The DOI matches its Crossref record; 151 of the 151 references it cites were found in a registry or an index.
Early Neolithic genomes from the eastern Fertile Crescent
Open accessAbstract
Near Eastern genomes from Iran: The genetic composition of populations in Europe changed during the Neolithic transition from hunting and gathering to farming. To better understand the origin of modern populations, Broushaki et al. sequenced ancient DNA from four individuals from the Zagros region of present-day Iran, representing the early Neolithic Fertile Crescent. These individuals unexpectedly were not ancestral to early European farmers, and their genetic structures did not contribute significantly to those of present-day Europeans. These data indicate that a parallel Neolithic transition probably resulted from structured farming populations across southwest Asia. Science , this issue p. 499
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“Previous genome-wide ancient DNA studies from the Near East have revealed that at the time when agriculture developed, populations from Anatolia, Iran, and the Levant were approximately as genetically differentiated from each other as present-day Europeans and East Asians are today24,25.”
From Ancient DNA from Chalcolithic Israel reveals the role of population mixture in cultural transformation (2018) · cites this paper as [25]
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The Sequence Alignment/Map format and SAMtools
Li, H., Handsaker, B., Wysoker, A., Fennell, T., Ruan, J., Homer, N., Marth, G., Abecasis, G., Durbin, R., & 1000 Genome Project Data Processing Subgroup (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp352 · Cited by 62,041
Fast and accurate short read alignment with Burrows-Wheeler transform
Li, H., & Durbin, R. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp324 · Cited by 58,607
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.
Tamura, K., Stecher, G., Peterson, D., Filipski, A., & Kumar, S. (2013) · Molecular biology and evolution · doi:10.1093/molbev/mst197 · Cited by 41,174
PLINK: a tool set for whole-genome association and population-based linkage analyses.
Purcell, S., Neale, B., Todd-Brown, K., Thomas, L., Ferreira, M. A. R., Bender, D., Maller, J., Sklar, P., de Bakker, P. I. W., Daly, M. J., et al. (2007) · The American Journal of Human Genetics · doi:10.1086/519795 · Cited by 34,089
A global reference for human genetic variation
The 1000 Genomes Project Consortium, authors, C., Auton, A., Abecasis, G. R., Steering committee, Altshuler, D. M., Durbin, R. M., Abecasis, G. R., Bentley, D. R., Chakravarti, A., et al. (2015) · Nature · doi:10.1038/nature15393 · Cited by 18,247
Second-generation PLINK: rising to the challenge of larger and richer datasets
Chang, C. C., Chow, C. C., Tellier, L. C., Vattikuti, S., Purcell, S. M., & Lee, J. J. (2015) · Gigascience · doi:10.1186/s13742-015-0047-8 · Cited by 12,709
A framework for variation discovery and genotyping using next-generation DNA sequencing data
DePristo, M. A., Banks, E., Poplin, R. E., Garimella, K. V., Maguire, J., Hartl, C., Philippakis, A., del Angel, G., Rivas, M. A., Hanna, M., et al. (2011) · Nature Genetics · doi:10.1038/ng.806 · Cited by 11,457
ANGSD: Analysis of Next Generation Sequencing Data
Korneliussen, T. S., Albrechtsen, A., & Nielsen, R. (2014) · BMC Bioinformatics · doi:10.1186/s12859-014-0356-4 · Cited by 2,982
Ancient Admixture in Human History
Patterson, N., Moorjani, P., Luo, Y., Mallick, S., Rohland, N., Zhan, Y., Genschoreck, T., Webster, T., & Reich, D. (2012) · Genetics · doi:10.1534/genetics.112.145037 · Cited by 2,848
The complete genome sequence of a Neanderthal from the Altai Mountains
Prüfer, K., Racimo, F., Patterson, N., Jay, F., Sankararaman, S., Sawyer, S., Heinze, A., Renaud, G., Sudmant, P. H., de Filippo, C., et al. (2014) · Nature · doi:10.1038/nature12886 · Cited by 2,254
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Research works printed but not linked: 17
- J. Pullar Tepe Abdul Hosein: A Neolithic Site in Western Iran Excavations 1978 (BAR International Series 563 Oxford 1990).
- Pullar J., Tepe Abdul Hossein. Iran 17, 153–155 (1979).
- P. Mortensen Excavations at Tepe Guran. The Neolithic Period (Acta Iranica 2014) vol. 55.
- P. E. L. Smith Reflections on four seasons of excavations at Tappeh Ganj Dareh in Proceedings of the IVth Annual Symposium on Archaeological Research in Iran F. Bagherzadeh Ed. (Iranian Center for Archaeological Research Tehran 1976) pp. 11–22.
- B. Hesse thesis Columbia University (1977).
- M. A. Zeder A view from the Zagros: New perspectives on livestock domestication in the Fertile Crescent in First Steps of Animal Domestication J.-D. Vigne J. Peters D. Helmer Eds. (Oxbow Oxford 2005) pp. 125–146.
- F. Hole thesis University of Michigan (1977).
- H. B. J. Peters G. Grupe K. Schmidt N. Pöllath The long and winding road: Ungulate exploitation and domestication in Early Neolithic Anatolia (10 00-7 000 cal.BC) in The Origins and Spread of Domestic Animals in Southwest Asia and Europe J. C. S. Colledge K. Dobney K. Manning S. Shennan Eds. (Left Coast Press Walnut Creek CA 2013) pp. 83–114.
- Roustaei K., An emerging picture of the Neolithic of Northeast Iran. Iranica Antiqua 51, 21–56 (2016).
- K. O. Lorentz Ubaid headshaping: Negotiations of identity through physical appearance? in Beyond the Ubaid: Transformation and Integration in the Late Prehistoric Societies of the Middle East R. Carter G. Philip Eds. (Oriental Institute of Chicago Chicago 2010) pp. 125–147.
