The DOI matches its Crossref record; 61 of the 61 references it cites were found in a registry or an index.
Kinetics of Virus-Specific CD8+T Cells and the Control of Human Immunodeficiency Virus Infection
Open accessAbstract
Several primate models indicate that cytotoxic T lymphocyte-inducing vaccines may be unable to prevent human immunodeficiency virus infection but may have a long-term benefit in controlling viral replication and delaying disease progression. Here we show that analysis of the kinetics of antigen-specific CD8+T-cell expansion suggests a delay in activation following infection that allows unimpeded early viral replication. Viral kinetics do not differ between controls and vaccinees during this delay phase. An increase in virus-specific CD8+T-cell numbers around day 10 postinfection coincides with a slowing in viral replication in vaccinees and reduces peak viral loads by around 1 log. However, this response is too little too late to prevent establishment of persistent infection.
Overview
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Studies of the ability of memory T cells to control viral and bacterial growth suggest that both CD4+ T cells (in murine tuberculosis42) and CD8+ T cells (in simian immunodeficiency virus infection of macaques43,44) require an extended period of infection (7–10 days) before they are mobilized to control pathogen replication.”
From Prospects for durable immune control of SARS-CoV-2 and prevention of reinfection (2021) · cites this paper as [43]
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Citations
Cites
Prognosis in HIV-1 Infection Predicted by the Quantity of Virus in Plasma
Mellors, J. W., Rinaldo, C. R., Gupta, P., White, R. M., Todd, J. A., & Kingsley, L. (1996) · Science · doi:10.1126/science.272.5265.1167 · Cited by 2,658
Koup, R. A., Safrit, J. T., Cao, Y., Andrews, C. A., McLeod, G. X., Borkowsky, W., Farthing, C., & Ho, D. D. (1994) · Journal of Virology · doi:10.1128/jvi.68.7.4650-4655.1994 · Cited by 2,494
Control of Viremia in Simian Immunodeficiency Virus Infection by CD8 + Lymphocytes
Schmitz, J. E., Kuroda, M. J., Santra, S., Sasseville, V. G., Simon, M. A., Lifton, M. A., Rácz, P., Tenner‐Racz, K., Dalesandro, M. R., Scallon, B. J., et al. (1999) · Science · doi:10.1126/science.283.5403.857 · Cited by 2,167
Quantification of latent tissue reservoirs and total body viral load in HIV-1 infection
Chun, T.-W., Carruth, L., Finzi, D., Shen, X., DiGiuseppe, J. A., Taylor, H., Hermankova, M., Chadwick, K., Margolick, J., Quinn, T. C., et al. (1997) · Nature · doi:10.1038/387183a0 · Cited by 2,050
Borrow, P., Lewicki, H. A., Hahn, B. H., Shaw, G. M., & Oldstone, M. B. A. (1994) · Journal of Virology · doi:10.1128/jvi.68.9.6103-6110.1994 · Cited by 1,880
Wherry, E. J., Blattman, J. N., Murali‐Krishna, K., der Most, R. G. V., & Ahmed, R. (2003) · Journal of Virology · doi:10.1128/jvi.77.8.4911-4927.2003 · Cited by 1,645
Requirement for CD4 T Cell Help in Generating Functional CD8 T Cell Memory
Shedlock, D. J., & Shen, H. (2003) · Science · doi:10.1126/science.1082305 · Cited by 1,450
Jin, X., Bauer, D. E., Tuttleton, S., Lewin, S. R., Gettie, A., Blanchard, J., Irwin, C. E., Safrit, J. T., Mittler, J. E., Weinberger, L. S., et al. (1999) · The Journal of Experimental Medicine · doi:10.1084/jem.189.6.991 · Cited by 1,409
Self-citationDefective CD8 T Cell Memory Following Acute Infection Without CD4 T Cell Help
Sun, J. C., & Bevan, M. J. (2003) · Science · doi:10.1126/science.1083317 · Cited by 1,213
Shiver, J. W., Fu, T., Chen, L., Casimiro, D. R., Davies, M.-E., Evans, R. K., Zhang, Z., Simon, A. J., Trigona, W. L., Dubey, S. A., et al. (2002) · Nature · doi:10.1038/415331a · Cited by 1,173
Control of a Mucosal Challenge and Prevention of AIDS by a Multiprotein DNA/MVA Vaccine
Amara, R. R. (2001) · Science · doi:10.1126/science.1058915 · Cited by 1,110
