DPARSF: a MATLAB toolbox for “pipeline” data analysis of resting-state fMRI

Cited by (1,018)

Items 901–1,000 of 1,018

1. Brain functional network connectivity development in very preterm infants: The first six months
   Lili He, Nehal A. Parikh · 2016 · Early Human Development
2. Disrupted resting-state insular subregions functional connectivity in post-traumatic stress disorder
   Youxue Zhang, Bing Xie, Heng Chen, Meiling Li, Xiaonan Guo, Huafu Chen · 2016 · Medicine
3. Treatment effects of olanzapine on homotopic connectivity in drug-free schizophrenia at rest
   Wenbin Guo, Feng Liu, Jindong Chen, Renrong Wu, Lehua Li, Zhikun Zhang, Huafu Chen, Jingping Zhao · 2017 · The World Journal of Biological Psychiatry
4. Abnormal regional spontaneous neural activity in visual pathway in retinal detachment patients: a resting-state functional MRI study
   Xin Huang, Dan Li, Haijun Li, Yu-Lin Zhong, Shelby Freeberg, Jing Bao, Xianjun Zeng, Yi Shao · 2017 · Neuropsychiatric Disease and Treatment
5. Principal States of Dynamic Functional Connectivity Reveal the Link Between Resting-State and Task-State Brain: An fMRI Study
   Lin Cheng, Yang Zhu, Junfeng Sun, Lifu Deng, Naying He, Yang Yang, Huawei Ling, Hasan Ayaz, Yi Fu, Shanbao Tong · 2018 · International Journal of Neural Systems
6. Spontaneous regional brain activity links restrained eating to later weight gain among young women
   Debo Dong, Todd Jackson, Yulin Wang, Hong Chen · 2015 · Biological Psychology
7. Regional homogeneity analysis of major Parkinson’s disease subtypes based on functional magnetic resonance imaging
   Jun Hu, Chaoyong Xiao, Dawei Gong, Chang Qiu, Weiguo Liu, Wenbin Zhang · 2019 · Neuroscience Letters
8. Decoding Brain States From fMRI Signals by Using Unsupervised Domain Adaptation
   Yufei Gao, Yameng Zhang, Zhiyuan Cao, Xiaojuan Guo, Jiacai Zhang · 2019 · IEEE Journal of Biomedical and Health Informatics
9. A High-Throughput Pipeline Identifies Robust Connectomes But Troublesome Variability
   Gregory Kiar, Eric Bridgeford, William Gray Roncal, Vikram Chandrashekhar, Disa Mhembere, Sephira G. Ryman, Xi‐Nian Zuo, Daniel S. Margulies, Richard Cameron Craddock, Carey E. Priebe et al. · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
10. Dysfunctional resting-state connectivities of brain regions with structural deficits in drug-naive first-episode schizophrenia adolescents
    Yan Zhang, Junjie Zheng, Xiaoduo Fan, Xiaofeng Guo, Wenbin Guo, Ge Yang, Huafu Chen, Jingping Zhao, Luxian Lv · 2015 · Schizophrenia Research
11. Decreased regional activity of default-mode network in unaffected siblings of schizophrenia patients at rest
    Wenbin Guo, Qinji Su, Dapeng Yao, Jiajing Jiang, Jian Zhang, Zhikun Zhang, Liuyu Yu, Jinguo Zhai, Changqing Xiao · 2014 · European Neuropsychopharmacology
12. The correlation between Emotional Intelligence and gray matter volume in university students
    Yafei Tan, Qinglin Zhang, Wenfu Li, Dongtao Wei, Lei Qiao, Jiang Qiu, Glenn Hitchman, Yijun Liu · 2014 · Brain and Cognition
13. Decreased regional activity and network homogeneity of the fronto-limbic network at rest in drug-naive major depressive disorder
    Wenbin Guo, Feng Liu, Miaoyu Yu, Jian Zhang, Zhikun Zhang, Jianrong Liu, Changqing Xiao, Jingping Zhao · 2015 · Australian & New Zealand Journal of Psychiatry
14. Preprocessing strategy influences graph‐based exploration of altered functional networks in major depression
    Viola Borchardt, Anton Lord, Meng Li, Johan N. van der Meer, Hans‐Jochen Heinze, Bernhard Bogerts, Michael J Breakspear, Martin Walter · 2016 · Human Brain Mapping
15. Atomoxetine Treatment Strengthens an Anti-Correlated Relationship between Functional Brain Networks in Medication-Naïve Adults with Attention-Deficit Hyperactivity Disorder: A Randomized Double-Blind Placebo-Controlled Clinical Trial
