, F. P., Bahendeka, S., Danquah, I., Schulze, M. B., et al. (2019) · Atherosclerosis · doi:10.1016/j.atherosclerosis.2019.02.030 · Cited by 12
Nováčková, J., Čížková, M., Mokhtar, M. G., Duda, P., Stenzl, V., Tříska, P., Hofmanová, Z., & Černý, V. (2020) · American Journal of Physical Anthropology · doi:10.1002/ajpa.24001 · Cited by 12
Copy number variation in human genomes from three major ethno-linguistic groups in Africa
Nyangiri, O. A., Noyes, H. A., Mulindwa, J., Ilboudo, H., Kaboré, J. W., Ahouty, B., Koffi, M., Asina, O. F., Ngoyi, D. M., Ofon, E. A., et al. (2020) · BMC Genomics · doi:10.1186/s12864-020-6669-y · Cited by 12
Oluwole, O. G., Esoh, K. K., Wonkam‐Tingang, E., Manyisa, N. R., Noubiap, J. J., Chimusa, E. R., & Wonkam, A. (2020) · Experimental Biology and Medicine · doi:10.1177/1535370220960388 · Cited by 12
“The population structure analysis of the WES dataset investigated in this study further highlights high genetic structure differences between the cohorts and across different African populations, a diversity associated with nearly 300,000 years of evolutionary changes.(21) This is an indication that future study on HI…”
BackgroundOdumade, O. A., Plotkin, A. L., Pak, J., Idoko, O. T., Pettengill, M. A., Kollmann, T. R., Ozonoff, A., Kampmann, B., Levy, O., & Smolen, K. K. (2021) · Frontiers in Immunology · doi:10.3389/fimmu.2021.578700 · Cited by 12
“Ethnicity can impact plasma biomarkers (80, 81) and ethnicity, language, and geography have been associated with genetic diversity in African populations (82).”
BackgroundHaddish, K., Chierto, E., Vella, G. D., Lacerenza, D., Raddi, S., Aneli, S., Bogale, A. L., Kidane, E. M., Yizengaw, A., Getaneh, Y., et al. (2021) · Forensic Science International Genetics · doi:10.1016/j.fsigen.2021.102618 · Cited by 12
Genetic population study of Y-chromosome markers in Benin and Ivory Coast ethnic groups
Fortes‐Lima, C., Brucato, N., Croze, M., Bellis, G., Schiavinato, S., Massougbodji, A., Migot‐Nabias, F., & Dugoujon, J. (2015) · Forensic Science International Genetics · doi:10.1016/j.fsigen.2015.07.021 · Cited by 12
Genetic Diversity and Molecular Epidemiology of HIV Transmission
Castro‐Nallar, E., Crandall, K. A., & Pérez‐Losada, M. (2012) · Future Virology · doi:10.2217/fvl.12.4 · Cited by 13
Africa from MIS 6-2: The Florescence of Modern Humans
Stewart, B. A., & Jones, S. (2016) · Vertebrate paleobiology and paleoanthroplogy series/Vertebrate paleobiology and paleoanthropology series · doi:10.1007/978-94-017-7520-5_1 · Cited by 12
The timing of mandibular tooth formation in two African groups
Elamin, F., Hector, M., & Liversidge, H. M. (2016) · Annals of Human Biology · doi:10.1080/03014460.2016.1213313 · Cited by 12
“have extensive genetic diversity (Tishkoff et al., 2009) and”
Interview with Sarah Tishkoff: Perspectives for Genetic Research in African Populations
Destro‐Bisol, G. (2011) · Human Biology · doi:10.3378/027.083.0505 · Cited by 12
Galinsky, K. J., Bhatia, G., Loh, P., Georgiev, S., Mukherjee, S., Patterson, N. J., & Price, A. L. (2015) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/018143 · Cited by 13
Charting a landmark-driven path forward for population genetics and ancient DNA research in Africa
Sawchuk, E., Sirak, K. A., Manthi, F. K., Ndiema, E., Ogola, C. A., Prendergast, M. E., Reich, D., Aluvaala, E., Ayodo, G., Badji, L., et al. (2024) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2024.05.019 · Cited by 11
Self-citationA temporal cortex cell atlas highlights gene expression dynamics during human brain maturation
Steyn, C., Mishi, R. D., Fillmore, S., Verhoog, M. B., More, J., Rohlwink, U. K., Melvill, R., Butler, J. T., Enslin, N., Jacobs, M., et al. (2024) · Nature Genetics · doi:10.1038/s41588-024-01990-6 · Cited by 13
Evolution of long scalp hair in humans
Chang, L., Plikus, M. V., Jablonski, N. G., & Lin, S. (2025) · British Journal of Dermatology · doi:10.1093/bjd/ljae456 · Cited by 15
“25,26 The timing and genetic bases of diverse scalp hair forms, including straight hair, among dispersing AMH populations remain unclear.”
Permanent tooth emergence: Timing and sequence in a sample of Black Southern African children
Esan, T. A., Mothupi, K. A., & Schepartz, L. A. (2018) · American Journal of Physical Anthropology · doi:10.1002/ajpa.23714 · Cited by 11
Gene connectivity and enzyme evolution in the human metabolic network
Dobón, B., Montanucci, L., Peretó, J. G., Bertranpetit, J., & Laayouni, H. (2019) · Biology Direct · doi:10.1186/s13062-019-0248-7 · Cited by 11
Multiple Sclerosis in Black and Hispanic Populations
Williams, M. J., Orlando, C., Akisanya, J., & Amezcua, L. (2023) · Neurologic Clinics · doi:10.1016/j.ncl.2023.06.005 · Cited by 11
Müller, S. A., Amoah, S., Meese, S., Spranger, J., & Mockenhaupt, F. P. (2015) · Tropical Medicine & International Health · doi:10.1111/tmi.12530 · Cited by 11
“In comparison with African Americans, most individuals of African ancestry in Europe have a lesser degree of Caucasian admixture [20], a more recent migration history, and thus a lower rate of acculturation.”