Human immunodeficiency virus genetic variation that can escape cytotoxic T cell recognition
Phillips, R. E., Rowland-Jones, S. L., Nixon, D. F., Gotch, F. M., Edwards, J. P., Ogunlesi, A. O., Elvin, J. G., Rothbard, J. B., Bangham, C. R. M., Rizza, C. R., et al. (1991) · Nature · doi:10.1038/354453a0 · Cited by 1,015
Nowak, M. A., & May, R. M. (2000) · doi:10.1093/oso/9780198504184.001.0001 · Cited by 994
Dynamics of HIV infection of CD4+ T cells
Perelson, A. S., Kirschner, D. E., & de Boer, R. J. (1993) · Mathematical Biosciences · doi:10.1016/0025-5564(93)90043-a · Cited by 973
Self-citationVirus dynamics: Mathematical principles of immunology and virology
Nowak, M. A., & May, R. M. (2001) · Cited by 934
Barouch, D. H., Santra, S., Schmitz, J. E., Kuroda, M. J., Fu, T., Wagner, W., Bilska, M., Craiu, A., Zheng, X. X., Krivulka, G. R., et al. (2000) · Science · doi:10.1126/science.290.5491.486 · Cited by 881
HIV-specific CD8(+) T cells produce antiviral cytokines but are impaired in cytolytic function
Appay, V., Nixon, D. F., Donahoe, S. M., Gillespie, G. M. A., Dong, T., King, A., Ogg, G. S., Spiegel, H. M. L., Conlon, C., Spina, C. A., et al. (2000) · The Journal of Experimental Medicine · doi:10.1084/jem.192.1.63 · Cited by 871
Direct Observation of Vortex Dynamics in Superconducting Films with Regular Arrays of Defects
Harada, K., Kamimura, O., Kasai, H., Matsuda, T., Tonomura, A., & Moshchalkov, V. V. (1996) · Science · doi:10.1126/science.274.5290.1167 · Cited by 778
Gallimore, A., Glithero, A., Godkin, A. J., Tissot, A. C., Plückthun, A., Elliott, T. J., Hengartner, H., & Zinkernagel, R. M. (1998) · The Journal of Experimental Medicine · doi:10.1084/jem.187.9.1383 · Cited by 768
Allen, T. M., O’Connor, D. H., Jing, P., Dzuris, J. L., Mothé, B. R., Vogel, T. U., DUNPHY, E. B., Liebl, M. E., Emerson, C. L., Wilson, N. A., et al. (2000) · Nature · doi:10.1038/35030124 · Cited by 679
Virus-Specific CD8+ T Cells in Primary and Secondary Influenza Pneumonia
Flynn, K. J., Belz, G. T., Altman, J. D., Ahmed, R., Woodland, D. L., & Doherty, P. C. (1998) · Immunity · doi:10.1016/s1074-7613(00)80573-7 · Cited by 674
Eventual AIDS vaccine failure in a rhesus monkey by viral escape from cytotoxic T lymphocytes
Barouch, D. H., Kunstman, J., Kuroda, M. J., Schmitz, J. E., Santra, S., Peyerl, F. W., Krivulka, G. R., Beaudry, K. R., Lifton, M. A., Gorgone, D. A., et al. (2002) · Nature · doi:10.1038/415335a · Cited by 660
Cytotoxic T-cell memory without antigen
Lau, L. L., Jamieson, B. D., Somasundaram, T., & Ahmed, R. (1994) · Nature · doi:10.1038/369648a0 · Cited by 657
Quantitative Image Analysis of HIV-1 Infection in Lymphoid Tissue
Haase, A. T., Henry, K., Zupancic, M., Sedgewick, G. J., Faust, R. A., Melroe, H., Cavert, W. P., Gebhard, K. H., Staskus, K., Zhang, Z.-Q., et al. (1996) · Science · doi:10.1126/science.274.5289.985 · Cited by 599
Self-citationGain of Virulence Caused by Loss of a Gene in Murine Cytomegalovirus
Bubić, I., Wagner, M., Krmpotić, A., Saulig, T., Kim, S., Yokoyama, W. M., Jonjić, S., & Koszinowski, U. H. (2004) · Journal of Virology · doi:10.1128/jvi.78.14.7536-7544.2004 · Cited by 570
Musey, L. K., Hughes, J. P., Schacker, T. W., Shea, T., Corey, L., & McElrath, M. J. (1997) · New England Journal of Medicine · doi:10.1056/nejm199710303371803 · Cited by 517
Alexander‐Miller, M. A., Leggatt, G. R., & Berzofsky, J. A. (1996) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.93.9.4102 · Cited by 511
Ramratnam, B., Bonhoeffer, S., Binley, J. Μ., Hurley, A., Zhang, L., Mittler, J. E., Markowitz, M. H., Moore, J. P., Perelson, A. S., & Ho, D. D. (1999) · The Lancet · doi:10.1016/s0140-6736(99)02035-8 · Cited by 481
Self-citationMemory Inflation: Continuous Accumulation of Antiviral CD8+ T Cells Over Time
Karrer, U. W., Sierro, S. R., Wagner, M., Oxenius, A., Hengel, H., Koszinowski, U. H., Phillips, R. E., & Klenerman, P. (2003) · The Journal of Immunology · doi:10.4049/jimmunol.170.4.2022 · Cited by 444
