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Whole transcriptome sequencing reveals recurrent NOTCH1 mutations in mantle cell lymphoma

Open access
Kridel, Robert, Meissner, Barbara, Rogic, Sanja, Boyle, Merrill, Telenius, Adele, Woolcock, Bruce, Gunawardana, Jay, Jenkins, Christopher, Cochrane, Chris, Ben-Neriah, Susana, Tan, King, Morin, Ryan D., Opat, Stephen, Sehn, Laurie H., Connors, Joseph M., Marra, Marco A., Weng, Andrew P., Steidl, Christian, Gascoyne, Randy D.·2012·Blood

Abstract

Mantle cell lymphoma (MCL), an aggressive subtype of non-Hodgkin lymphoma, is characterized by the hallmark translocation t(11;14)(q13;q32) and the resulting overexpression of cyclin D1 (CCND1). Our current knowledge of this disease encompasses frequent secondary cytogenetic aberrations and the recurrent mutation of a handful of genes, such as TP53, ATM, and CCND1. However, these findings insufficiently explain the biologic underpinnings of MCL. Here, we performed whole transcriptome sequencing on a discovery cohort of 18 primary tissue MCL samples and 2 cell lines. We found recurrent mutations in NOTCH1, a finding that we confirmed in an extension cohort of 108 clinical samples and 8 cell lines. In total, 12% of clinical samples and 20% of cell lines harbored somatic NOTCH1 coding sequence mutations that clustered in the PEST domain and predominantly consisted of truncating mutations or small frame-shifting indels. NOTCH1 mutations were associated with poor overall survival (P = .003). Furthermore, we showed that inhibition of the NOTCH pathway reduced proliferation and induced apoptosis in 2 MCL cell lines. In summary, we have identified recurrent NOTCH1 mutations that provide the preclinical rationale for therapeutic inhibition of the NOTCH pathway in a subset of patients with MCL.

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Metadata

Authors
Kridel, R., Meissner, B., Rogic, S., Boyle, M., Telenius, A., Woolcock, B., Gunawardana, J., Jenkins, C., Cochrane, C., Ben-Neriah, S., Tan, K., Morin, R. D., Opat, S., Sehn, L. H., Connors, J. M., Marra, M. A., Weng, A. P., Steidl, C., & Gascoyne, R. D.
Venue
Blood
Published
2012-03-01
Volume
119
Issue
9
Pages
1963-1971
ISSN
  • 0006-4971 (ISSN-L)
  • 1528-0020
OpenAlex
W2050999393
Cited by
338
References
4
FWCI
18.81
Type
journal article
Language
en
Open access
bronze

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CoChat. (2026). Citation check: Whole transcriptome sequencing reveals recurrent NOTCH1 mutations in mantle cell lymphoma. https://app.cochat.ai/papers/10.1182/blood-2011-11-391474
The paper
Kridel, R., Meissner, B., Rogic, S., Boyle, M., Telenius, A., Woolcock, B., Gunawardana, J., Jenkins, C., Cochrane, C., Ben-Neriah, S., Tan, K., Morin, R. D., Opat, S., Sehn, L. H., Connors, J. M., Marra, M. A., Weng, A. P., Steidl, C., & Gascoyne, R. D. (2012). Whole transcriptome sequencing reveals recurrent NOTCH1 mutations in mantle cell lymphoma. Blood. https://doi.org/10.1182/blood-2011-11-391474

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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.