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Duodenal-Mucosal Bacteria Associated with Celiac Disease in Children
Open accessAbstract
Celiac disease (CD) is an immune-mediated enteropathy triggered by the ingestion of cereal gluten proteins. This disorder is associated with imbalances in the gut microbiota composition that could be involved in the pathogenesis of CD. The aim of this study was to characterize the composition and diversity of the cultivable duodenal mucosa-associated bacteria of CD patients and control children. Duodenal biopsy specimens from patients with active disease on a gluten-containing diet (n= 32), patients with nonactive disease after adherence to a gluten-free diet (n= 17), and controls (n= 8) were homogenized and plated on plate count agar, Wilkins-Chalgren agar, brain heart agar, or yeast, Casitone, and fatty acid agar. The isolates were identified by partial 16S rRNA gene sequencing. Renyi diversity profiles showed the highest diversity values for active CD patients, followed by nonactive CD patients and control individuals. Members of the phylum Proteobacteria were more abundant in patients with active CD than in the other child groups, while those of the phylum Firmicutes were less abundant. Members of the families Enterobacteriaceae and Staphylococcaceae, particularly the species Klebsiella oxytoca,Staphylococcus epidermidis, and Staphylococcus pasteuri, were more abundant in patients with active disease than in controls. In contrast, members of the family Streptococcaceae were less abundant in patients with active CD than in controls. Furthermore, isolates of the Streptococcus anginosus and Streptococcus mutans groups were more abundant in controls than in both CD patient groups, regardless of inflammatory status. The findings indicated that the disease is associated with the overgrowth of possible pathobionts that exclude symbionts or commensals that are characteristic of the healthy small intestinal microbiota.
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“Most studies, but not all,48 have found significant differences between healthy children and children with CD in the duodenal49,50 and oral51 microbial populations.”
From The Gut Microbiome and the Brain (2014) · cites this paper as [49]
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Cites
Diversity of the Human Intestinal Microbial Flora
Eckburg, P. B., Bik, E. M., Bernstein, C. N., Purdom, E., Dethlefsen, L., Sargent, M., Gill, S. R., Nelson, K. E., & Relman, D. A. (2005) · Science · doi:10.1126/science.1110591 · Cited by 7,913
Frank, D. N., St. Amand, A. L., Feldman, R. A., Boedeker, E. C., Harpaz, N., & Pace, N. R. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0706625104 · Cited by 4,611
Preparation of Genomic DNA from Bacteria
Wilson, K. J. (2001) · Current Protocols in Molecular Biology · doi:10.1002/0471142727.mb0204s56 · Cited by 2,113
Walker‐Smith, J. A., Guandalini, S., Schmitz, J., Shmerling, D. H., & Visakorpi, J. K. (1990) · Archives of Disease in Childhood · doi:10.1136/adc.65.8.909 · Cited by 1,492
Ott, S. J., Musfeldt, M., Wenderoth, D. F., Hampe, J., Brant, O., Fölsch, U. R., Timmis, K. N., & Schreiber, S. (2004) · Gut · doi:10.1136/gut.2003.025403 · Cited by 1,311
Multiple common variants for celiac disease influencing immune gene expression
Dubois, P. C. A., Trynka, G., Franke, L., Hunt, K. A., Romanos, J., Curtotti, A., Zhernakova, A., Heap, G., Ádány, R., Aromaa, A. J., et al. (2010) · Nature Genetics · doi:10.1038/ng.543 · Cited by 1,027
Swidsinski, A., Weber, J., Loening-Baucke, V., Hale, L. P., & Lochs, H. (2005) · Journal of Clinical Microbiology · doi:10.1128/jcm.43.7.3380-3389.2005 · Cited by 894
Molecular Monitoring of Succession of Bacterial Communities in Human Neonates
Favier, C. F., Vaughan, E. E., de Vos, W. M., & Akkermans, A. D. L. (2002) · Applied and Environmental Microbiology · doi:10.1128/aem.68.1.219-226.2002 · Cited by 859
IBD—what role do Proteobacteria play?