Markowitz, M. H., Louie, M. J., Hurley, A., Sun, E., Mascio, M. D., Perelson, A. S., & Ho, D. D. (2003) · Journal of Virology · doi:10.1128/jvi.77.8.5037-5038.2003 · Cited by 399
Self-citationKoenig, S., Conley, A. J., Brewah, Y. A., Jones, G. M., Leath, S., BOOTS, L. J., Davey, V. J., Pantaleo, G., Demarest, J. F., Carter, C., et al. (1995) · Nature Medicine · doi:10.1038/nm0495-330 · Cited by 376
Increased Turnover of T Lymphocytes in HIV-1 Infection and Its Reduction by Antiretroviral Therapy
Mohri, H., Perelson, A. S., Tung, K. S., Ribeiro, R. M., Ramratnam, B., Markowitz, M. H., Kost, R. G., Hurley, Weinberger, L. S., Cesar, D., et al. (2001) · The Journal of Experimental Medicine · doi:10.1084/jem.194.9.1277 · Cited by 359
Self-citationAcute phase cytotoxic T lymphocyte escape is a hallmark of simian immunodeficiency virus infection
O’Connor, D. H., Allen, T. M., Vogel, T. U., Jing, P., DeSouza, I., Dodds, E. J., Dunphy, E. J., Melsaether, C., Mothé, B. R., Yamamoto, H., et al. (2002) · Nature Medicine · doi:10.1038/nm0502-493 · Cited by 357
Viral Dynamics of Acute HIV-1 Infection
Little, S. J., McLean, A. R., Spina, C. A., Richman, D. D., & Havlir, D. V. (1999) · The Journal of Experimental Medicine · doi:10.1084/jem.190.6.841 · Cited by 299
Compromised Influenza Virus-Specific CD8 + -T-Cell Memory in CD4 + -T-Cell-Deficient Mice
Belz, G. T., Wodarz, D., Diaz, G. M., Nowak, M. A., & Doherty, P. C. (2002) · Journal of Virology · doi:10.1128/jvi.76.23.12388-12393.2002 · Cited by 290
Nowak, M. A., Lloyd, A. L., Vásquez, G. M., Wiltrout, T. A., Wahl, L. M., Bischofberger, N., Williams, J. P., Kinter, A. L., Fauci, A. S., Hirsch, V. M., et al. (1997) · Journal of Virology · doi:10.1128/jvi.71.10.7518-7525.1997 · Cited by 283
Accessing Complexity: The Dynamics of Virus-Specific T Cell Responses
Doherty, P. C., & Christensen, J. P. (2000) · Annual Review of Immunology · doi:10.1146/annurev.immunol.18.1.561 · Cited by 279
Rees, W. A., Bender, J., Teague, T. K., Kedl, R. M., Crawford, F., Marrack, P., & Kappler, J. W. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.17.9781 · Cited by 263
A cellular calculus for signal integration by T cells
Gett, A. V., & Hodgkin, P. D. (2000) · Nature Immunology · doi:10.1038/79782 · Cited by 246
Kovacs, J. A., Lempicki, R. A., Sidorov, I. A., Adelsberger, J. W., Herpin, B. R., Metcalf, J. A., Sereti, I., Polis, M. A., Davey, R. T., Tavel, J. A., et al. (2001) · The Journal of Experimental Medicine · doi:10.1084/jem.194.12.1731 · Cited by 222
Differential Sensitivity of Naive and Memory CD8+ T Cells to Apoptosis in Vivo
Grayson, J. M., Harrington, L. E., Lanier, J. G., Wherry, E. J., & Ahmed, R. (2002) · The Journal of Immunology · doi:10.4049/jimmunol.169.7.3760 · Cited by 211
de Boer, R. J., Oprea, M., Antia, R., Murali‐Krishna, K., Ahmed, R., & Perelson, A. S. (2001) · Journal of Virology · doi:10.1128/jvi.75.22.10663-10669.2001 · Cited by 198
Self-citationHorton, H., Vogel, T. U., Carter, D. K., Vielhuber, K., FULLER, D. H., Shipley, T., Fuller, J. T., Kunstman, K., Sutter, G., Montefiori, D. C., et al. (2002) · Journal of Virology · doi:10.1128/jvi.76.14.7187-7202.2002 · Cited by 192
Igarashi, T., Brown, C. R., Azadegan, A. A., Haigwood, N. L., Dimitrov, D. S., Martin, M. A., & Shibata, R. (1999) · Nature Medicine · doi:10.1038/5576 · Cited by 164
Egan, M. A., Charini, W. A., Kuroda, M. J., Schmitz, J. E., Rácz, P., Tenner‐Racz, K., Manson, K. H., Wyand, M. S., Lifton, M. A., Nickerson, C. E., et al. (2000) · Journal of Virology · doi:10.1128/jvi.74.16.7485-7495.2000 · Cited by 144
Bachmann, M. F., Kündig, T. M., Hengartner, H., & Zinkernagel, R. M. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.2.640 · Cited by 127
The quest for an AIDS vaccine: is the CD8+ T-cell approach feasible?
