Raes, Jeroen

Primary sclerosing cholangitis is characterised by intestinal dysbiosis independent from IBD

Sabino, J., Vieira-Silva, S., Machiels, K., Joossens, M., Falony, G., Ballet, V., Ferrante, M., Van Assche, G., Van der Merwe, S., Vermeire, S., et al. (2016) · Gut

Gut microbiota and healthLiver Diseases and Immunity

Cited by 413

Integrated Metagenomics/Metaproteomics Reveals Human Host-Microbiota Signatures of Crohn's Disease

Erickson, A. R., Cantarel, B. L., Lamendella, R., Darzi, Y., Mongodin, E. F., Pan, C., Shah, M., Halfvarson, J., Tysk, C., Henrissat, B., et al. (2012) · PLoS ONE

Gut microbiota and healthInflammatory Bowel Disease

Cited by 395

Microglia Require CD4 T Cells to Complete the Fetal-to-Adult Transition

Pasciuto, E., Burton, O. T., Roca, C. P., Lagou, V., Rajan, W. D., Theys, T., Mancuso, R., Tito, R. Y., Kouser, L., Callaerts-Vegh, Z., et al. (2020) · Cell

Neuroinflammation and Neurodegeneration MechanismsT-cell and B-cell Immunology

Cited by 368

Intestinal microbiota and diet in IBS: causes, consequences, or epiphenomena?

Rajilić-Stojanović, M., Jonkers, D. M., Salonen, A., Hanevik, K., Raes, J., Jalanka, J., de Vos, W. M., Manichanh, C., Golic, N., Enck, P., et al. (2015) · American Journal of Gastroenterology

Gastrointestinal motility and disordersGut microbiota and health

Cited by 359

Towards microbial fermentation metabolites as markers for health benefits of prebiotics

Verbeke, K. A., Boobis, A. R., Chiodini, A., Edwards, C. A., Franck, A., Kleerebezem, M., Nauta, A., Raes, J., van Tol, E. A. F., & Tuohy, K. M. (2015) · Nutrition Research Reviews

Gut microbiota and healthMicrobial Metabolites in Food Biotechnology

Cited by 343

Local immune response to food antigens drives meal-induced abdominal pain

Aguilera-Lizarraga, J., Florens, M. V., Viola, M. F., Jain, P., Decraecker, L., Appeltans, I., Cuende-Estevez, M., Fabre, N., Van Beek, K., Perna, E., et al. (2021) · Nature

Gastrointestinal motility and disordersMast cells and histamine

Cited by 311

Donor species richness determines faecal microbiota transplantation success in inflammatory bowel disease

Vermeire, S., Joossens, M., Verbeke, K., Wang, J., Machiels, K., Sabino, J., Ferrante, M., Van Assche, G., Rutgeerts, P., & Raes, J. (2016) · Journal of Crohn s and Colitis

Inflammatory Bowel DiseaseGut microbiota and health

Cited by 311

Monocyte-driven atypical cytokine storm and aberrant neutrophil activation as key mediators of COVID-19 disease severity

Vanderbeke, L., Van Mol, P., Van Herck, Y., De Smet, F., Humblet-Baron, S., Martinod, K., Antoranz, A., Arijs, I., Boeckx, B., Bosisio, F. M., et al. (2021) · Nature Communications

COVID-19 Clinical Research StudiesSARS-CoV-2 and COVID-19 Research

Cited by 247

Fecal Microbiota Transplantation Reduces Symptoms in Some Patients With Irritable Bowel Syndrome With Predominant Abdominal Bloating: Short- and Long-term Results From a Placebo-Controlled Randomized Trial

Holvoet, T., Joossens, M., Vázquez-Castellanos, J. F., Christiaens, E., Heyerick, L., Boelens, J., Verhasselt, B., van Vlierberghe, H., De Vos, M., Raes, J., et al. (2021) · Gastroenterology

Gastrointestinal motility and disordersGut microbiota and health

Cited by 201

Microbiology Meets Big Data: The Case of Gut Microbiota–Derived Trimethylamine

Falony, G., Vieira-Silva, S., & Raes, J. (2015) · Annual Review of Microbiology

Gut microbiota and healthGenomics and Phylogenetic Studies

Cited by 187

Nlrp6- and ASC-Dependent Inflammasomes Do Not Shape the Commensal Gut Microbiota Composition

Mamantopoulos, M., Ronchi, F., Van Hauwermeiren, F., Vieira-Silva, S., Yilmaz, B., Martens, L., Saeys, Y., Drexler, S. K., Yazdi, A. S., Raes, J., et al. (2017) · Immunity

Gut microbiota and healthInflammasome and immune disorders

Cited by 181

Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean

Delmont, T. O., Gaia, M., Hinsinger, D. D., Frémont, P., Vanni, C., Fernandez-Guerra, A., Eren, A. M., Kourlaiev, A., d'Agata, L., Clayssen, Q., et al. (2022) · Cell Genomics

Protist diversity and phylogenyGenomics and Phylogenetic Studies

Cited by 173

The gut microbiome and mental health: implications for anxiety- and trauma-related disorders