Mukhopadhya, I., Hansen, R., El-Omar, E. M., & Hold, G. L. (2012) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/nrgastro.2012.14 · Cited by 810
The role of pH in determining the species composition of the human colonic microbiota
Duncan, S. H., Louis, P., Thomson, J. M., & Flint, H. J. (2009) · Environmental Microbiology · doi:10.1111/j.1462-2920.2009.01931.x · Cited by 786
Revised criteria for diagnosis of coeliac disease
Walker‐Smith, J. A., Guandalini, S., Schmitz, J., Shmerling, D. H., & Visakorpi, J. K. (1990) · Cited by 599
Lepage, P., Häsler, R., Spehlmann, M. E., Rehman, A., Žvirblienė, A., Begun, A., Ott, S. J., Kupčinskas, L., Dore, J. M., Raedler, A., et al. (2011) · Gastroenterology · doi:10.1053/j.gastro.2011.04.011 · Cited by 592
Gophna, U., Sommerfeld, K., Gophna, S., Doolittle, W. F., & van Zanten, S. J. O. V. (2006) · Journal of Clinical Microbiology · doi:10.1128/jcm.01004-06 · Cited by 570
Stene, L. C., Honeyman, M. C., Hoffenberg, E. J., Haas, J. E., Sokol, R. J., Emery, L. M., Taki, I., Norris, J. M., Erlich, H. A., Eisenbarth, G. S., et al. (2006) · The American Journal of Gastroenterology · doi:10.1111/j.1572-0241.2006.00741.x · Cited by 565
Diversity of the human gastrointestinal tract microbiota revisited
Rajilić‐Stojanović, M., Smidt, H., & De Vos, W. M. (2007) · Environmental Microbiology · doi:10.1111/j.1462-2920.2007.01369.x · Cited by 559
Comparison of different methods for diversity ordering
Tóthmérész, B. (1995) · Journal of Vegetation Science · doi:10.2307/3236223 · Cited by 545
Mode and place of delivery, gastrointestinal microbiota, and their influence on asthma and atopy
van Nimwegen, F. A., Penders, J., Stobberingh, E. E., Postma, D. S., Koppelman, G. H., Kerkhof, M., Reijmerink, N. E., Dompeling, E., van den Brandt, P. A., Ferreira, I., et al. (2011) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2011.07.027 · Cited by 493
Nilsen, E. M., Jahnsen, F. L., Lundin, K. E. A., Johansen, F., FAUSA, O., Sollid, L. M., Jahnsen, J., Scott, H., & Brandtzaeg, P. (1998) · Gastroenterology · doi:10.1016/s0016-5085(98)70134-9 · Cited by 471
Hayashi, H., Sakamoto, M., & Benno, Y. (2002) · Microbiology and Immunology · doi:10.1111/j.1348-0421.2002.tb02731.x · Cited by 458
Satokari, R. M., Vaughan, E. E., Akkermans, A. D. L., Saarela, M., & de Vos, W. M. (2001) · Applied and Environmental Microbiology · doi:10.1128/aem.67.2.504-513.2001 · Cited by 444
Espey, M. G. (2013) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2012.10.554 · Cited by 396
Imbalance in the composition of the duodenal microbiota of children with coeliac disease
Nadal, I., Donant, E., Ribes‐Koninckx, C., Calabuig, M., & Sanz, Y. (2007) · Journal of Medical Microbiology · doi:10.1099/jmm.0.47410-0 · Cited by 396
Self-citationSpecific duodenal and faecal bacterial groups associated with paediatric coeliac disease
Collado, M. C., Donat, E., Ribes-Koninckx, C., Calabuig, M., & Sanz, Y. (2009) · Journal of Clinical Pathology · doi:10.1136/jcp.2008.061366 · Cited by 354
Self-citationMucosal and Invading Bacteria in Patients with Inflammatory Bowel Disease Compared with Controls
Kleessen, B., Kroesen, A. J., Buhr, H. J., & Blaut, M. (2002) · Scandinavian Journal of Gastroenterology · doi:10.1080/003655202320378220 · Cited by 351
De Palma, G., Nadal, I., Medina, M., Donat, E., Ribes-Koninckx, C., Calabuig, M., & Sanz, Y. (2010) · BMC Microbiology · doi:10.1186/1471-2180-10-63 · Cited by 330
Self-citationDi Cagno, R., De Angelis, M., De Pasquale, I., Ndagijimana, M., Vernocchi, P., Ricciuti, P., Gagliardi, F., Laghi, L., Crecchio, C., Guerzoni, M. E., et al. (2011) · BMC Microbiology · doi:10.1186/1471-2180-11-219 · Cited by 317
The intestinal microbiota and chronic disorders of the gut
