Lysosomal turnover, but not a cellular level, of endogenous LC3 is a marker for autophagy

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   Lee, Seon-Jin, Smith, Akaya, Guo, Lanping, Alastalo, Tero-Pekka, Li, Molong, Sawada, Hirofumi, Liu, Xiaoli, Chen, Zhi-Hua, Ifedigbo, Emeka, Jin, Yang et al. · 2011 · American Journal of Respiratory and Critical Care Medicine
2. Autophagy inhibition and antimalarials promote cell death in gastrointestinal stromal tumor (GIST)
   Anu Gupta, Srirupa Roy, Alexander J. Lazar, Wei‐Lien Wang, John Christopher McAuliffe, David Reynoso, James T. McMahon, Takahiro Taguchi, Giuseppe Floris, Maria Dêbiec‐Rychter et al. · 2010 · Proceedings of the National Academy of Sciences
3. Impaired autophagy by soluble endoglin, under physiological hypoxia in early pregnant period, is involved in poor placentation in preeclampsia
   Akitoshi Nakashima, Mikiko Tatematsu, Naonobu Fujita, Keiichi Koizumi, Tomoko Shima, Toshiko Yoshida, Toshio Nikaido, Aikou Okamoto, Tamotsu Yoshimori, Shigeru Saito · 2013 · Autophagy
4. Autophagic Stress in Neuronal Injury and Disease
   Chu, Charleen T. · 2006 · Journal of Neuropathology & Experimental Neurology
5. Neuronal-targeted TFEB rescues dysfunction of the autophagy-lysosomal pathway and alleviates ischemic injury in permanent cerebral ischemia
   Yueyang Liu, Xue Xue, Haotian Zhang, Xiaohang Che, Jing Luo, Ping Wang, Jiaoyan Xu, Xing Zheng, Linlin Yuan, Yinglu Liu et al. · 2018 · Autophagy
6. Starving Neurons Show Sex Difference in Autophagy
   Du, Lina, Hickey, Robert W., Bayir, Hülya, Watkins, Simon C., Tyurin, Vladimir A., Guo, Fengli, Kochanek, Patrick M., Jenkins, Larry W., Ren, Jin, Gibson, Greg et al. · 2009 · Journal of Biological Chemistry
7. Autophagy in Niemann–Pick C disease is dependent upon Beclin-1 and responsive to lipid trafficking defects
   Chris D. Pacheco, Robin Kunkel, Andrew P. Lieberman · 2007 · Human Molecular Genetics
8. Autophagy: Regulation and role in disease
   Alfred J. Meijer, Patrice Codogno · 2009 · Critical Reviews in Clinical Laboratory Sciences
9. Eating the endoplasmic reticulum: quality control by autophagy
   Tomohiro Yorimitsu, Daniel J. Klionsky · 2007 · Trends in Cell Biology
10. Autophagic removal of micronuclei
    Rello-Varona, Santiago, Lissa, Delphine, Shen, Shensi, Niso-Santano, Mireia, Senovilla, Laura, Mariño, Guillermo, Vitale, Ilio, Jemaá, Mohamed, Harper, Francis, Pierron, Gérard et al. · 2012 · Cell Cycle
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12. Cellular and molecular mechanisms in liver fibrogenesis
    Erica Novo, Stefania Cannito, Claudia Paternostro, Claudia Bocca, Antonella Miglietta, Maurizio Parola · 2014 · Archives of Biochemistry and Biophysics
13. Loss of hepatic chaperone‐mediated autophagy accelerates proteostasis failure in aging
    Jaime Laurel Schneider, Joan Villarroya, Antonio M. Díaz-Carretero, Bindi Patel, Aleksandra Malgorzata Urbanska, Mia M. Thi, Francesc Villarroya, Laura Santambrogio, Ana María Cuervo · 2015 · Aging Cell
14. A Potent and Selective ULK1 Inhibitor Suppresses Autophagy and Sensitizes Cancer Cells to Nutrient Stress
    Katie R. Martin, Stephanie L. Celano, Abigail R. Solitro, Hakan Günaydin, Mark Scott, Rónán C. O’Hagan, Stuart D. Shumway, Peter H. Fuller, Jeffrey P. MacKeigan · 2018 · iScience
15. mTORC 1 activation decreases autophagy in aging and idiopathic pulmonary fibrosis and contributes to apoptosis resistance in IPF fibroblasts
    Yair Romero, Marta Bueno, Remedios Ramı́rez, Diana Álvarez, John Sembrat, Elena A. Goncharova, Mauricio M. Rojas, Moisés Selman, Ana Lucia Mora, Annie Pardo · 2016 · Aging Cell
16. Time resolved study of cell death mechanisms induced by amine-modified polystyrene nanoparticles
    Fengjuan Wang, Mariana G. Bexiga, Sergio Anguissola, Patricia Boya, Jeremy C. Simpson, Anna Laura Salvati, Kenneth A. Dawson · 2013 · Nanoscale
17. Autophagy Is a Protective Mechanism for Human Melanoma Cells under Acidic Stress
