The DOI matches its Crossref record; 8 of the 8 references it cites were found in a registry or an index.
Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy
Open accessAbstract
We have developed a method for automated probabilistic reconstruction of a set of major white-matter pathways from diffusion-weighted MR images. Our method is called TRACULA (TRActs Constrained by UnderLying Anatomy) and utilizes prior information on the anatomy of the pathways from a set of training subjects. By incorporating this prior knowledge in the reconstruction procedure, our method obviates the need for manual interaction with the tract solutions at a later stage and thus facilitates the application of tractography to large studies. In this paper we illustrate the application of the method on data from a schizophrenia study and investigate whether the inclusion of both patients and healthy subjects in the training set affects our ability to reconstruct the pathways reliably. We show that, since our method does not constrain the exact spatial location or shape of the pathways but only their trajectory relative to the surrounding anatomical structures, a set a of healthy training subjects can be used to reconstruct the pathways accurately in patients as well as in controls.
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Fischl, B., Salat, D. H., Busa, E., Albert, M., Dieterich, M., Haselgrove, C., van der Kouwe, A., Killiany, R., Kennedy, D., Klaveness, S., et al. (2002) · Neuron · doi:10.1016/s0896-6273(02)00569-x · Cited by 8,610
Dysmyelination revealed through MRI as increased radial (but unchanged axial) diffusion of water
Song, S.-K., Sun, S.-W., Ramsbottom, M. J., Chang, C., Russell, J., & Cross, A. H. (2002) · NeuroImage · doi:10.1006/nimg.2002.1267 · Cited by 2,582
White Matter Changes in Schizophrenia: Evidence for Myelin-Related Dysfunction
Davis, K. L., Stewart, D. G., Friedman, J. I., Buchsbaum, M., Harvey, P. D., Hof, P. R., Buxbaum, J., & Haroutunian, V. (2003) · Archives of General Psychiatry · doi:10.1001/archpsyc.60.5.443 · Cited by 793
DTI mapping of human brain connectivity: Statistical fibre tracking and virtual dissection
Hagmann, P., Thiran, J.-P., Jonasson, L., Vandergheynst, P., Clarke, S., Maeder, P., & Meuli, R. (2003) · NeuroImage · doi:10.1016/s1053-8119(03)00142-3 · Cited by 326
Progressive changes of white matter integrity in schizophrenia revealed by diffusion tensor imaging
Mori, T., Ohnishi, T., Hashimoto, R., Nemoto, K., Moriguchi, Y., Noguchi, H., Nakabayashi, T., Hori, H., Harada, S., Saitoh, O., et al. (2007) · Psychiatry Research: Neuroimaging · doi:10.1016/j.pscychresns.2006.09.004 · Cited by 132
ROSENBERGER, G., KUBICKI, M., NESTOR, P., CONNOR, E., BUSHELL, G., MARKANT, D., NIZNIKIEWICZ, M., WESTIN, C., KIKINIS, R., & JSAYKIN, A. (2008) · Schizophrenia Research · doi:10.1016/j.schres.2008.04.019 · Cited by 89
Kubicki, M., Niznikiewicz, M., Connor, E., Ungar, L., Nestor, P. G., Bouix, S., Dreusicke, M., Kikinis, R., McCarley, R. W., & Shenton, M. E. (2009) · Brain Imaging and Behavior · doi:10.1007/s11682-009-9061-8 · Cited by 38
Cited by
Fischl, B. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2012.01.021 · Cited by 9,526
The first step for neuroimaging data analysis: DICOM to NIfTI conversion
Li, X., Morgan, P. S., Ashburner, J., Smith, J., & Rorden, C. (2016) · Journal of Neuroscience Methods · doi:10.1016/j.jneumeth.2016.03.001 · Cited by 1,073
Dubois, J., Dehaene-Lambertz, G., Kulikova, S., Poupon, C., Hüppi, P. S., & Hertz-Pannier, L. (2014) · Neuroscience · doi:10.1016/j.neuroscience.2013.12.044 · Cited by 851
Tract profiles of white matter properties: automating fiber-tract quantification
Yeatman, J. D., Dougherty, R. F., Myall, N. J., Wandell, B. A., & Feldman, H. M. (2012) · PLoS ONE · doi:10.1371/journal.pone.0049790 · Cited by 840
TractSeg - Fast and accurate white matter tract segmentation
Wasserthal, J., Neher, P., & Maier-Hein, K. H. (2018) · NeuroImage · doi:10.1016/j.neuroimage.2018.07.070 · Cited by 664
Metadata
- Authors
- Yendiki, A.
- Venue
- Frontiers in Neuroinformatics
- Publisher
- Frontiers Media SA
- Published
- 2011
- Volume
- 5
- Pages
- 23-23
- ISSN
- 1662-5196 (ISSN-L)
- OpenAlex
- W2110579639
- Cited by
- 593
- References
- 8
- FWCI
- 12.18
- Type
- journal article
- Language
- en
- Open access
- gold
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- Yendiki, A. (2011). Automated probabilistic reconstruction of white-matter pathways in health and disease using an atlas of the underlying anatomy. Frontiers in Neuroinformatics. https://doi.org/10.3389/fninf.2011.00023
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Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).
Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.