Dupont, A. W., & DuPont, H. L. (2011) · Nature Reviews Gastroenterology & Hepatology · doi:10.1038/nrgastro.2011.133 · Cited by 310
Coeliac disease: an update for pathologists
Dickson, B. C., Streutker, C., & Chetty, R. (2006) · Journal of Clinical Pathology · doi:10.1136/jcp.2005.035345 · Cited by 300
Advances in Celiac Disease and Gluten-Free Diet
Niewinski, M. M. (2008) · Journal of the American Dietetic Association · doi:10.1016/j.jada.2008.01.011 · Cited by 280
A distinctive 'microbial signature' in celiac pediatric patients
Schippa, S., Iebba, V., Barbato, M., Nardo, G. D., Totino, V., Checchi, M. P., Longhi, C., Maiella, G., Cucchiara, S., & Conte, M. (2010) · BMC Microbiology · doi:10.1186/1471-2180-10-175 · Cited by 259
McLoughlin, R. M., & Mills, K. H. G. (2011) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2011.02.012 · Cited by 209
Nistal, E., Caminero, A., Vivas, S., Morales, J., de Miera, L. E. S., Rodríguez-Aparicio, L. B., & Casqueiro, J. (2012) · Biochimie · doi:10.1016/j.biochi.2012.03.025 · Cited by 175
Sanz, Y., Sánchez, E., Marzotto, M., Calabuig, M., Torriani, S., & Dellaglio, F. (2007) · FEMS Immunology & Medical Microbiology · doi:10.1111/j.1574-695x.2007.00337.x · Cited by 173
Self-citationOu, G., Hedberg, M., Hörstedt, P., Baranov, V., Forsberg, G., Drobni, M., Sandström, O., Nyunt Wai, S., Johansson, I., Hammarström, M.-L., et al. (2009) · American Journal of Gastroenterology · doi:10.1038/ajg.2009.524 · Cited by 169
The Biochemical Basis of Celiac Disease
Wieser, H., & Koehler, P. (2008) · Cereal Chemistry · doi:10.1094/cchem-85-1-0001 · Cited by 160
Laparra, J. M., Olivares, M., Gallina, O., & Sanz, Y. (2012) · PLoS ONE · doi:10.1371/journal.pone.0030744 · Cited by 153
Self-citationPathomechanisms in celiac disease
Koning, F., Schuppan, D., Cerf–Bensussan, N., & Sollid, L. M. (2005) · Best Practice & Research Clinical Gastroenterology · doi:10.1016/j.bpg.2005.02.003 · Cited by 151
Intestinal dysbiosis in inflammatory bowel disease
Kaur, N. J., Chen, C.-C., Luther, J., & Kao, J. Y. (2011) · Gut Microbes · doi:10.4161/gmic.2.4.17863 · Cited by 145
Role of Intestinal Bacteria in Gliadin-Induced Changes in Intestinal Mucosa: Study in Germ-Free Rats
Cinová, J., Palma, G. D., Štëpánková, R., Kofroňová, O., Kverka, M., Sanz, Y., & Tučková, L. (2011) · PLoS ONE · doi:10.1371/journal.pone.0016169 · Cited by 133
Self-citationLaparra, J. M., & Sanz, Y. (2010) · Journal of Cellular Biochemistry · doi:10.1002/jcb.22459 · Cited by 131
Self-citationAdaptive and innate immune responses in celiac disease
Gianfrani, C., Auricchio, S., & Troncone, R. (2005) · Immunology Letters · doi:10.1016/j.imlet.2005.02.017 · Cited by 125
Characterization of IL-17A–Producing Cells in Celiac Disease Mucosa
Monteleone, I., Sarra, M., Blanco, G. D. V., Paoluzi, O. A., Franzè, E., Fina, D., Fabrizi, A., MacDonald, T. T., Pallone, F., & Monteleone, G. (2010) · The Journal of Immunology · doi:10.4049/jimmunol.0901919 · Cited by 122
Intestinal Bacteroides species associated with coeliac disease
Sánchez, E., Donat, E., Ribes‐Koninckx, C., Calabuig, M., & Sanz, Y. (2010) · Journal of Clinical Pathology · doi:10.1136/jcp.2010.076950 · Cited by 95
Self-citationThe Role of Bacteria in the Pathogenesis of Inflammatory Bowel Disease
Friswell, M. K., Campbell, B. J., & Rhodes, J. M. (2010) · Gut and Liver · doi:10.5009/gnl.2010.4.3.295 · Cited by 91
De Palma, G., Cinova, J., Stepankova, R., Tuckova, L., & Sanz, Y. (2009) · Journal of Leukocyte Biology · doi:10.1189/jlb.0709471 · Cited by 90
Self-citationSánchez, E., Nadal, I., Donat, E., Ribes‐Koninckx, C., Calabuig, M., & Sanz, Y. (2008) · BMC Gastroenterology · doi:10.1186/1471-230x-8-50 · Cited by 83
Self-citationGut matters: Microbe-host interactions in allergic diseases
Hörmannsperger, G., Clavel, T., & Haller, D. (2012) · Journal of Allergy and Clinical Immunology · doi:10.1016/j.jaci.2011.12.993 · Cited by 74