    Marino, Maria Lucia, Pellegrini, Paola, Di Lernia, Giuseppe, Djavaheri-Mergny, Mojgan, Brnjic, Slavica, Zhang, Xiaonan, Hägg, Maria, Linder, Stig, Fais, Stefano, Codogno, Patrice et al. · 2012 · Journal of Biological Chemistry
18. Laforin, the most common protein mutated in Lafora disease, regulates autophagy
    Carmen Aguado, Sovan Sarkar, Viktor I. Korolchuk, Olga Criado‐García, Santiago Vernia, Patricia Boya, Pascual Sanz, Santiago Rodrı́guez de Córdoba, Erwin Knecht, David Chaim Rubinsztein · 2010 · Human Molecular Genetics
19. Disruption of Autophagy at the Maturation Step by the Carcinogen Lindane Is Associated with the Sustained Mitogen-Activated Protein Kinase/Extracellular Signal–Regulated Kinase Activity
    Elisabeth Corcelle–Termeau, Marielle Nebout, Soumeya Bekri, Nils C. Gauthier, Paul M Hofman, Philippe Poujeol, Patrick Fénichel, Baharia Mograbi · 2006 · Cancer Research
20. The role of autophagy in follicular development and atresia in rat granulosa cells
    Jong Yeob Choi, M. Jo, Eun Young Lee, Byung-Koo Yoon, Doo Seok Choi · 2010 · Fertility and Sterility
21. Assaying autophagic activity in transgenic GFP-Lc3 and GFP-Gabarap zebrafish embryos
    Congcong He, Clinton R. Bartholomew, Weibin Zhou, Daniel J. Klionsky · 2009 · Autophagy
22. Involvement of Protective Autophagy in TRAIL Resistance of Apoptosis-defective Tumor Cells
    Jie Han, Wen Hou, Leslie A. Goldstein, Caisheng Lu, Donna Beer Stolz, Xiao‐Ming Yin, Hannah Rabinowich · 2008 · Journal of Biological Chemistry
23. Chapter 1 Biochemical Methods to Monitor Autophagy‐Related Processes in Yeast
    Heesun Cheong, Daniel J. Klionsky · 2008 · Methods in enzymology on CD-ROM/Methods in enzymology
24. Autophagy as a therapeutic target in cardiovascular disease
    Andriy Nemchenko, Mario Chiong, Aslan Teyfik Turer, Sergio Lavandero, Joseph A. Hill · 2011 · Journal of Molecular and Cellular Cardiology
25. Protective role of autophagy against <i>Vibrio cholerae</i> cytolysin, a pore-forming toxin from <i>V. cholerae</i>
    Gutierrez, Maximiliano Gabriel, Saka, Hector Alex, Chinen, Isabel, Zoppino, Felipe C. M., Yoshimori, Tamotsu, Bocco, Jose Luis, Colombo, María Isabel · 2007 · Proceedings of the National Academy of Sciences
26. Autophagy and its role in gastric cancer
    Yijing Cao, Yichen Luo, Juan Zou, Jun Ouyang, Zhihong Cai, Xi Zeng, Hui Yvonne Ling, Tiebing Zeng · 2018 · Clinica Chimica Acta
27. Balance between autophagic pathways preserves retinal homeostasis
    Natalia Rodríguez‐Muela, Hiroshi Koga, Lucía García‐Ledo, Pedro de la Villa, Enrique J. de la Rosa, Ana María Cuervo, Patricia Boya · 2013 · Aging Cell
28. Suppressing glucose metabolism with epigallocatechin-3-gallate (EGCG) reduces breast cancer cell growth in preclinical models
    Ran Wei, Limin Mao, Ping Xu, Xinghai Zheng, Robert M. Hackman, Gerardo Guillermo Mackenzie, Yuefei Wang · 2018 · Food & Function
29. Functions of Autophagy in Hepatic and Pancreatic Physiology and Disease
    Mark J. Czaja · 2011 · Gastroenterology
30. Autophagy upregulation by inhibitors of caspase-3 and mTOR enhances radiotherapy in a mouse model of lung cancer
    Kwang Woon Kim, Misun Hwang, Luigi Moretti, Jerry Jeff Jaboin, Yong I. Cha, Jiahong Lu · 2008 · Autophagy
31. Autophagy in colorectal cancer: An important switch from physiology to pathology
    Florin Burada · 2015 · World Journal of Gastrointestinal Oncology
32. Modification of Cellular Autophagy Protein LC3 by Poliovirus
    Matthew P. Taylor, Karla Kirkegaard · 2007 · Journal of Virology
33. MiR-22 regulates 5-FU sensitivity by inhibiting autophagy and promoting apoptosis in colorectal cancer cells
    Honghe Zhang, Jinlong Tang, Chen Li, Jianlu Kong, Jingyu Wang, Yihua Wu, Enping Xu, Maode Lai · 2014 · Cancer Letters
34. Mitophagy mediated by BNIP3 and NIX protects against ferroptosis by downregulating mitochondrial reactive oxygen species