McMichael, A. J., & Hanke, T. (2002) · Nature reviews. Immunology · doi:10.1038/nri779 · Cited by 127
Quantitative Image Analysis of HIV-1 Infection in Lymphoid TissuePreprint
Haase, A. T., Henry, K., Zupancic, M., Sedgewick, G., Faust, R. A., Melroe, H., Cavert, W. P., Gebhard, K. H., Staskus, K., Zhang, Z., et al. (1996) · RePEc: Research Papers in Economics · Cited by 127
Self-citationBullock, T. N. J., Mullins, D. W., & Engelhard, V. H. (2003) · The Journal of Immunology · doi:10.4049/jimmunol.170.4.1822 · Cited by 112
TCR Signal Transduction in Antigen-Specific Memory CD8 T Cells
Kersh, E. N., Kaech, S. M., Onami, T. M., Moran, M., Wherry, E. J., Miceli, M. C., & Ahmed, R. (2003) · The Journal of Immunology · doi:10.4049/jimmunol.170.11.5455 · Cited by 112
Staprans, S. I., Dailey, P. J., Rosenthal, A. N., Horton, C., Grant, R. M., Lerche, N. W., & Feinberg, M. B. (1999) · Journal of Virology · doi:10.1128/jvi.73.6.4829-4839.1999 · Cited by 112
Vogel, T. U., Reynolds, M. R., FULLER, D. H., Vielhuber, K., Shipley, T., Fuller, J. T., Kunstman, K., Sutter, G., Marthas, M. L., Erfle, V., et al. (2003) · Journal of Virology · doi:10.1128/jvi.77.24.13348-13360.2003 · Cited by 103
Lieberman, J., Skolnik, P. R., Parkerson, G. R., Fabry, J. A., Landry, B., Bethel, J., Kagan, J., & the DATRI 006 Study Team (1997) · Blood · doi:10.1182/blood.v90.6.2196 · Cited by 96
Rapid Clearance of Simian Immunodeficiency Virus Particles from Plasma of Rhesus Macaques
Zhang, L., Dailey, P. J., Tian, H., Gettie, A., Bonhoeffer, S., Perelson, A. S., & Ho, D. D. (1999) · Journal of Virology · doi:10.1128/jvi.73.1.855-860.1999 · Cited by 92
Self-citationChen, X., Scala, G., Quinto, I., Liu, W., Chun, T., Justement, J. S., Cohen, O. J., vanCott, T. C., Iwanicki, M., Lewis, M. G., et al. (2001) · Nature Medicine · doi:10.1038/nm1101-1225 · Cited by 78
Kinetics of TCR Use in Response to Repeated Epitope-Specific Immunization
Monsurrò, V., Nielsen, M.-B., Pérez‐Díez, A., Dudley, M. E., Wang, E., Rosenberg, S. A., & Marincola, F. M. (2001) · The Journal of Immunology · doi:10.4049/jimmunol.166.9.5817 · Cited by 56
Rev Activity Determines Sensitivity of HIV-1-Infected Primary T Cells to CTL Killing
Bobbitt, K. R., Addo, M. M., Altfeld, M. A., Filzen, T. M., Onafuwa-Nuga, A., Walker, B. D., & Collins, K. L. (2003) · Immunity · doi:10.1016/s1074-7613(03)00031-1 · Cited by 48
Subbramanian, R. A., Kuroda, M. J., Charini, W. A., Barouch, D. H., Costantino, C. M., Santra, S., Schmitz, J. E., Martin, K. L., Lifton, M. A., Gorgone, D. A., et al. (2003) · Journal of Virology · doi:10.1128/jvi.77.18.10113-10118.2003 · Cited by 39
Holtkamp, G. M., de Vos, A. F., Kijlstra, A., & Peek, R. (1999) · European Journal of Immunology · doi:10.1002/(sici)1521-4141(199901)29:01 · Cited by 31
Preventing AIDS But Not HIV-1 Infection with a DNA Vaccine
Shen, X., & Siliciano, R. F. (2000) · Science · doi:10.1126/science.290.5491.463 · Cited by 20