    Lin, Hsiang-Yuan, Gau, Susan Shur-Fen · 2016 · International Journal of Neuropsychopharmacology
16. Pons to Posterior Cingulate Functional Projections Predict Affective Processing Changes in the Elderly Following Eight Weeks of Meditation Training
    Robin Shao, Kati Roesmann, Xiujuan Geng, Tatia M.C. Lee · 2016 · EBioMedicine
17. Cerebral Functional Reorganization in Ischemic Stroke after Repetitive Transcranial Magnetic Stimulation: An fMRI Study
    Jing Li, Xuewei Zhang, Zhentao Zuo, Jie Lu, Chun‐Ling Meng, Hong-ying Fang, Rong Xue, Yong Fan A, Yuzhou Guan, Weihong Zhang · 2016 · CNS Neuroscience & Therapeutics
18. The value of resting-state functional MRI in subacute ischemic stroke: comparison with dynamic susceptibility contrast-enhanced perfusion MRI
    Ling Ni, Jingwei Li, Weiping Li, Fei Zhou, Fangfang Wang, Christopher G. Schwarz, Renyuan Liu, Hui Zhao, Wenbo Wu, Xin Zhang et al. · 2017 · Scientific Reports
19. Altered functional connectivity architecture of the brain in medication overuse headache using resting state fMRI
    Zhiye Chen, Xiaoyan Chen, Mengqi Liu, Zhao Dong, Lin Ma, Shengyuan Yu · 2017 · The Journal of Headache and Pain
20. Resting-State Seed-Based Analysis: An Alternative to Task-Based Language fMRI and Its Laterality Index
    K. A. Smitha, Karumattu Manattu Arun, P.G. Rajesh, Bejoy Thomas, Chandrasekharan Kesavadas · 2017 · American Journal of Neuroradiology
21. Individual Correspondence of Amyloid-β and Intrinsic Connectivity in the Posterior Default Mode Network Across Stages of Alzheimer’s Disease
    Lorenzo Pasquini, Alzheimer’s Disease Neuroimaging Initiative, Gloria S. Benson, Michel J. Grothe, Lukas Utz, Nicholas E. Myers, Igor Y. Yakushev, Timo Grimmer, Martin Scherr, Christian Sorg · 2017 · Journal of Alzheimer s Disease
22. Increased interhemispheric resting-state functional connectivity in healthy participants with insomnia symptoms
    Xuhua Li, Shougang Guo, Chunjuan Wang, Baojie Wang, Hao Sun, Xiaoting Zhang · 2017 · Medicine
23. Disrupted Brain Network Hubs in Subtype-Specific Parkinson's Disease
    Lingyan Ma, Xiaodan Chen, Yong He A, Huizi Ma, Tao Feng · 2017 · European Neurology
24. Sensory and cross-network contributions to response inhibition in patients with schizophrenia
    Matthew J. Hoptman, Emily M. Parker, Sangeeta Nair-Collins, Elisa C. Dias, Marina E. Ross, Joanna DiCostanzo, Pejman Sehatpour, Daniel C. Javitt · 2018 · NeuroImage Clinical
25. Aberrant Cortical Integration in First-Episode Psychosis During Natural Audiovisual Processing
    Teemu J.S. Mäntylä, Lauri Nummenmaa, Eva Rikandi, Maija Lindgren, Tuula Kieseppä, Riitta Hari, Jaana Suvisaari, Tuukka T. Raij · 2018 · Biological Psychiatry
26. Multiparametric graph theoretical analysis reveals altered structural and functional network topology in Alzheimer's disease
    Shih-Yen Lin, Chen‐Pei Lin, Tsung-Jen Hsieh, Chung-Fen Lin, Sih-Huei Chen, Yi‐Ping Chao, Yong‐Sheng Chen, Chih-Cheng Hsu, Li‐Wei Kuo · 2019 · NeuroImage Clinical
27. A connectivity-based parcellation improved functional representation of the human cerebellum
    Yudan Ren, Lei Guo, Christine Cong Guo · 2019 · Scientific Reports
28. Mindfulness‐based cognitive therapy is associated with distinct resting‐state neural patterns in patients with generalized anxiety disorder
    Xing‐Rong Zhao, Zhuangfei Chen, Chuanyuan Kang, Ruixiang Liu, Junyun Bai, Yu‐Ping Cao, Yuqi Cheng, Xiufeng Xu, Y.L. Zhang · 2019 · Asia-Pacific Psychiatry
29. Brain Functional Specialization Is Enhanced Among Tai Chi Chuan Practitioners
    Li-Zhen Chen, Xinru Yuan, Yuanchao Zhang, Shu Zhang, Liye Zou, Lin Yang, Yu‐Kai Chang, Qixin Xia, Yiqun Wang, Gao‐Xia Wei · 2020 · Archives of Physical Medicine and Rehabilitation
30. Amygdala activity related to perceived social support
