Prüfer, Kay

A draft sequence of the Neandertal genome

Green, R. E., Krause, J., Briggs, A. W., Maricic, T., Stenzel, U., Kircher, M., Patterson, N., Li, H., Zhai, W., Fritz, M. H.-Y., et al. (2010) · Science

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 4,318

The complete genome sequence of a Neanderthal from the Altai Mountains

Prüfer, K., Racimo, F., Patterson, N., Jay, F., Sankararaman, S., Sawyer, S., Heinze, A., Renaud, G., Sudmant, P. H., de Filippo, C., et al. (2014) · Nature

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 2,254

A high-coverage genome sequence from an archaic denisovan individual

Meyer, M., Kircher, M., Gansauge, M.-T., Li, H., Racimo, F., Mallick, S., Schraiber, J. G., Jay, F., Prüfer, K., de Filippo, C., et al. (2012) · Science

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 1,967

Ancient human genomes suggest three ancestral populations for present-day Europeans

Lazaridis, I., Patterson, N., Mittnik, A., Renaud, G., Mallick, S., Kirsanow, K., Sudmant, P. H., Schraiber, J. G., Castellano, S., Lipson, M., et al. (2014) · Nature

Forensic and Genetic ResearchGenetic diversity and population structure

Cited by 1,357

The genomic landscape of Neanderthal ancestry in present-day humans

Sankararaman, S., Mallick, S., Dannemann, M., Prüfer, K., Kelso, J., Pääbo, S., Patterson, N., & Reich, D. (2014) · Nature

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 1,107

Genome sequence of a 45,000-year-old modern human from western Siberia

Fu, Q., Li, H., Moorjani, P., Jay, F., Slepchenko, S. M., Bondarev, A. A., Johnson, P. L. F., Aximu-Petri, A., Prüfer, K., de Filippo, C., et al. (2014) · Nature

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 1,023

Patterns of damage in genomic DNA sequences from a neandertal

Briggs, A. W., Stenzel, U., Johnson, P. L. F., Green, R. E., Kelso, J., Prüfer, K., Meyer, M., Krause, J., Ronan, M. T., Lachmann, M., et al. (2007) · Proceedings of the National Academy of Sciences

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 981

An early modern human from Romania with a recent Neanderthal ancestor

Fu, Q., Hajdinjak, M., Moldovan, O. T., Constantin, S., Mallick, S., Skoglund, P., Patterson, N., Rohland, N., Lazaridis, I., Nickel, B., et al. (2015) · Nature

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 802

A high-coverage Neandertal genome from Vindija Cave in Croatia

Prüfer, K., de Filippo, C., Grote, S., Mafessoni, F., Korlević, P., Hajdinjak, M., Vernot, B., Skov, L., Hsieh, P., Peyrégne, S., et al. (2017) · Science

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 719

Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion

Florio, M., Albert, M., Taverna, E., Namba, T., Brandl, H., Lewitus, E., Haffner, C., Sykes, A., Wong, F. K., Peters, J., et al. (2015) · Science

Neurogenesis and neuroplasticity mechanismsDevelopmental Biology and Gene Regulation

Cited by 632

Nuclear DNA sequences from the Middle Pleistocene Sima de los Huesos hominins

Meyer, M., Arsuaga, J.-L., de Filippo, C., Nagel, S., Aximu-Petri, A., Nickel, B., Martínez, I., Gracia, A., de Castro, J. M. B., Carbonell, E., et al. (2016) · Nature

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 584

The bonobo genome compared with the chimpanzee and human genomes

Prüfer, K., Munch, K., Hellmann, I., Akagi, K., Miller, J. R., Walenz, B., Koren, S., Sutton, G., Kodira, C., Winer, R., et al. (2012) · Nature

Genomics and Phylogenetic StudiesPrimate Behavior and Ecology

Cited by 579

Neandertal and Denisovan DNA from Pleistocene sediments

Slon, V., Hopfe, C., Weiß, C. L., Mafessoni, F., de la Rasilla, M., Lalueza-Fox, C., Rosas, A., Soressi, M., Knul, M. V., Miller, R., et al. (2017) · Science

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 465

Neanderthals in central Asia and Siberia

Krause, J., Orlando, L., Serre, D., Viola, B., Prüfer, K., Richards, M. P., Hublin, J.-J., Hänni, C., Derevianko, A. P., & Pääbo, S. (2007) · Nature

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 333

A high-coverage Neandertal genome from Chagyrskaya Cave

Mafessoni, F., Grote, S., de Filippo, C., Slon, V., Kolobova, K. A., Viola, B., Markin, S. V., Chintalapati, M., Peyrégne, S., Skov, L., et al. (2020) · Proceedings of the National Academy of Sciences

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 309

Reconstructing the DNA Methylation Maps of the Neandertal and the Denisovan

Gokhman, D., Lavi, E., Prüfer, K., Fraga, M. F., Riancho, J. A., Kelso, J., Pääbo, S., Meshorer, E., & Carmel, L. (2014) · Science

Epigenetics and DNA MethylationPleistocene-Era Hominins and Archaeology

Cited by 221

The neandertal genome and ancient DNA authenticity

Green, R. E., Briggs, A. W., Krause, J., Prüfer, K., Burbano, H. A., Siebauer, M., Lachmann, M., & Pääbo, S. (2009) · The EMBO Journal

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 190

Computational challenges in the analysis of ancient DNA

Prüfer, K., Stenzel, U., Hofreiter, M., Pääbo, S., Kelso, J., & Green, R. E. (2010) · Genome Biology

Genomics and Phylogenetic StudiesForensic and Genetic Research

Cited by 155

Detecting ancient positive selection in humans using extended lineage sorting

Peyrégne, S., Boyle, M. J., Dannemann, M., & Prüfer, K. (2017) · Genome Research

Forensic and Genetic ResearchEvolution and Genetic Dynamics

Cited by 93

Functional implications of Neandertal introgression in modern humans

Dannemann, M., Prüfer, K., & Kelso, J. (2017) · Genome biology

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 92

Nuclear DNA from two early Neandertals reveals 80,000 years of genetic continuity in Europe

Peyrégne, S., Slon, V., Mafessoni, F., de Filippo, C., Hajdinjak, M., Nagel, S., Nickel, B., Essel, E., Le Cabec, A., Wehrberger, K., et al. (2019) · Science Advances

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 82

snpAD: an ancient DNA genotype caller

Prüfer, K. (2018) · Bioinformatics

Genomics and Phylogenetic StudiesForensic and Genetic Research

Cited by 78

Earliest modern human genomes constrain timing of Neanderthal admixture

Sümer, A. P., Rougier, H., Villalba-Mouco, V., Huang, Y., Iasi, L. N. M., Essel, E., Bossoms Mesa, A., Furtwaengler, A., Peyrégne, S., de Filippo, C., et al. (2025) · Nature

Pleistocene-Era Hominins and ArchaeologyForensic and Genetic Research

Cited by 58

Quantifying and reducing spurious alignments for the analysis of ultra-short ancient DNA sequences

de Filippo, C., Meyer, M., & Prüfer, K. (2018) · BMC Biology

Genomics and Phylogenetic StudiesForensic and Genetic Research

Cited by 53