Santra, S., Barouch, D. H., Kuroda, M. J., Schmitz, J. E., Krivulka, G. R., Beaudry, K. R., Lord, C. I., Lifton, M. A., Wyatt, L. S., Moss, B., et al. (2002) · Journal of Virology · doi:10.1128/jvi.76.12.6376-6381.2002 · Cited by 19
Cited by
Sorted by citations
Perils at mucosal front lines for HIV and SIV and their hosts
Haase, A. T. (2005) · Nature reviews. Immunology · doi:10.1038/nri1706 · Cited by 436
Blanchet, F. P., Moris, A., Nikolic, D. S., Lehmann, M., Cardinaud, S., Stalder, R., Garcia, E., Dinkins, C., Leuba, F., Wu, L. J., et al. (2010) · Immunity · doi:10.1016/j.immuni.2010.04.011 · Cited by 307
Modeling the within-host dynamics of HIV infection
Perelson, A. S., & Ribeiro, R. M. (2013) · BMC Biology · doi:10.1186/1741-7007-11-96 · Cited by 293
Self-citationProspects for durable immune control of SARS-CoV-2 and prevention of reinfection
Cromer, D., Juno, J. A., Khoury, D., Reynaldi, A., Wheatley, A. K., Kent, S. J., & Davenport, M. P. (2021) · Nature Reviews Immunology · doi:10.1038/s41577-021-00550-x · Cited by 265
Self-citationRibeiro, R. M., Li, Q., Chavez, L. L., Li, D., Self, S. G., & Perelson, A. S. (2010) · Journal of Virology · doi:10.1128/jvi.00127-10 · Cited by 237
Self-citation
Metadata
- Authors
- Davenport, M. P., Ribeiro, R. M., & Perelson, A. S.
- Affiliations
- UNSW Sydney (AU)
- Los Alamos National Laboratory (US)
- Venue
- Journal of Virology
- Publisher
- American Society for Microbiology
- Published
- 2004-09-15
- Volume
- 78
- Issue
- 18
- Pages
- 10096-10103
- ISSN
- 0022-538X (ISSN-L)
- 1098-5514
- PMC
- PMC515020
- OpenAlex
- W2093889144
- Cited by
- 101
- References
- 61
- Citations by year
- 2025: 2 · 2024: 1 · 2023: 1 · 2022: 2 · 2021: 4 · 2020: 5 · 2019: 5 · 2018: 4 · 2017: 5 · 2016: 4 · 2015: 8 · 2014: 2 · 2013: 3 · 2012: 5
- FWCI
- 2.95
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Journal of Virology (publishedVersion)
- PubMed Central (publishedVersion)
- PubMed (publishedVersion)
- Funders
- U.S. Department of Energy (W-7405, W-7405-ENG-36)
- James S. McDonnell Foundation
- National Institutes of Health (AI28433)
- National Institute of Allergy and Infectious Diseases (R37AI028433, AI28433, R01AI028433)
- National Center for Research Resources (RR 06555, R01RR006555)
- Topics
- Life Sciences › Immunology and Microbiology › Virology › HIV Research and Treatment
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and B-cell Immunology
- Life Sciences › Immunology and Microbiology › Immunology › T-cell and Retrovirus Studies
- Keywords
- HIV infection, CD8+ T cells, cytotoxic T lymphocytes, vaccine-induced immunity, viral replication kinetics, viral load, persistent infection, HIV vaccine efficacy, disease progression
- MeSH terms
- Animals, Humans, Kinetics, Macaca mulatta, Time Factors, Virus Replication, Simian Immunodeficiency Virus, HIV-1, HIV Infections, Gene Products, gag, Immunodominant Epitopes, Simian Acquired Immunodeficiency Syndrome, AIDS Vaccines, CD8-Positive T-Lymphocytes, SAIDS Vaccines
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review