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35. Untangling Autophagy Measurements
    Roberta A. Gottlieb, Allen M. Andres, Jon Sin, DAVID J. TAYLOR · 2015 · Circulation Research
36. Bafilomycin A1 Inhibits Chloroquine-Induced Death of Cerebellar Granule Neurons
    John J. Shacka, Barbara J. Klocke, Masahiro Shibata, Yasuo Uchiyama, Geeta Datta, Robert E. Schmidt, Kevin Aaron Roth · 2006 · Molecular Pharmacology
37. Electroacupuncture ameliorates beta-amyloid pathology and cognitive impairment in Alzheimer disease via a novel mechanism involving activation of TFEB (transcription factor EB)
    Xiaoyan Zheng, Wenjia Lin, Yimin Jiang, Kejia Lu, Wenjing Wei, Qingwei Huo, Shaoyang Cui, Xifei Yang, Min Li, Nenggui Xu et al. · 2021 · Autophagy
38. BORC coordinates encounter and fusion of lysosomes with autophagosomes
    Jia, Rui, Guardia, Carlos M., Pu, Jing, Chen, Yu, Bonifacino, Juan S. · 2017 · Autophagy
39. ATM-mediated PTEN phosphorylation promotes PTEN nuclear translocation and autophagy in response to DNA-damaging agents in cancer cells
    Jing-Hong Chen, Peng Zhang, Wen-Dan Chen, Dandan Li, Xiao-Qi Wu, Rong Deng, Lin Jiao, Xuan Li, Jiao Ji, Gong‐Kan Feng et al. · 2015 · Autophagy
40. Utilizing flow cytometry to monitor autophagy in living mammalian cells
    Elena Shvets, Ephraim Fass, Zvulun Elazar · 2008 · Autophagy
41. Autophagy promotes necrosis in apoptosis-deficient cells in response to ER stress
    Ullman, E, Fan, Y, Stawowczyk, M, Chen, H-M, Yue, Z, Zong, W-X · 2008 · Cell Death &amp; Differentiation
42. Atg9A trafficking through the recycling endosomes is required for autophagosome formation
    Kenta Imai, Feike Hao, Naonobu Fujita, Yasuhiro Tsuji, Yukako Oe, Yasuhiro Araki, Maho Hamasaki, Takeshi Noda, Tamotsu Yoshimori · 2016 · Journal of Cell Science
43. Chapter 2 Methods for Monitoring Autophagy Using GFP‐LC3 Transgenic Mice
    Noboru Mizushima · 2009 · Methods in enzymology on CD-ROM/Methods in enzymology
44. Constitutive autophagy: vital role in clearance of unfavorable proteins in neurons
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45. A novel method for autophagy detection in primary cells: Impaired levels of macroautophagy in immunosenescent T cells
    Phadwal, Kanchan, Alegre-Abarrategui, Javier, Watson, Alexander Scarth, Pike, Luke, Anbalagan, Selvakumar, Hammond, Ester M., Wade-Martins, Richard, McMichael, Andrew, Klenerman, Paul, Simon, Anna Katharina · 2012 · Autophagy
46. Coxsackievirus Infection Induces Autophagy-Like Vesicles and Megaphagosomes in Pancreatic Acinar Cells In Vivo
    Christopher C. Kemball, Mehrdad Alirezaei, Claudia T. Flynn, Malcolm R. Wood, Stephanie Harkins, William Bill Kiosses, J. Lindsay Whitton · 2010 · Journal of Virology
47. MBSJ MCC Young Scientist Award 2009 REVIEW: Selective autophagy regulates various cellular functions
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48. Measurement of Autophagy in Cells and Tissues
    Isei Tanida, Satoshi Waguri · 2010 · Methods in molecular biology
49. The Interplay between Pro-Death and Pro-Survival Signaling Pathways in Myocardial Ischemia/Reperfusion Injury: Apoptosis Meets Autophagy
    Anne Hamacher‐Brady, Nathan Ryan Brady, Roberta A. Gottlieb · 2006 · Cardiovascular Drugs and Therapy
50. Rice Stripe Virus Interferes with S-acylation of Remorin and Induces Its Autophagic Degradation to Facilitate Virus Infection
    Shuai Fu, Yi Xu, Chenyang Li · 2017 · Molecular Plant
51. New Insights into the Mechanisms of Macroautophagy in Mammalian Cells
    Eeva‐Liisa Eskelinen · 2008 · International review of cytology
52. The role of autophagy in hepatocellular carcinoma: friend or foe
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53. Autophagy in cardiovascular disease
    Wim Martinet, Michiel Knaapen, Mark M. Kockx, Guido R.Y. De Meyer · 2007 · Trends in Molecular Medicine
54. Targeting Autophagy for Cancer Treatment and Tumor Chemosensitization
