The DOI matches its Crossref record; 41 of the 41 references it cites were found in a registry or an index.
Histone modifications and exercise adaptations
Abstract
The spatial association between genomic DNA and histone proteins within chromatin plays a key role in the regulation of gene expression and is largely governed by post-translational modifications to histone proteins, particularly H3 and H4. These modifications include phosphorylation, acetylation, and mono-, di-, and tri-methylation, and while some are associated with transcriptional repression, acetylation of lysine residues within H3 generally correlates with transcriptional activation. Histone acetylation is regulated by the balance between the activities of histone acetyl transferase (HAT) and histone deacetylase (HDAC). In skeletal muscle, the class II HDACs 4, 5, 7, and 9 play a key role in muscle development and adaptation and have been implicated in exercise adaptations. As just one example, exercise results in the nuclear export of HDACs 4 and 5, secondary to their phosphorylation by CaMKII and AMPK, two kinases that are activated during exercise in response to changes in sarcoplasmic Ca(2+) levels and energy status, in association with increased GLUT4 expression in human skeletal muscle. Unraveling the complexities of the so-called "histone code" before and after exercise is likely to lead to a greater understanding of the regulation of exercise/activity-induced alterations in skeletal muscle gene expression and reinforce the importance of skeletal muscle plasticity in health and disease.
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“HDAC5 functions to acetylate histones, causing the chromatin to be wound tighter restricting the access of transcription factors to promoter regions [31].”
From New strategies in sport nutrition to increase exercise performance (2016) · cites this paper as [31]
Citations
Cites
Crystal structure of the nucleosome core particle at 2.8 Å resolution
Luger, K., Mäder, A. W., Richmond, R. K., Sargent, D. F., & Richmond, T. J. (1997) · Nature · doi:10.1038/38444 · Cited by 9,466
The Role of Chromatin during Transcription
Li, B., Carey, M., & Workman, J. L. (2007) · Cell · doi:10.1016/j.cell.2007.01.015 · Cited by 3,503
Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes
Wang, Z., Zang, C., Cui, K., Schones, D. E., Barski, A., Peng, W., & Zhao, K. (2009) · Cell · doi:10.1016/j.cell.2009.06.049 · Cited by 1,344
Signal-dependent nuclear export of a histone deacetylase regulates muscle differentiation
McKinsey, T. A., Zhang, C., Lu, J., & Olson, E. N. (2000) · Nature · doi:10.1038/35040593 · Cited by 1,051
Histone Deacetylase 4 Controls Chondrocyte Hypertrophy during Skeletogenesis
Vega, R. B., Matsuda, K., Oh, J., Barbosa, A. C. C., Yang, X., Meadows, E., McAnally, J., Pomajzl, C., Shelton, J. M., Richardson, J. A., et al. (2004) · Cell · doi:10.1016/j.cell.2004.10.024 · Cited by 805
Cotranscriptional Set2 Methylation of Histone H3 Lysine 36 Recruits a Repressive Rpd3 Complex
Keogh, M., Kurdistani, S. K., Morris, S. A., Ahn, S., Podolny, V., Collins, S. R., Schuldiner, M., Chin, K., Punna, T., Thompson, N. J., et al. (2005) · Cell · doi:10.1016/j.cell.2005.10.025 · Cited by 780
Fischle, W., Dequiedt, F., Hendzel, M. J., Guenther, M. G., Lazar, M. A., Voelter, W., & Verdin, E. (2002) · Molecular Cell · doi:10.1016/s1097-2765(01)00429-4 · Cited by 754
Chang, S., McKinsey, T. A., Zhang, C. L., Richardson, J. A., Hill, J. A., & Olson, E. N. (2004) · Molecular and Cellular Biology · doi:10.1128/mcb.24.19.8467-8476.2004 · Cited by 612
Chromatin remodelling: the industrial revolution of DNA around histones
Saha, A., Wittmeyer, J., & Cairns, B. R. (2006) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm1945 · Cited by 590
Lu, J., McKinsey, T. A., Zhang, C., & Olson, E. N. (2000) · Molecular Cell · doi:10.1016/s1097-2765(00)00025-3 · Cited by 547
AMP-activated protein kinase regulates GLUT4 transcription by phosphorylating histone deacetylase 5
McGee, S. L., van Denderen, B. J. W., Howlett, K. F., Mollica, J., Schertzer, J. D., Kemp, B. E., & Hargreaves, M. (2008) · Diabetes · doi:10.2337/db07-0843 · Cited by 455
