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Demographic reconstruction from ancient DNA supports rapid extinction of the great auk
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The great auk was once abundant and distributed across the North Atlantic. It is now extinct, having been heavily exploited for its eggs, meat, and feathers. We investigated the impact of human hunting on its demise by integrating genetic data, GPS-based ocean current data, and analyses of population viability. We sequenced complete mitochondrial genomes of 41 individuals from across the species’ geographic range and reconstructed population structure and population dynamics throughout the Holocene. Taken together, our data do not provide any evidence that great auks were at risk of extinction prior to the onset of intensive human hunting in the early 16th century. In addition, our population viability analyses reveal that even if the great auk had not been under threat by environmental change, human hunting alone could have been sufficient to cause its extinction. Our results emphasise the vulnerability of even abundant and widespread species to intense and localised exploitation.
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Human activities can mediate species demise through mechanisms including direct over-exploitation, as shown in moas and great auks.
“Human activities have been found to possibly mediate species demise through various mechanisms, including direct over-exploitation, as shown in moas 314 and great auks 315 .”
From Ancient DNA analysis (2021) · cites this paper as [314]
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mapDamage2.0: fast approximate Bayesian estimates of ancient DNA damage parameters
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Self-citation
Metadata
- Authors
- Thomas, J. E., Carvalho, G. R., Haile, J., Rawlence, N. J., Martin, M. D., Ho, S. Y., Sigfússon, A. Þ., Jósefsson, V. A., Frederiksen, M., Linnebjerg, J. F., Samaniego Castruita, J. A., Niemann, J., Sinding, M.-H. S., Sandoval-Velasco, M., Soares, A. E., Lacy, R., Barilaro, C., Best, J., Brandis, D., Cavallo, C., Elorza, M., Garrett, K. L., Groot, M., Johansson, F., Lifjeld, J. T., Nilson, G., Serjeanston, D., Sweet, P., Fuller, E., Hufthammer, A. K., Meldgaard, M., Fjeldså, J., Shapiro, B., Hofreiter, M., Stewart, J. R., Gilbert, M. T. P., & Knapp, M.
- Affiliations
- University of Copenhagen (DK)
- Bangor University (GB)
- University of Otago (NZ)
- Norwegian University of Science and Technology (NO)
- The University of Sydney (AU)
- Verkís Consulting Engineers, Reykjavik, Iceland
- Aarhus University (DK)
- Natural History Museum of Denmark, University of Copenhagen, Copenhagen, Denmark
- University of California, Santa Cruz (US)
- Brookfield Zoo Chicago (US)
- Landesmuseum Natur und Mensch Oldenburg, Oldenburg, Germany
- Cardiff University (GB)
- Christian-Albrechts-Universität zu Kiel (DE)
- University of Amsterdam (NL)
- Sociedad de Ciencias Aranzadi (ES)
- Natural History Museum of Los Angeles County (US)
- Freie Universität Berlin (DE)
- Gothenburg Natural History Museum (SE)
- University of Oslo (NO)
- University of Southampton (GB)
- American Museum of Natural History (US)
- Independent researcher, Kent, United Kingdom
- University of Bergen (NO)
- Ilisimatusarfik (GL)
- University of Potsdam (DE)
- Bournemouth University (GB)
- Corresponding author
- Thomas, Jessica E
- Knapp, Michael
- ORCID
- Thomas, Jessica E
- Carvalho, Gary R
- Haile, James
- Rawlence, Nicolas J
- Martin, Michael D
- Ho, Simon YW
- Frederiksen, Morten
- Linnebjerg, Jannie F
- Niemann, Jonas
- Sinding, Mikkel-Holger S
- Soares, André ER
- Lacy, Robert
- Brandis, Dirk
- Cavallo, Chiara
- Elorza, Mikelo
- Groot, Maaike
- Lifjeld, Jan T
- Fuller, Errol
- Hufthammer, Anne Karin
- Meldgaard, Morten
- Fjeldså, Jon
- Shapiro, Beth
- Hofreiter, Michael
- Stewart, John R
- Gilbert, M Thomas P
- Knapp, Michael
- Venue
- eLife
- Publisher
- eLife Sciences Publications, Ltd
- Published
- 2019-11-26
- Volume
- 8
- ISSN
- 2050-084X (ISSN-L)
- PMC
- PMC6879203
- OpenAlex
- W2990684842
- Cited by
- 29
- References
- 2
- Citations by year
- 2026: 2 · 2025: 3 · 2024: 5 · 2023: 5 · 2022: 5 · 2021: 6 · 2020: 2 · 2019: 1
- FWCI
- 1.80
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Licence
- Locations
- eLife (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- Research at the University of Copenhagen (University of Copenhagen) (publishedVersion, cc-by)
- ORCA Online Research @Cardiff (Cardiff University) (acceptedVersion)
- UvA-DARE (University of Amsterdam) (submittedVersion, cc-by)
- Bournemouth University Research Online (Bournemouth University) (submittedVersion)
- NORA - Norwegian Open Research Archives (submittedVersion, cc-by)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion, cc-by-sa)
- eScholarship (California Digital Library) (submittedVersion, cc-by)
- publish.UP (University of Potsdam) (submittedVersion)
- Bangor University Research Portal (Bangor University) (submittedVersion, other-oa)
- Funders
- NERC Environmental Bioinformatics Centre (NE/L501694/1)
- European Research Council (681396-Extinction Genomics)
- Genetics Society (Heredity Fieldwork Grant)
- European Society for Evolutionary Biology (Godfrey Hewitt Mobility Award)
- Royal Society of New Zealand (Rutherford Discovery Fellowship)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Genetic diversity and population structure
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Forensic and Genetic Research
- Physical Sciences › Environmental Science › Ecology › Avian ecology and behavior
- Keywords
- Great Auk, Pinguinus impennis, extinction, human hunting, population viability analysis, population structure, mitochondrial genome, ancient DNA, overexploitation, extinction risk
- MeSH terms
- DNA, Ancient, Animals, DNA, Mitochondrial, Humans, Phylogeny, Population Dynamics, Genetic Variation, Charadriiformes, Extinction, Biological, Genome, Mitochondrial
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