Malan-Muller, S., Valles-Colomer, M., Raes, J., Lowry, C. A., Seedat, S., & Hemmings, S. M. J. (2018) · OMICS: A Journal of Integrative Biology

Gut microbiota and healthGastrointestinal motility and disorders

Cited by 161

Impairment of gut microbial biotin metabolism and host biotin status in severe obesity: effect of biotin and prebiotic supplementation on improved metabolism

Belda, E., Voland, L., Tremaroli, V., Falony, G., Adriouch, S., Assmann, K. E., Prifti, E., Aron-Wisnewsky, J., Debédat, J., Le Roy, T., et al. (2022) · Gut

Gut microbiota and healthBiotin and Related Studies

Cited by 140

Safety and efficacy of faecal microbiota transplantation in patients with mild to moderate Parkinson's disease (GUT-PARFECT): a double-blind, placebo-controlled, randomised, phase 2 trial

Bruggeman, A., Vandendriessche, C., Hamerlinck, H., De Looze, D., Tate, D. J., Vuylsteke, M., De Commer, L., Devolder, L., Raes, J., Verhasselt, B., et al. (2024) · eClinicalMedicine

Parkinson's Disease Mechanisms and TreatmentsGut microbiota and health

Cited by 139

Depression and suicidality: A link to premature T helper cell aging and increased Th17 cells

Schiweck, C., Valles-Colomer, M., Arolt, V., Müller, N., Raes, J., Wijkhuijs, A., Claes, S., Drexhage, H., & Vrieze, E. (2020) · Brain, Behavior, and Immunity

Tryptophan and brain disordersStress Responses and Cortisol

Cited by 114

Benchmarking microbiome transformations favors experimental quantitative approaches to address compositionality and sampling depth biases

Lloréns-Rico, V., Vieira-Silva, S., Gonçalves, P. J., Falony, G., & Raes, J. (2021) · Nature Communications

Gut microbiota and healthGenomics and Phylogenetic Studies

Cited by 73

Caspase deficiency alters the murine gut microbiome

Brinkman, B. M., Hildebrand, F., Kubica, M., Goosens, D., Del Favero, J., Declercq, W., Raes, J., & Vandenabeele, P. (2011) · Cell Death & Disease

Gut microbiota and healthGastrointestinal motility and disorders

Cited by 70

Metformin induces weight loss associated with gut microbiota alteration in non-diabetic obese women: a randomized double-blind clinical trial

Ejtahed, H.-S., Tito, R. Y., Siadat, S.-D., Hasani-Ranjbar, S., Hoseini-Tavassol, Z., Rymenans, L., Verbeke, K., Soroush, A.-R., Raes, J., & Larijani, B. (2019) · European Journal of Endocrinology

Gut microbiota and healthPharmacology and Obesity Treatment

Cited by 63

Sa1922 Pilot Study on the Safety and Efficacy of Faecal Microbiota Transplantation in Refractory Crohn's Disease

Vermeire, S., Joossens, M., Verbeke, K., Hildebrand, F., Machiels, K., Van den Broeck, K., Van Assche, G., Rutgeerts, P. J., & Raes, J. (2012) · Gastroenterology

Inflammatory Bowel DiseaseGut microbiota and health

Cited by 63

Lactobacillus rhamnosus CNCM I-3690 decreases subjective academic stress in healthy adults: a randomized placebo-controlled trial

Wauters, L., Van Oudenhove, L., Accarie, A., Geboers, K., Geysen, H., Toth, J., Luypaerts, A., Verbeke, K., Smokvina, T., Raes, J., et al. (2022) · Gut Microbes

Probiotics and Fermented FoodsGastrointestinal motility and disorders

Cited by 34

Unstable regulatory T cells, enriched for naïve and Nrp1negcells, are purged after fate challenge

Junius, S., Mavrogiannis, A. V., Lemaitre, P., Gerbaux, M., Staels, F., Malviya, V., Burton, O., Gergelits, V., Singh, K., Tito Tadeo, R. Y., et al. (2021) · Science Immunology

T-cell and B-cell ImmunologyPsoriasis: Treatment and Pathogenesis

Cited by 30

The chemical interactome space between the human host and the genetically defined gut metabotypes

Jacobsen, U. P., Nielsen, H. B., Hildebrand, F., Raes, J., Sicheritz-Ponten, T., Kouskoumvekaki, I., & Panagiotou, G. (2013) · The ISME Journal

Gut microbiota and healthOral microbiology and periodontitis research

Cited by 24

Effect of Five Dietary Emulsifiers on Inflammation, Permeability, and the Gut Microbiome: A Placebo-controlled Randomized Trial

Wellens, J., Vanderstappen, J., Hoekx, S., Vissers, E., Luppens, M., Van Elst, L., Lenfant, M., Raes, J., Derrien, M., Verstockt, B., et al. (2026) · Clinical Gastroenterology and Hepatology

Gut microbiota and healthGastrointestinal motility and disorders

Cited by 17