Self-citationHistone Deacetylase 7 Maintains Vascular Integrity by Repressing Matrix Metalloproteinase 10
Chang, S., Young, B. D., Li, S., Qi, X., Richardson, J. A., & Olson, E. N. (2006) · Cell · doi:10.1016/j.cell.2006.05.040 · Cited by 454
The logic of chromatin architecture and remodelling at promoters
Cairns, B. R. (2009) · Nature · doi:10.1038/nature08450 · Cited by 447
Czubryt, M. P., McAnally, J., Fishman, G. I., & Olson, E. N. (2003) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0337639100 · Cited by 418
Histone deacetylase degradation andMEF2 activation promote the formation of slow-twitch myofibers
Potthoff, M. J., Wu, H., Arnold, M., Shelton, J. M., Backs, J., McAnally, J., Richardson, J. A., Bassel‐Duby, R., & Olson, E. N. (2007) · Journal of Clinical Investigation · doi:10.1172/jci31960 · Cited by 416
Control of muscle development by dueling HATs and HDACs
McKinsey, T. A., Zhang, C. L., & Olson, E. N. (2001) · Current Opinion in Genetics & Development · doi:10.1016/s0959-437x(00)00224-0 · Cited by 414
Lo, W., Duggan, L. J., Tolga, N. C., Emre, N. C. T., Belotserkovskya, R., Lane, W. S., Shiekhattar, R., & Berger, S. L. (2001) · Science · doi:10.1126/science.1062322 · Cited by 369
Sakamoto, K., Göransson, O., Hardie, D. G., & Alessi, D. R. (2004) · American Journal of Physiology-Endocrinology and Metabolism · doi:10.1152/ajpendo.00074.2004 · Cited by 299
Exercise-induced histone modifications in human skeletal muscle
McGee, S. L., Fairlie, E., Garnham, A. P., & Hargreaves, M. (2009) · The Journal of Physiology · doi:10.1113/jphysiol.2009.181065 · Cited by 296
SIK1 is a class II HDAC kinase that promotes survival of skeletal myocytes
Berdeaux, R., Goebel, N., Banaszynski, L. A., Takemori, H., Wandless, T. J., Shelton, G. D., & Montminy, M. (2007) · Nature Medicine · doi:10.1038/nm1573 · Cited by 270
Exercise and Myocyte Enhancer Factor 2 Regulation in Human Skeletal Muscle
McGee, S. L., & Hargreaves, M. (2004) · Diabetes · doi:10.2337/diabetes.53.5.1208 · Cited by 205
Self-citationThai, M. V., Guruswamy, S., Cao, K. T., Pessin, J. E., & Olson, A. L. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.23.14285 · Cited by 201
The Histone Deacetylase HDAC4 Connects Neural Activity to Muscle Transcriptional Reprogramming
Cohen, T. J., Waddell, D. S., Barrientos, T., Lu, Z., Feng, G., Cox, G. A., Bodine, S. C., & Yao, T. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m706268200 · Cited by 193
Backs, J., Backs, T., Bezprozvannaya, S., McKinsey, T. A., & Olson, E. N. (2008) · Molecular and Cellular Biology · doi:10.1128/mcb.01611-07 · Cited by 187
Exercise Increases Ca2+–Calmodulin‐Dependent Protein Kinase II Activity in Human Skeletal Muscle
Rose, A. J., & Hargreaves, M. (2003) · The Journal of Physiology · doi:10.1113/jphysiol.2003.054171 · Cited by 174
Self-citationHistone deacetylase 9 couples neuronal activity to muscle chromatin acetylation and gene expression
Méjat, A., Ramond, F., Bassel‐Duby, R., Khochbin, S., Olson, E. N., & Schaeffer, L. (2005) · Nature Neuroscience · doi:10.1038/nn1408 · Cited by 169
Exercise Increases Nuclear AMPK α2 in Human Skeletal Muscle
McGee, S. L., Howlett, K. F., Starkie, R. L., Cameron-Smith, D., Kemp, B. E., & Hargreaves, M. (2003) · Diabetes · doi:10.2337/diabetes.52.4.926 · Cited by 160
Self-citationEffects of exercise on GLUT-4 and glycogenin gene expression in human skeletal muscle
Kraniou, Y. N., Cameron‐Smith, D., Misso, M. L., Collier, G. R., & Hargreaves, M. (2000) · Journal of Applied Physiology · doi:10.1152/jappl.2000.88.2.794 · Cited by 153
Self-citationLiu, Y., Randall, W. R., & Schneider, M. F. (2005) · The Journal of Cell Biology · doi:10.1083/jcb.200408128 · Cited by 150
Smith, J. A. H., Kohn, T. A., Chetty, A. K., & Ojuka, E. O. (2008) · American Journal of Physiology-Endocrinology and Metabolism · doi:10.1152/ajpendo.00747.2007 · Cited by 115
An expression screen reveals modulators of class II histone deacetylase phosphorylation
Chang, S., Bezprozvannaya, S., Li, S., & Olson, E. N. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0503275102 · Cited by 108
Protein Kinase D1 Stimulates MEF2 Activity in Skeletal Muscle and Enhances Muscle Performance