    Marta Pérez-Hernández, Alain Arias, David Martínez‐García, Ricardo Pérez‐Tomás, Roberto Quesada, Vanessa Soto‐Cerrato · 2019 · Cancers
55. Neuromelanin organelles are specialized autolysosomes that accumulate undegraded proteins and lipids in aging human brain and are likely involved in Parkinson’s disease
    Fabio Andrea Zucca, Renzo Vanna, Francesca Anna Cupaioli, Chiara Bellei, Antonella De Palma, Dario Di Silvestre, Pierluigi Mauri, Sara Grassi, Alessandro Prinetti, Luigi Casella et al. · 2018 · npj Parkinson s Disease
56. A ginseng metabolite, compound K, induces autophagy and apoptosis via generation of reactive oxygen species and activation of JNK in human colon cancer cells
    A D Kim, Kyoung Ah Kang, H. S. Kim, D H Kim, Yung Hyun Choi, Sieun Lee, Hyun-Seok Kim, Jin Won Hyun · 2013 · Cell Death and Disease
57. A novel quantitative flow cytometry-based assay for autophagy
    Eng, Kai Er, Panas, Marc D., Hedestam, Gunilla B. Karlsson, McInerney, Gerald M. · 2010 · Autophagy
58. Two-Photon Fluorescent Probe for Monitoring Autophagy via Fluorescence Lifetime Imaging
    Liling Hou, Peng Ning, Yan Feng, Yaqi Ding, Lei Bai, Lin Li, Haizhu Yu, Xiangming Meng · 2018 · Analytical Chemistry
59. Characterization of macroautophagic flux in vivo using a leupeptin-based assay
    Haspel, Jeffrey, Shaik, Rahamthulla S., Ifedigbo, Emeka, Nakahira, Kiichi, Dolinay, Tamas, Englert, Joshua A., Choi, Augustine M.K. · 2011 · Autophagy
60. Following Cytochrome <i>c</i> Release, Autophagy Is Inhibited during Chemotherapy-Induced Apoptosis by Caspase 8–Mediated Cleavage of Beclin 1
    Li, Hua, Wang, Peng, Sun, Quanhong, Ding, Wen-Xing, Yin, Xiao-Ming, Sobol, Robert W., Stolz, Donna B., Yu, Jian, Zhang, Lin · 2011 · Cancer Research
61. Primary-cilium-dependent autophagy controls epithelial cell volume in response to fluid flow
    Idil Orhon, Nicolas Dupont, Mohamad Zaidan, Valérie Boitez, Martine Burtin, Alain Schmitt, Thierry Capiod, Amandine Viau, Isabelle Beau, E. Wolfgang Kuehn et al. · 2016 · Nature Cell Biology
62. A combination of indole-3-carbinol and genistein synergistically induces apoptosis in human colon cancer HT-29 cells by inhibiting Akt phosphorylation and progression of autophagy
    Yoshitaka Nakamura, Shingo Yogosawa, Yasuyuki Izutani, Hirotsuna Watanabe, Eigo Otsuji, T Sakai · 2009 · Molecular Cancer
63. Real-Time Monitoring Mitochondrial Viscosity during Mitophagy Using a Mitochondria-Immobilized Near-Infrared Aggregation-Induced Emission Probe
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64. Premature aging in mice activates a systemic metabolic response involving autophagy induction
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65. Porcine reproductive and respiratory syndrome virus induces autophagy to promote virus replication
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66. Autophagic Cell Death of Human Pancreatic Tumor Cells Mediated by Oleandrin, a Lipid-Soluble Cardiac Glycoside
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67. Roles of endoplasmic reticulum stress and autophagy on H2O2‑induced oxidative stress injury in HepG2 cells
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68. Autophagy enhances the replication of classical swine fever virus in vitro
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69. Intracellular Vesicle Acidification Promotes Maturation of Infectious Poliovirus Particles
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70. Connexins modulate autophagosome biogenesis
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71. Self‐Assembled Autophagy‐Inducing Polymeric Nanoparticles for Breast Cancer Interference In‐Vivo
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72. Legionella pneumophila S1P-lyase targets host sphingolipid metabolism and restrains autophagy
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73. The Antioxidant Transcription Factor Nrf2 Negatively Regulates Autophagy and Growth Arrest Induced by the Anticancer Redox Agent Mitoquinone