BackgroundLiu, X., Saw, W., Ali, M. I., Ong, R. T., & Teo, Y. (2014) · BMC Genomics · doi:10.1186/1471-2164-15-332 · Cited by 11
“This situation is similar to that present in the Africa continent [1].”
ResultPelvic stress injuries in a small‐bodied forager
Pfeiffer, S. (2011) · International Journal of Osteoarchaeology · doi:10.1002/oa.1176 · Cited by 11
Priority pharmacogenetics for the African continent: focus on CYP450
Alessandrini, M., & Pepper, M. S. (2014) · Pharmacogenomics · doi:10.2217/pgs.13.252 · Cited by 11
The Craniometric Implications of a Complex Population History in South Africa
Stull, K. E., Kenyhercz, M. W., Tise, M. L., L’Abbé, E. N., & Tuamsuk, P. (2016) · Elsevier eBooks · doi:10.1016/b978-0-12-801966-5.00013-5 · Cited by 12
Dispersal and speciation: The cross Atlantic relationship of two parasitic cnidarians
Dnyansagar, R., Zimmermann, B., Moran, Y., Praher, D., Sundberg, P., Møller, L. F., & Technau, U. (2018) · Molecular Phylogenetics and Evolution · doi:10.1016/j.ympev.2018.04.035 · Cited by 11
Matume, N. D., Tebit, D. M., Gray, L. R., Turner, S., Rekosh, D. M., Bessong, P. O., & Hammarskjöld, M. (2019) · BMC Medical Genetics · doi:10.1186/s12881-018-0740-4 · Cited by 11
Metadata
- Authors
- Tishkoff, S. A., Reed, F. A., Friedlaender, F. R., Ehret, C., Ranciaro, A., Froment, A., Hirbo, J. B., Awomoyi, A. A., Bodo, J.-M., Doumbo, O., Ibrahim, M., Juma, A. T., Kotze, M. J., Lema, G., Moore, J. H., Mortensen, H., Nyambo, T. B., Omar, S. A., Powell, K., Pretorius, G. S., Smith, M. W., Thera, M. A., Wambebe, C., Weber, J. L., & Williams, S. M.
- Affiliations
- University of Maryland, College Park (US)
- Niche, Nutrition, Cancer et métabolisme oxydatif (FR)
- University of California, Los Angeles (US)
- University of Ferrara (IT)
- Muséum national d'Histoire naturelle (FR)
- Ministry of Scientific Research and Innovation (CM)
- University of Bamako (ML)
- University of Khartoum (SD)
- Stellenbosch University (ZA)
- Muhimbili University of Health and Allied Sciences (TZ)
- Departments of Genetics and Community and Family Medicine, Dartmouth Medical School, Lebanon, NH 03756, USA.
- Kenya Medical Research Institute (KE)
- National Cancer Institute (US)
- International Biomedical Research in Africa, Abuja, Nigeria.
- Marshfield Clinic Research Foundation (US)
- Vanderbilt University (US)
- Corresponding author
- Tishkoff, Sarah A.
- Reed, Floyd A.
- Friedlaender, Françoise R.
- Ranciaro, Alessia
- Froment, Alain
- Awomoyi, Agnes A.
- Mortensen, Holly
- Powell, Kweli
- ORCID
- Venue
- Science
- Published
- 2009-05-22
- Volume
- 324
- Issue
- 5930
- Pages
- 1035-1044
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- PMC
- PMC2947357
- OpenAlex
- W2129316818
- Cited by
- 1,573
- References
- 60
- Citations by year
- 2026: 65 · 2025: 98 · 2024: 56 · 2023: 69 · 2022: 69 · 2021: 85 · 2020: 79 · 2019: 88 · 2018: 88 · 2017: 84 · 2016: 89 · 2015: 102 · 2014: 119 · 2013: 93 · 2012: 123
- FWCI
- 75.46
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- IHI Repository (acceptedVersion)
- PubMed Central (acceptedVersion)
- Max Planck Institute for Plasma Physics (submittedVersion)
- IRIS Research product catalog (Sapienza University of Rome) (submittedVersion)
- MPG.PuRe (Max Planck Society) (submittedVersion)
- Funders
- National Institutes of Health (n01co12400-79-0-22)
- National Heart, Lung, and Blood Institute (R01 HL65234, R01HL065234)
- National Human Genome Research Institute (F32HG03801, F32HG003801)
- National Cancer Institute (N01-CO-012400)
- National Institute of General Medical Sciences (R01GM083606, R01GM076637)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Forensic and Genetic Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Social Sciences › Anthropology › Race, Genetics, and Society
- Keywords
- African American ancestry, admixture, microsatellite markers, InDel markers, Khoesan, Pygmies, European ancestry, migration history, self-reported ethnicity
- MeSH terms
- Africa, Bayes Theorem, Black or African American, Emigration and Immigration, Ethnicity, Genotype, Geography, Humans, Language, Phylogeny, Genetic Variation, Cluster Analysis, Microsatellite Repeats, Polymorphism, Single Nucleotide, Principal Component Analysis, Black People, Racial Groups, Gene Flow, INDEL Mutation
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