Oral Findings and Salivary Parameters in Children with Celiac Disease: A Preliminary Study
Acar, S., Yetkıner, A. A., Ersin, N. K., Önçağ, Ö., Aydoğdu, S., & Arıkan, Ç. (2011) · Medical Principles and Practice · doi:10.1159/000331794 · Cited by 72
Characterization of Gliadin-Specific Th17 Cells from the Mucosa of Celiac Disease Patients
Fernández, S., Molina, I. J., Romero, P., González, R., Peña, J., Sánchez, F., Reynoso, F. R., Pérez-Navero, J. L., Estévez, O. A., Ortega, C., et al. (2011) · The American Journal of Gastroenterology · doi:10.1038/ajg.2010.465 · Cited by 67
Intestinal Staphylococcus spp. and virulent features associated with coeliac disease
Sánchez, E., Ribes‐Koninckx, C., Calabuig, M., & Sanz, Y. (2012) · Journal of Clinical Pathology · doi:10.1136/jclinpath-2012-200759 · Cited by 62
Self-citationReview: Tools for the tract: understanding the functionality of the gastrointestinal tract
Kovatcheva‐Datchary, P., Zoetendal, E. G., Venema, K., de Vos, W. M., & Smidt, H. (2009) · Therapeutic Advances in Gastroenterology · doi:10.1177/1756283x09337646 · Cited by 39
Coeliac disease and the risk of infections: Table 1
Walters, J. R. F., Bamford, K. B., & Ghosh, S. (2008) · Gut · doi:10.1136/gut.2008.151571 · Cited by 20
Novel Perspectives in Celiac Disease Therapy
Sanz, Y. (2009) · Mini-Reviews in Medicinal Chemistry · doi:10.2174/1389557510909030359 · Cited by 17
Self-citationAnaerobic facultative bacteria isolated from the gut of rabbits fed different diets
Canganella, F., Zirletta, G., Gualterio, L., MASSA, S., & Trovatelli, L. D. (1992) · Zentralblatt für Mikrobiologie · doi:10.1016/s0232-4393(11)80384-7 · Cited by 10
Dubreuil, L., Houcke, I., & Leroy, I. (1996) · PubMed · Cited by 5
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Metadata
- Authors
- Sánchez, E., Donat, E., Ribes-Koninckx, C., Fernández-Murga, M. L., & Sanz, Y.
- Affiliations
- Consejo Superior de Investigaciones Científicas (ES)
- Hospital Universitari i Politècnic La Fe (ES)
- Hospital Universitario La Fe, Valencia, Spain
- Microbial Ecology and Nutrition Research Group, Institute of Agrochemistry and Food Technology, National Research Council (IATA-CSIC), Valencia, Spain
- Venue
- Applied and Environmental Microbiology
- Publisher
- American Society for Microbiology
- Published
- 2013-09-15
- Volume
- 79
- Issue
- 18
- Pages
- 5472-5479
- ISSN
- 0099-2240 (ISSN-L)
- 1098-5336
- PMC
- PMC3754165
- OpenAlex
- W2127055805
- Cited by
- 171
- References
- 55
- Citations by year
- 2026: 5 · 2025: 7 · 2024: 17 · 2023: 10 · 2022: 10 · 2021: 18 · 2020: 18 · 2019: 18 · 2018: 11 · 2017: 12 · 2016: 17 · 2015: 12 · 2014: 15 · 2013: 1
- FWCI
- 6.72
- Type
- journal article
- Language
- en
- Open access
- green
- europepmc.org
- Locations
- Applied and Environmental Microbiology (publishedVersion)
- Europe PMC (PubMed Central) (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Danone
- Ministerio de Economía y Competitividad
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Medicine › Gastroenterology › Celiac Disease Research and Management
- Health Sciences › Medicine › Gastroenterology › Helicobacter pylori-related gastroenterology studies
- Keywords
- celiac disease, duodenal mucosa, gut microbiota, cultivable bacteria, pathobionts, Klebsiella oxytoca, Staphylococcus epidermidis, Streptococcus mutans, Streptococcus anginosus, Proteobacteria, Firmicutes, 16S rRNA gene sequencing, gluten-free diet, children, microbial diversity
- MeSH terms
- Bacteria, Bacteriological Techniques, Biopsy, Celiac Disease, Child, Child, Preschool, DNA, Bacterial, DNA, Ribosomal, Duodenum, Humans, Intestinal Mucosa, RNA, Ribosomal, 16S, Sequence Analysis, DNA, Biodiversity
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