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74. The autophagic response to nutrient deprivation in the hl‐1 cardiac myocyte is modulated by Bcl‐2 and sarco/endoplasmic reticulum calcium stores
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75. Curcumin targets the TFEB-lysosome pathway for induction of autophagy
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76. Host Cell Autophagy Is Induced by Toxoplasma gondii and Contributes to Parasite Growth*
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77. DAPK-1 Binding to a Linear Peptide Motif in MAP1B Stimulates Autophagy and Membrane Blebbing
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78. Metformin impairs growth of endometrial cancer cells via cell cycle arrest and concomitant autophagy and apoptosis
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79. Induction of apoptosis and autophagy by sodium selenite in A549 human lung carcinoma cells through generation of reactive oxygen species
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80. Autophagy in Diabetic Retinopathy
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81. Loss of Macroautophagy Promotes or Prevents Fibroblast Apoptosis Depending on the Death Stimulus
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82. Glutamine Increases Autophagy Under Basal and Stressed Conditions in Intestinal Epithelial Cells
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83. Chapter 13 Cytosolic LC3 Ratio as a Quantitative Index of Macroautophagy
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84. Carbon Monoxide Activates Autophagy via Mitochondrial Reactive Oxygen Species Formation
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85. Fusobacterium nucleatum confers chemoresistance by modulating autophagy in oesophageal squamous cell carcinoma
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86. Disruption of ceramide synthesis by CerS2 down-regulation leads to autophagy and the unfolded protein response
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87. Melatonin treatment induces interplay of apoptosis, autophagy, and senescence in human colorectal cancer cells
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89. β‐Amyloid is a substrate of autophagy in sporadic inclusion body myositis
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91. Rapamycin and fasting sustain autophagy response activated by ischemia/reperfusion injury and promote retinal ganglion cell survival
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92. Single-Walled Carbon Nanotubes Alleviate Autophagic/Lysosomal Defects in Primary Glia from a Mouse Model of Alzheimer’s Disease
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93. Acquired Cisplatin Resistance in Human Lung Adenocarcinoma Cells Is Associated with Enhanced Autophagy
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94. Glutamate excitotoxicity in neurons triggers mitochondrial and endoplasmic reticulum accumulation of Parkin, and, in the presence of N-acetyl cysteine, mitophagy
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95. Multiple mechanisms of germ cell loss in the perinatal mouse ovary
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96. A Role for Presenilins in Autophagy Revisited: Normal Acidification of Lysosomes in Cells Lacking PSEN1 and PSEN2
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98. Salidroside induces apoptosis and autophagy in human colorectal cancer cells through inhibition of PI3K/Akt/mTOR pathway
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99. miR-29c-3p inhibits autophagy and cisplatin resistance in ovarian cancer by regulating FOXP1/ATG14 pathway
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100. TOM40 Targets Atg2 to Mitochondria-Associated ER Membranes for Phagophore Expansion
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