    Wataru Sato, Takanori Kochiyama, Shota Uono, Reiko Sawada, Sakiko Yoshikawa · 2020 · Scientific Reports
31. Altered functional connectivity of right inferior frontal gyrus subregions in bipolar disorder: a resting state fMRI study
    Li Zhang, Wenfei Li, Long Wang, Tongjian Bai, Gong‐Jun Ji, Kai Wang, Yanghua Tian · 2020 · Journal of Affective Disorders
32. Brain structural and functional alterations in MDD patient with gastrointestinal symptoms: A resting-state MRI study
    Penghong Liu, Gaizhi Li, Ai‐Xia Zhang, Chunxia Yang, Zhifen Liu, Ning Sun, Zhang Kerang · 2020 · Journal of Affective Disorders
33. Resting-state brain connectivity in healthy young and middle-aged adults at risk of progressive Alzheimer’s disease
    Ludmila Kucikova, Jantje Goerdten, Maria‐Eleni Dounavi, Elijah Mak, Li Su, Adam D. Waldman, Samuel Danso, Graciela Muniz Terrera, Craig William Ritchie · 2021 · Neuroscience & Biobehavioral Reviews
34. Anterior–posterior dissociation of the default mode network in dogs
    Sreenath P. Kyathanahally, Hao Jia, Oleg M. Pustovyy, Paul Waggoner, Ronald J. Beyers, John Schumacher, Jay Barrett, Edward E. Morrison, Nouha Salibi, Thomas S. Denney et al. · 2014 · Brain Structure and Function
35. Spontaneous neural activity alterations in temporomandibular disorders: A cross-sectional and longitudinal resting-state functional magnetic resonance imaging study
    Shu Shu He, Fei Yue Li, F. Song, Sheng Yong Wu, J.-Y. Chen, Ning He, S.-J. Zou, X.-Q. Huang, Su Lui, Qiyong Gong et al. · 2014 · Neuroscience
36. Spatial–temporal signature of resting-state BOLD signals in classic trigeminal neuralgia
    Yanping Wang, Congying Xu, Liping Zhai, Xudong Lü, Xiaoqiang Wu, Ya-hui Yi, Ziyun Liu, Qiaobing Guan, Xiaoling Zhang · 2017 · Journal of Pain Research
37. Neural plasticity in amplitude of low frequency fluctuation, cortical hub construction, regional homogeneity resulting from working memory training
    Takeuchi, Hikaru, Taki, Yasuyuki, Nouchi, Rui, Sekiguchi, Atsushi, Kotozaki, Yuka, Nakagawa, Seishu, Makoto Miyauchi, Carlos, Sassa, Yuko, Kawashima, Ryuta · 2017 · Scientific Reports
38. Sex difference in trait empathy is encoded in the human anterior insula
    Xiao Xian Wu, Xuejing Lu, Huijuan Zhang, Yanzhi Bi, Ruolei Gu, Yazhuo Kong, Li Hu · 2022 · Cerebral Cortex
39. The classification of brain network for major depressive disorder patients based on deep graph convolutional neural network
    Manyun Zhu, Quan Yu, Xuan He · 2023 · Frontiers in Human Neuroscience
40. Graph-Based Conditional Generative Adversarial Networks for Major Depressive Disorder Diagnosis With Synthetic Functional Brain Network Generation
    Ji-Hye Oh, Deok-Joong Lee, Chang-Hoon Ji, Dong-Hee Shin, Ji-Wung Han, Young-Han Son, Tae‐Eui Kam · 2023 · IEEE Journal of Biomedical and Health Informatics
41. Aberrant orbitofrontal connectivity in marijuana smoking adolescents
    Melissa Patricia Lopez-Larson, Jadwiga Rogowska, Deborah A Yurgelun-Todd · 2015 · Developmental Cognitive Neuroscience
42. Neural Basis of Psychological Growth following Adverse Experiences: A Resting-State Functional MRI Study
    Takashi X. Fujisawa, Minyoung Jung, Masahiko Kojima, Daisuke N. Saito, Hirotaka Kosaka, Akemi Tomoda · 2015 · PLoS ONE
43. Acupuncture at KI3 in healthy volunteers induces specific cortical functional activity: an fMRI study
    Bo Zhu, Yanjie Wang, Guifeng Zhang, Huailiang Ouyang, Jiping Zhang, Yu Zheng, Shaoqun Zhang, Chunxiao Wu, Shanshan Qu, Junqi Chen et al. · 2015 · BMC Complementary and Alternative Medicine
44. Disrupted Interhemispheric Synchrony in Default Mode Network Underlying the Impairment of Cognitive Flexibility in Late-Onset Depression
    Zhenghua Hou, Yuxiu Sui, Xiaopeng Song, Yonggui Yuan · 2016 · Frontiers in Aging Neuroscience
