Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil

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    2022
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  93. Epidemiological characterization of SARS-CoV-2 variants in children over the four COVID-19 waves and correlation with clinical presentation
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  94. Longitudinal single-cell analysis of SARS-CoV-2–reactive B cells uncovers persistence of early-formed, antigen-specific clones
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  95. Introduction and transmission of SARS-CoV-2 lineage B.1.1.7, Alpha variant, in Denmark
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  96. Interacting Epidemics in Amazonian Brazil: Prior Dengue Infection Associated With Increased Coronavirus Disease 2019 (COVID-19) Risk in a Population-Based Cohort Study
    Vanessa C. Nicolete, Priscila T. Rodrigues, Igor Cavallini Johansen, Rodrigo M. Corder, Juliana Tonini, Marly Augusto Cardoso, Jaqueline Góes de Jesus, Ingra Morales Claro, Nuno Rodrigues Faria, Éster Cerdeira Sabino et al. · 2021 · Clinical Infectious Diseases
  97. Evolution, correlation, structural impact and dynamics of emerging SARS-CoV-2 variants
    Austin N. Spratt, Saathvik R. Kannan, Lucas T. Woods, Gary A. Weisman, Thomas P. Quinn, Christian L. Lorson, Anders B. Sönnerborg, Siddappa N. Byrareddy, Kamal Deep Singh · 2021 · Computational and Structural Biotechnology Journal
  98. Cross-reactivity of antibodies from non-hospitalized COVID-19 positive individuals against the native, B.1.351, B.1.617.2, and P.1 SARS-CoV-2 spike proteins
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  99. Rapid test to assess the escape of SARS-CoV-2 variants of concern
    Jacob T. Heggestad, Rhett J. Britton, David Kinnamon, Simone A. Wall, Daniel Y. Joh, Angus Hucknall, Lyra B. Olson, Jack G. Anderson, Anna Mazur, Cameron R. Wolfe et al. · 2021 · Science Advances
  100. Highly Neutralizing COVID-19 Convalescent Plasmas Potently Block SARS-CoV-2 Replication and Pneumonia in Syrian Hamsters
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