The DOI matches its Crossref record; 2 of the 2 references it cites were found in a registry or an index.
Blast2GO: A Comprehensive Suite for Functional Analysis in Plant Genomics
Open accessAbstract
Functional annotation of novel sequence data is a primary requirement for the utilization of functional genomics approaches in plant research. In this paper, we describe the Blast2GO suite as a comprehensive bioinformatics tool for functional annotation of sequences and data mining on the resulting annotations, primarily based on the gene ontology (GO) vocabulary. Blast2GO optimizes function transfer from homologous sequences through an elaborate algorithm that considers similarity, the extension of the homology, the database of choice, the GO hierarchy, and the quality of the original annotations. The tool includes numerous functions for the visualization, management, and statistical analysis of annotation results, including gene set enrichment analysis. The application supports InterPro, enzyme codes, KEGG pathways, GO direct acyclic graphs (DAGs), and GOSlim. Blast2GO is a suitable tool for plant genomics research because of its versatility, easy installation, and friendly use.
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Basic local alignment search tool
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Compact genome of the Antarctic midge is likely an adaptation to an extreme environment
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Complete genome analysis of Bacillus velezensis TS5 and its potential as a probiotic strain in mice
Chen, B., Zhou, Y., Duan, L., Gong, X., Liu, X., Pan, K., Zeng, D., Ni, X., & Zeng, Y. (2023) · Frontiers in Microbiology · doi:10.3389/fmicb.2023.1322910 · Cited by 32
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Metadata
- Authors
- Conesa, A., & Götz, S.
- Venue
- International Journal of Plant Genomics
- Publisher
- Hindawi Limited
- Published
- 2008-04-30
- Volume
- 2008
- Pages
- 1-12
- ISSN
- 1687-5370 (ISSN-L)
- 1687-5389
- OpenAlex
- W2001338440
- Cited by
- 2,151
- References
- 2
- FWCI
- 11.54
- Type
- journal article
- Language
- en
- Open access
- hybrid
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
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