45. Functional connectivity in the resting brain as biological correlate of the Affective Neuroscience Personality Scales
    Nadja Deris, Christian Montag, Martin Reuter, Bernd Weber, Sebastian A. Markett · 2016 · NeuroImage
46. Aberrant spontaneous neural activity and correlation with evoked-brain potentials in first-episode, treatment-naïve patients with deficit and non-deficit schizophrenia
    Zhe Li, Wei Lei, Wei Deng, Zhong Zheng, Mingli Li, Xiaohong Ma, Qiang Wang, Chaohua Huang, Na Li, David Andrew Collier et al. · 2017 · Psychiatry Research Neuroimaging
47. Effect of smoking on resting‐state functional connectivity in smokers: A n fMRI study
    Shuang Zhou, Dan Xiao, Peng Peng, Shuangkun Wang, Zhao Liu, Hai‐Yan Qin, Sheng‐Shu Li, Chen Wang · 2017 · Respirology
48. Catechol-O-methyltransferase polymorphism is associated with the cortico-cerebellar functional connectivity of executive function in children with attention-deficit/hyperactivity disorder
    Yoshifumi Mizuno, Minyoung Jung, Takashi X. Fujisawa, Shinichiro Takiguchi, Koji Shimada, Daisuke N. Saito, Hirotaka Kosaka, Akemi Tomoda · 2017 · Scientific Reports
49. Dysregulated Maturation of the Functional Connectome in Antipsychotic-Naïve, First-Episode Patients With Adolescent-Onset Schizophrenia
    Meiling Li, Benjamin Becker, Junjie Zheng, Yan Zhang, Heng Chen, Wei Liao, Xujun Duan, Hesheng Liu, Jingping Zhao, Huafu Chen · 2018 · Schizophrenia Bulletin
50. Altered resting functional network topology assessed using graph theory in youth with attention-deficit/hyperactivity disorder
    Yanpei Wang, Chenyi Zuo, Qinfang Xu, Shuirong Liao, Maihefulaiti Kanji, Daoyang Wang · 2019 · Progress in Neuro-Psychopharmacology and Biological Psychiatry
51. Social jetlag and sleep deprivation are associated with altered activity in the reward-related brain areas: an exploratory resting-state fMRI study
    Ruben Emanuel Nechifor, Dana Mihaela Ciobanu, Camelia Larisa Vonica, Cristian Popiţa, Gabriela Román, Cornelia Gabriela Bala, Andreia Mocan, Georgeta Inceu, Anca Elena Craciun, Adriana Rusu · 2020 · Sleep Medicine
52. Higher Sensitivity and Reproducibility of Wavelet-Based Amplitude of Resting-State fMRI
    Fei-Fei Luo, Jianbao Wang, Li‐Xia Yuan, Zhi-Wei Zhou, Hui Xu, Shaohui Ma, Yu‐Feng Zang, Ming Zhang · 2020 · Frontiers in Neuroscience
53. Functional disruption in prefrontal-striatal network in obsessive-compulsive disorder
    Zhiqiang Sha, Amelia Versace, Elliot Kale Edmiston, Jay C.J. Fournier, Simona Graur, Tsafrir Greenberg, João Paulo Lima Santos, Henry W. Chase, Richelle S. Stiffler, Lisa K. Bonar et al. · 2020 · Psychiatry Research Neuroimaging
54. Overarching Principles and Dimensions of the Functional Organization in the Inferior Parietal Cortex
    Gina F. Humphreys, Rebecca L. Jackson, Matthew A. Lambon Ralph · 2020 · Cerebral Cortex
55. Verification of a Central Pacemaker in Brain Stem by Phase-Coupling Analysis Between HR Interval- and BOLD-Oscillations in the 0.10–0.15 Hz Frequency Band
    Gert Pfurtscheller, Andreas Richard Schwerdtfeger, Beate Raßler, Alexandre Andrade, Gerhard Schwarz, Wolfgang Klimesch · 2020 · Frontiers in Neuroscience
56. Structural and functional alterations in untreated patients with major depressive disorder and bipolar disorder experiencing first depressive episode: A magnetic resonance imaging study combined with follow-up
    Xiaowei Jiang, Xinrui Wang, Linna Jia, Ting Sun, Jiahui Kang, Yifang Zhou, Shengnan Wei, Feng Wu, Lingtao Kong, Fei Wang et al. · 2020 · Journal of Affective Disorders
57. Divergent Alterations of Structural–Functional Connectivity Couplings in First-episode and Chronic Schizophrenia Patients
    Ling-yin Kong, Yuan-yuan Huang, Bingye Lei, Pengfei Ke, He-hua Li, Jing Zhou, Dong-sheng Xiong, Gui-xiang Li, Jun Chen, Xiao-bo Li et al. · 2021 · Neuroscience