Kim, M.-S., Fielitz, J., McAnally, J., Shelton, J. M., Lemon, D. D., McKinsey, T. A., Richardson, J. A., Bassel‐Duby, R., & Olson, E. N. (2008) · Molecular and Cellular Biology · doi:10.1128/mcb.00189-08 · Cited by 104
Exercise increases MEF2‐ and GEF DNA‐binding activities in human skeletal muscle
McGee, S. L., Sparling, D., Olson, A., & Hargreaves, M. (2006) · The FASEB Journal · doi:10.1096/fj.05-4671fje · Cited by 100
Cohen, T. J., Barrientos, T., Hartman, Z. C., Garvey, S. M., Cox, G. A., & Yao, T. (2008) · The FASEB Journal · doi:10.1096/fj.08-115931 · Cited by 86
Pandorf, C. E., Haddad, F., Wright, C. E., Bodell, P. W., & Baldwin, K. M. (2009) · American Journal of Physiology-Cell Physiology · doi:10.1152/ajpcell.00075.2009 · Cited by 79
Mukwevho, E., Kohn, T. A., Lang, D. M., Nyatia, E., Smith, J. A. H., & Ojuka, E. O. (2008) · American Journal of Physiology-Endocrinology and Metabolism · doi:10.1152/ajpendo.00312.2007 · Cited by 75
Darwich, R., & Massarani, B. (2000) · Journal of Applied Physics · doi:10.1063/1.373804 · Cited by 67
Inactivation of HDAC5 by SIK1 in AICAR-treated C2C12 Myoblasts
Takemori, H., HASHIMOTO, Y. K., Nakae, J., Olson, E. N., & Okamoto, M. (2009) · Endocrine Journal · doi:10.1507/endocrj.k08e-173 · Cited by 67
Epigenetic Control of Skeletal Muscle Fibre Type
Baar, K. (2010) · Acta Physiologica · doi:10.1111/j.1748-1716.2010.02121.x · Cited by 57
Heterochromatin dysregulation in human diseases
Hahn, M., Dambacher, S., & Schotta, G. (2010) · Journal of Applied Physiology · doi:10.1152/japplphysiol.00053.2010 · Cited by 48
Shen, T., Liu, Y., Randall, W. R., & Schneider, M. F. (2006) · Journal of Muscle Research and Cell Motility · doi:10.1007/s10974-006-9080-7 · Cited by 46
Cited by
Sorted by citations
Integrative Biology of Exercise
Hawley, J. A., Hargreaves, M., Joyner, M. J., & Zierath, J. R. (2014) · Cell · doi:10.1016/j.cell.2014.10.029 · Cited by 1,152
Self-citationDietary factors, epigenetic modifications and obesity outcomes: Progresses and perspectives
Milagro, F. I., Mansego, M. L., de Miguel, C., & Martínez, J. A. (2012) · Molecular Aspects of Medicine · doi:10.1016/j.mam.2012.06.010 · Cited by 323
Egan, B., & Sharples, A. P. (2023) · Physiological Reviews · doi:10.1152/physrev.00054.2021 · Cited by 278
Nutrition, Epigenetics, and Metabolic Syndrome
Wang, J., Wu, Z., Li, D., Li, N., Dindot, S. V., Satterfield, M. C., Bazer, F. W., & Wu, G. (2011) · Antioxidants and Redox Signaling · doi:10.1089/ars.2011.4381 · Cited by 266
New strategies in sport nutrition to increase exercise performance
Close, G. L., Hamilton, D. L., Philp, A., Burke, L. M., & Morton, J. P. (2016) · Free Radical Biology and Medicine · doi:10.1016/j.freeradbiomed.2016.01.016 · Cited by 221
Metadata
- Authors
- McGee, S. L., & Hargreaves, M.
- Affiliations
- Deakin University (AU)
- The University of Melbourne (AU)
- Corresponding author
- McGee, Sean L.
- Venue
- Journal of Applied Physiology
- Publisher
- American Physiological Society
- Published
- 2011-01
- Volume
- 110
- Issue
- 1
- Pages
- 258-263
- ISSN
- 0161-7567 (ISSN-L)
- 8750-7587
- 1522-1601
- OpenAlex
- W2152012558
- Cited by
- 120
- References
- 41
- Citations by year
- 2026: 7 · 2025: 5 · 2024: 5 · 2023: 8 · 2022: 8 · 2021: 4 · 2020: 4 · 2019: 14 · 2018: 9 · 2017: 9 · 2016: 7 · 2015: 8 · 2014: 10 · 2013: 9 · 2012: 5
- FWCI
- 0.62
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Journal of Applied Physiology (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Chromatin Dynamics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Histone Deacetylase Inhibitors Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Muscle Physiology and Disorders
- Keywords
- histone modifications, exercise adaptation, skeletal muscle, histone acetylation, histone deacetylase, class II HDACs, histone acetyltransferase, histone methylation, histone phosphorylation, CaMKII, AMPK, GLUT4, nuclear export, histone code, gene expression regulation, muscle plasticity
- MeSH terms
- Adaptation, Physiological, Animals, Physical Exertion, Histones, Humans, Muscle Contraction, Muscle, Skeletal
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review