- R. Hubbard Archaeobotany of Abdul Hosein in Tepe Abdul Hosein: A Neolithic Site in Western Iran Excavations 1978 (BAR International Oxford 1990) pp. 217–222.
- M. Trotter Estimation of stature from intact long limb bones in Personal Identification in Mass Disasters T. D. Steward Ed. (Smithsonian Institution Washington DC 1970) pp. 71–83.
- Ungar P. S. Grine F. E. Teaford M. F. Pérez-Pérez A. A review of interproximal wearid3046373
- P. Selinsky thesis Univ. of Pennsylvania (2009).
- Danti M., Cifarelli M., Iron I. I., Warrior burials at Hasanlu Tepe, Iran. Iranica Antiqua 50, 61–157 (2015).
- M. Cifarelli Personal ornaments at Hasanlu Iran in Polish Archaeology in the Mediterranean 23/2 Special Studies: Beyond Ornamentation. Jewelry as an Aspect of Material Culture in the Ancient Near East A. Golani Z. Wygnańska Eds. (2014) pp. 297–316.
- G. Müldner Isotope analysis of animal bone in The Earliest Neolithic of Iran: 2008 Excavations at Sheikh-e Abad and Jani. R. Matthews W. Matthews Y. Mohammadifar Eds. (Oxbow Books 2013) · DOI
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Metadata
- Authors
- Broushaki, F., Thomas, M. G., Link, V., López, S., van Dorp, L., Kirsanow, K., Hofmanová, Z., Diekmann, Y., Cassidy, L. M., Díez-del-Molino, D., Kousathanas, A., Sell, C., Robson, H. K., Martiniano, R., Blöcher, J., Scheu, A., Kreutzer, S., Bollongino, R., Bobo, D., Davoudi, H., Munoz, O., Currat, M., Abdi, K., Biglari, F., Craig, O. E., Bradley, D. G., Shennan, S., Veeramah, K. R., Mashkour, M., Wegmann, D., Hellenthal, G., & Burger, J.
- Affiliations
- Johannes Gutenberg University Mainz (DE)
- University College London (GB)
- SIB Swiss Institute of Bioinformatics (CH)
- Department of Genetics, Evolution and Environment, University College London, London WC1E 6BT, UK.
- Trinity College Dublin (IE)
- University of York (GB)
- Stony Brook University (US)
- Tarbiat Modares University (IR)
- UMR 7041 ArScAn-VEPMO, Maison de l’Archéologie et de l’Ethnologie, 21 allée de l’Université, 92023 Nanterre, France.
- University of Geneva (CH)
- University of California, Irvine (US)
- Paleolithic Department, National Museum of Iran, 113617111, Tehran, Iran.
- Centre National de la Recherche Scientifique (FR)
- Palaeogenetics Group, Johannes Gutenberg University Mainz, 55099 Mainz, Germany.
- Corresponding author
- Wegmann, Daniel
- Hellenthal, Garrett
- ORCID
- Thomas, Mark G.
- Link, Vivian
- López, Saioa
- Hofmanová, Zuzana
- Diekmann, Yoan
- Cassidy, Lara M.
- Kousathanas, Athanasios
- Robson, Harry K.
- Martiniano, Rui
- Blöcher, Jens
- Scheu, Amelie
- Kreutzer, Susanne
- Bobo, Dean
- Davoudi, Hossein
- Currat, Mathias
- Abdi, Kamyar
- Biglari, Fereidoun
- Craig, Oliver E.
- Bradley, Daniel G.
- Shennan, Stephen
- Veeramah, Krishna R.
- Mashkour, Marjan
- Wegmann, Daniel
- Hellenthal, Garrett
- Venue
- Science
- Published
- 2016-07-29
- Volume
- 353
- Issue
- 6298
- Pages
- 499-503
- ISSN
- 0036-8075 (ISSN-L)
- 1095-9203
- PMC
- PMC5113750
- OpenAlex
- W2461271891
- Cited by
- 288
- References
- 151
- Citations by year
- 2026: 17 · 2025: 22 · 2024: 31 · 2023: 17 · 2022: 36 · 2021: 33 · 2020: 22 · 2019: 41 · 2018: 37 · 2017: 26 · 2016: 5
- FWCI
- 29.32
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Science (publishedVersion)
- PubMed (publishedVersion)
- Archive ouverte UNIGE (University of Geneva) (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- White Rose Research Online (University of Leeds, The University of Sheffield, University of York) (acceptedVersion)
- HAL (submittedVersion, other-oa)
- UCL Discovery (University College London) (submittedVersion)
- Archive ouverte UNIGE (University of Geneva) (submittedVersion, cc-by)
- Funders
- Deutsche Forschungsgemeinschaft (DFG) (BO 4119/1)
- Swiss NSF (31003A_156853, 31003A_149920)
- Biotechnology and Biological Sciences Research Council (BB/L009382/1)
- Engineering and Physical Sciences Research Council (EP/F500351/1)
- Wellcome Trust
- Royal Society (098386/Z/12/Z)
- National Institute for Health Research University College London Hospitals Biomedical Research Centre
- Wellcome Trust Senior Research Fellowship
- DFG
- INST (247/602-1 FUGG)
- Irish Research Council (GOIPG/2013/1219)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Forensic and Genetic Research
- Social Sciences › Archeology › Archaeology and ancient environmental studies
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Keywords
- Early Neolithic, Zagros region, ancient genomes, Neolithic farmers, hunter-gatherers, origins of agriculture, population structure
- MeSH terms
- Afghanistan, Agriculture, Ethnicity, Humans, Iran, Pakistan, Genetic Variation, Genome, Human, White People, History, Ancient, Human Migration
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