58. Hypostability in the default mode network and hyperstability in the frontoparietal control network of dynamic functional architecture during rumination
    Xiao Chen, Chao‐Gan Yan · 2021 · NeuroImage
59. Disrupted intrinsic functional brain network in patients with late-life depression: Evidence from a multi-site dataset
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60. Gender differences in brain structure and resting-state functional connectivity related to narcissistic personality
    Wenjing Yang, Lingli Cun, Xue Du, Junyi Yang, Yanqiu Wang, Dongtao Wei, Qinglin Zhang, Jiang Qiu · 2015 · Scientific Reports
61. Expertise modulates local regional homogeneity of spontaneous brain activity in the resting brain: An fMRI study using the model of skilled acupuncturists
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62. Anatomical and functional brain abnormalities in unmedicated major depressive disorder
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63. Altered regional homogeneity and efficient response inhibition in restrained eaters
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64. Altered regional connectivity reflecting effects of different anaesthesia protocols in the mouse brain
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65. The correlation between mood states and functional connectivity within the default mode network can differentiate Internet gaming disorder from healthy controls
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66. Topological analyses of functional connectomics: A crucial role of global signal removal, brain parcellation, and null models
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67. At the heart of neurological dimensionality: Cross-nosological and multimodal cardiac interoceptive deficits
    Abrevaya, Sofía, Fittipaldi, Sol, García, Adolfo M., Dottori, Martin, Santamaria-Garcia, Hernando, Birba, Agustina, Yoris, Adrián, Hildebrandt, Malin Katharina, Salamone, Paula, De la Fuente, Alethia et al. · 2020 · Psychosomatic Medicine
68. Atrophy of right inferior frontal orbital gyrus and frontoparietal functional connectivity abnormality in depressed suicide attempters
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69. Alter spontaneous activity in amygdala and vmPFC during fear consolidation following 24 h sleep deprivation
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70. The Menstrual Cycle Modulates Whole-Brain Turbulent Dynamics
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71. Multi-site diagnostic classification of Autism spectrum disorder using adversarial deep learning on resting-state fMRI
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72. Constructing hierarchical attentive functional brain networks for early AD diagnosis
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73. Insulin Resistance-Associated Interhemispheric Functional Connectivity Alterations in T2DM: A Resting-State fMRI Study
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74. Regional homogeneity abnormalities in patients with transient ischaemic attack: A resting-state fMRI study
    Jian Guo, Ning Chen, Rong Li, Qizhu Wu, Huafu Chen, Qiyong Gong, Li He · 2013 · Clinical Neurophysiology
75. Alteration of spontaneous neuronal activity within the salience network in partially remitted depression
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76. A Brain‐wide association study of DISC1 genetic variants reveals a relationship with the structure and functional connectivity of the precuneus in schizophrenia
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77. Greater Loss of White Matter Integrity in Postural Instability and Gait Difficulty Subtype of Parkinson's Disease
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78. Abnormal default-mode network homogeneity and its correlations with personality in drug-naive somatization disorder at rest
