The DOI matches its Crossref record; 37 of the 37 references it cites were found in a registry or an index.
Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants
Open accessAbstract
Viral genome sequencing has guided our understanding of the spread and extent of genetic diversity of SARS-CoV-2 during the COVID-19 pandemic. SARS-CoV-2 viral genomes are usually sequenced from nasopharyngeal swabs of individual patients to track viral spread.
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Cites
Fast gapped-read alignment with Bowtie 2
Langmead, B., & Salzberg, S. L. (2012) · Nature Methods · doi:10.1038/nmeth.1923 · Cited by 56,400
SciPy 1.0: fundamental algorithms for scientific computing in Python
Virtanen, P., Gommers, R., Oliphant, T. E., Haberland, M., Reddy, T., Cournapeau, D., Burovski, E., Peterson, P., Weckesser, W., Bright, J., et al. (2020) · Nature Methods · doi:10.1038/s41592-019-0686-2 · Cited by 38,430
SciPy 1.0: fundamental algorithms for scientific computing in Python
Virtanen, P., Gommers, R., Oliphant, T. E., Haberland, M., Reddy, T., Cournapeau, D., Burovski, E., Peterson, P., Weckesser, W., Bright, J., et al. (2019) · Apollo - University of Cambridge Repository · doi:10.17863/cam.64134 · Cited by 10,460
An interactive web-based dashboard to track COVID-19 in real time
Dong, E., Du, H., & Gardner, L. (2020) · The Lancet Infectious Diseases · doi:10.1016/s1473-3099(20)30120-1 · Cited by 10,048
Virological assessment of hospitalized patients with COVID-2019
Wölfel, R., Corman, V. M., Guggemos, W., Seilmaier, M., Zange, S., Müller, M. A., Niemeyer, D., Jones, T. C., Vollmar, P., Rothe, C., et al. (2020) · Nature · doi:10.1038/s41586-020-2196-x · Cited by 6,661
Sambamba: fast processing of NGS alignment formats
Tarasov, A., Vilella, A. J., Cuppen, E., Nijman, I. J., & Prins, P. (2015) · Bioinformatics · doi:10.1093/bioinformatics/btv098 · Cited by 2,413
Data, disease and diplomacy: GISAID's innovative contribution to global health
Elbe, S., & Buckland‐Merrett, G. (2017) · Global Challenges · doi:10.1002/gch2.1018 · Cited by 1,928
Ahmed, W., Angel, N., Edson, J., Bibby, K., Bivins, A., O'Brien, J. W., Choi, P. M., Kitajima, M., Simpson, S. L., Li, J., et al. (2020) · Science of The Total Environment · doi:10.1016/j.scitotenv.2020.138764 · Cited by 1,808
Medema, G., Heijnen, L., Elsinga, G., Italiaander, R., & Brouwer, A. (2020) · Environmental Science & Technology Letters · doi:10.1021/acs.estlett.0c00357 · Cited by 1,747
SARS-CoV-2 Titers in Wastewater Are Higher than Expected from Clinically Confirmed Cases
Wu, F., Zhang, J., Xiao, A., Gu, X., Lee, W. L., Armas, F., Kauffman, K., Hanage, W., Matus, M., Ghaeli, N., et al. (2020) · mSystems · doi:10.1128/msystems.00614-20 · Cited by 861
Metadata
- Authors
- Crits-Christoph, A., Kantor, R. S., Olm, M. R., Whitney, O. N., Al-Shayeb, B., Lou, Y. C., Flamholz, A., Kennedy, L. C., Greenwald, H., Hinkle, A., Hetzel, J., Spitzer, S., Koble, J., Tan, A., Hyde, F., Schroth, G., Kuersten, S., Banfield, J. F., & Nelson, K. L.
- Venue
- mBio
- Publisher
- American Society for Microbiology
- Published
- 2021-02-23
- Volume
- 12
- Issue
- 1
- ISSN
- 2150-7511 (ISSN-L)
- 2161-2129
- OpenAlex
- W3124259713
- Cited by
- 361
- References
- 37
- FWCI
- 22.65
- Type
- journal article
- Language
- en
- Open access
- gold
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- CoChat. (2026). Citation check: Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants. https://app.cochat.ai/papers/10.1128/mbio.02703-20
- The paper
- Crits-Christoph, A., Kantor, R. S., Olm, M. R., Whitney, O. N., Al-Shayeb, B., Lou, Y. C., Flamholz, A., Kennedy, L. C., Greenwald, H., Hinkle, A., Hetzel, J., Spitzer, S., Koble, J., Tan, A., Hyde, F., Schroth, G., Kuersten, S., Banfield, J. F., & Nelson, K. L. (2021). Genome Sequencing of Sewage Detects Regionally Prevalent SARS-CoV-2 Variants. mBio. https://doi.org/10.1128/mbio.02703-20
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Bibliographic data: Semantic Scholar, OpenAlex, Crossref.
Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
