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Pyrosequencing analysis of the Oral Microflora of healthy adults
Abstract
A good definition of commensal microflora and an understanding of its relation to health are essential in preventing and combating disease. We hypothesized that the species richness of human oral microflora is underestimated. Saliva and supragingival plaque were sampled from 71 and 98 healthy adults, respectively. Amplicons from the V6 hypervariable region of the small-subunit ribosomal RNA gene were generated by PCR, pooled into saliva and plaque pools, and sequenced by means of the Genome Sequencer 20 system at 454 Life Sciences. Data were evaluated by taxonomic and rarefaction analyses. The 197,600 sequences generated yielded about 29,000 unique sequences, representing 22 taxonomic phyla. Grouping the sequences in operational taxonomic units (6%) yielded 3621 and 6888 species-level phylotypes in saliva and plaque, respectively. This work gives a radically new insight into the diversity of human oral microflora, which, with an estimated number of 19,000 phylotypes, is considerably higher than previously reported.
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“The reduction in pathogenic periodontal bacteria in biofilms by mechanical instrumentation [13] through nonsurgical periodontal treatment has been shown to have limited long-term benefits [14,15].”
From A Cross-Talk between Diet and the Oral Microbiome: Balance of Nutrition on Inflammation and Immune System’s Response during Periodontitis (2022) · cites this paper as [15]
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Kim, H., Yoon, J., Cha, C., Seong, C. N., Im, W., Jahng, K., Jeon, C. O., Kim, S. B., & Joh, K. (2016) · Journal of Species Research · doi:10.12651/jsr.2016.5.1.166
“, 2000) and normal microbiota of the oral cavity, either in the saliva or dental plaque (Keijser et al., 2008; Nasidze et al., 2009a, 2009b).”
BackgroundInfluentialAssociation Between Oral Infections and Cancer Risk
Meurman, J. H. (2015) · Springer eBooks · doi:10.1007/978-3-319-25091-5_7
Correlation between DMFT index andoccurrence of Lactobacillus spp. in the oral cavity
Khajeh, M., & Baserisalehi, M. (2015) · International journal of molecular and clinical microbiology
Saha, S. (2015) · eScholarship@McGill (McGill) · doi:10.82308/7943
Metadata
- Authors
- Keijser, B. J. F., Zaura, E., Huse, S. M., van der Vossen, J. M. B. M., Schuren, F. H. J., Montijn, R. C., ten Cate, J. M., & Crielaard, W.
- Affiliations
- Marine Biological Laboratory (US)
- TNO Quality of Life, Business Unit Food and Biotechnology Innovations, Microbial Genomics Group, Zeist, The Netherlands;
- Venue
- Journal of Dental Research
- Publisher
- SAGE Publications
- Published
- 2008-11
- Volume
- 87
- Issue
- 11
- Pages
- 1016-1020
- ISSN
- 0022-0345 (ISSN-L)
- 1544-0591
- OpenAlex
- W2103805072
- Cited by
- 669
- References
- 27
- Citations by year
- 2026: 6 · 2025: 14 · 2024: 33 · 2023: 16 · 2022: 39 · 2021: 26 · 2020: 30 · 2019: 24 · 2018: 47 · 2017: 45 · 2016: 41 · 2015: 42 · 2014: 49 · 2013: 50 · 2012: 65
- FWCI
- 53.33
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Journal of Dental Research (publishedVersion)
- PubMed (publishedVersion)
- UvA-DARE (University of Amsterdam) (publishedVersion)
- UvA-DARE (University of Amsterdam) (submittedVersion)
- VU Research Portal (submittedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion)
- Topics
- Health Sciences › Dentistry › Periodontics › Oral microbiology and periodontitis research
- Physical Sciences › Environmental Science › Ecology › Microbial Community Ecology and Physiology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Keywords
- oral microbiota, species richness, saliva, supragingival plaque, 16S rRNA gene, operational taxonomic units, phylotypes, microbial diversity, healthy adults
- MeSH terms
- Adult, Dental Plaque, DNA, Bacterial, Humans, RNA, Bacterial, RNA, Ribosomal, 16S, Saliva, Bacterial Typing Techniques, Sequence Analysis, DNA
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