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79. Aberrant interhemispheric functional and structural connectivity in heroin‐dependent individuals
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80. Mediation of episodic memory performance by the executive function network in patients with amnestic mild cognitive impairment: a resting-state functional MRI study
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81. Intrinsic Functional Connectivity Alterations of the Primary Visual Cortex in Primary Angle-Closure Glaucoma Patients before and after Surgery: A Resting-State fMRI Study
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82. Spontaneous alterations of regional brain activity in patients with adult generalized anxiety disorder
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83. An Effective Method to Identify Adolescent Generalized Anxiety Disorder by Temporal Features of Dynamic Functional Connectivity
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84. Re-Establishing Brain Networks in Patients with ESRD after Successful Kidney Transplantation
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85. Structural reorganization of the early visual cortex following Braille training in sighted adults
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86. Altered intrinsic brain activities in patients with acute eye pain using amplitude of low-frequency fluctuation: a resting-state fMRI study
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87. Orbitofrontal connectivity is associated with depression and anxiety in marijuana-using adolescents
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88. Compensatory Hippocampal Connectivity in Young Adults With Early-Stage Type 2 Diabetes
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89. The Graded Change in Connectivity across the Ventromedial Prefrontal Cortex Reveals Distinct Subregions
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90. Dynamics of Segregation and Integration in Directional Brain Networks: Illustration in Soldiers With PTSD and Neurotrauma
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91. The Impact of Emotional Music on Active ROI in Patients with Depression Based on Deep Learning: A Task-State fMRI Study
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92. Cognitive Control Network Homogeneity and Executive Functions in Late-Life Depression
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93. A Neural Signature of Parkinsonism in Patients With Schizophrenia Spectrum Disorders: A Multimodal MRI Study Using Parallel ICA
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94. Abnormal Regional Neural Activity and Reorganized Neural Network in Obesity: Evidence from Resting‐State fMRI
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95. Diagnosis of Alzheimer’s Disease Using Brain Network
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96. Classification of BOLD FMRI Signals using Wavelet Transform and Transfer Learning for Detection of Autism Spectrum Disorder
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97. Abnormal hemispheric asymmetry of both brain function and structure in attention deficit/hyperactivity disorder: a meta-analysis of individual participant data
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98. The anxiety‐specific hippocampus–prefrontal cortex pathways links to procrastination through self‐control
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99. Cost Effective Soft Sensing for Wastewater Treatment Facilities
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100. Altered default mode network causal connectivity patterns in autism spectrum disorder revealed by Liang information flow analysis
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