Ramakrishnan, Charu

Neocortical excitation/inhibition balance in information processing and social dysfunction

Yizhar, O., Fenno, L. E., Prigge, M., Schneider, F., Davidson, T. J., O’Shea, D. J., Sohal, V. S., Goshen, I., Finkelstein, J., Paz, J. T., et al. (2011) · Nature

Neuroscience and Neuropharmacology ResearchNeural dynamics and brain function

Cited by 2,454

Structural and molecular interrogation of intact biological systems

Chung, K., Wallace, J., Kim, S.-Y., Kalyanasundaram, S., Andalman, A. S., Davidson, T. J., Mirzabekov, J. J., Zalocusky, K. A., Mattis, J., Denisin, A. K., et al. (2013) · Nature

Advanced Fluorescence Microscopy TechniquesCell Image Analysis Techniques

Cited by 2,008

Three-dimensional intact-tissue sequencing of single-cell transcriptional states

Wang, X., Allen, W. E., Wright, M. A., Sylwestrak, E. L., Samusik, N., Vesuna, S., Evans, K., Liu, C., Ramakrishnan, C., Liu, J., et al. (2018) · Science

Single-cell and spatial transcriptomicsMolecular Biology Techniques and Applications

Cited by 1,620

Amygdala circuitry mediating reversible and bidirectional control of anxiety

Tye, K. M., Prakash, R., Kim, S.-Y., Fenno, L. E., Grosenick, L., Zarabi, H., Thompson, K. R., Gradinaru, V., Ramakrishnan, C., & Deisseroth, K. (2011) · Nature

Memory and Neural MechanismsNeuroscience and Neuropharmacology Research

Cited by 1,289

Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins

Mattis, J., Tye, K. M., Ferenczi, E. A., Ramakrishnan, C., O'Shea, D. J., Prakash, R., Gunaydin, L. A., Hyun, M., Fenno, L. E., Gradinaru, V., et al. (2012) · Nature Methods

Photoreceptor and optogenetics researchAdvanced Fluorescence Microscopy Techniques

Cited by 780

Recombinase-driver rat lines: tools, techniques, and optogenetic application to dopamine-mediated reinforcement

Witten, I. B., Steinberg, E. E., Lee, S. Y., Davidson, T. J., Zalocusky, K. A., Brodsky, M., Yizhar, O., Cho, S. L., Gong, S., Ramakrishnan, C., et al. (2011) · Neuron

Photoreceptor and optogenetics researchNeurotransmitter Receptor Influence on Behavior

Cited by 680

Cortical layer-specific critical dynamics triggering perception

Marshel, J. H., Kim, Y. S., Machado, T. A., Quirin, S., Benson, B., Kadmon, J., Raja, C., Chibukhchyan, A., Ramakrishnan, C., Inoue, M., et al. (2019) · Science

Visual perception and processing mechanismsNeural dynamics and brain function

Cited by 652

Targeting cells with single vectors using multiple-feature Boolean logic

Fenno, L. E., Mattis, J., Ramakrishnan, C., Hyun, M., Lee, S. Y., He, M., Tucciarone, J., Selimbeyoglu, A., Berndt, A., Grosenick, L., et al. (2014) · Nature Methods

CRISPR and Genetic EngineeringVirus-based gene therapy research

Cited by 557

Prefrontal cortical regulation of brainwide circuit dynamics and reward-related behavior

Ferenczi, E. A., Zalocusky, K. A., Liston, C., Grosenick, L., Warden, M. R., Amatya, D., Katovich, K., Mehta, H., Patenaude, B., Ramakrishnan, C., et al. (2016) · Science

Neurotransmitter Receptor Influence on BehaviorNeural and Behavioral Psychology Studies

Cited by 535

Projections from neocortex mediate top-down control of memory retrieval

Rajasethupathy, P., Sankaran, S., Marshel, J. H., Kim, C. K., Ferenczi, E., Lee, S. Y., Berndt, A., Ramakrishnan, C., Jaffe, A., Lo, M., et al. (2015) · Nature

Memory and Neural MechanismsMemory Processes and Influences

Cited by 509

Cholinergic Interneurons Control Local Circuit Activity and Cocaine Conditioning

Witten, I. B., Lin, S.-C., Brodsky, M., Prakash, R., Diester, I., Anikeeva, P., Gradinaru, V., Ramakrishnan, C., & Deisseroth, K. (2010) · Science

Neurotransmitter Receptor Influence on BehaviorNeuroscience and Neuropharmacology Research

Cited by 467

Serotonin engages an anxiety and fear-promoting circuit in the extended amygdala

Marcinkiewcz, C. A., Mazzone, C. M., D’Agostino, G., Halladay, L. R., Hardaway, J. A., DiBerto, J. F., Navarro, M., Burnham, N., Cristiano, C., Dorrier, C. E., et al. (2016) · Nature

Neurotransmitter Receptor Influence on BehaviorNeuroscience and Neuropharmacology Research

Cited by 456

An optogenetic toolbox designed for primates

Diester, I., Kaufman, M. T., Mogri, M., Pashaie, R., Goo, W., Yizhar, O., Ramakrishnan, C., Deisseroth, K., & Shenoy, K. V. (2011) · Nature Neuroscience

Photoreceptor and optogenetics researchNeuroscience and Neuropharmacology Research

Cited by 443

Mapping projections of molecularly defined dopamine neuron subtypes using intersectional genetic approaches

Poulin, J.-F., Caronia, G., Hofer, C., Cui, Q., Helm, B., Ramakrishnan, C., Chan, C. S., Dombeck, D. A., Deisseroth, K., & Awatramani, R. (2018) · Nature Neuroscience

Neurotransmitter Receptor Influence on BehaviorNeuroscience and Neuropharmacology Research

Cited by 423

Thirst-associated preoptic neurons encode an aversive motivational drive.

Allen, W. E., DeNardo, L. A., Chen, M. Z., Liu, C. D., Loh, K. M., Fenno, L. E., Ramakrishnan, C., Deisseroth, K., & Luo, L. (2017) · Science

Regulation of Appetite and ObesityNeurotransmitter Receptor Influence on Behavior

Cited by 390

A unique population of ventral tegmental area neurons inhibits the lateral habenula to promote reward

Stamatakis, A. M., Jennings, J. H., Ung, R. L., Blair, G. A., Weinberg, R. J., Neve, R. L., Boyce, F., Mattis, J., Ramakrishnan, C., Deisseroth, K., et al. (2013) · Neuron

Neurotransmitter Receptor Influence on BehaviorNeuroscience and Neuropharmacology Research

Cited by 364

Dopaminergic dynamics underlying sex-specific cocaine reward

Calipari, E. S., Juarez, B., Morel, C., Walker, D. M., Cahill, M. E., Ribeiro, E., Roman-Ortiz, C., Ramakrishnan, C., Deisseroth, K., Han, M.-H., et al. (2017) · Nature Communications

Neurotransmitter Receptor Influence on BehaviorNeuroscience and Neuropharmacology Research

Cited by 359

Cardiogenic control of affective behavioural state

Hsueh, B., Chen, R., Jo, Y., Tang, D., Raffiee, M., Kim, Y. S., Inoue, M., Randles, S., Ramakrishnan, C., Patel, S., et al. (2023) · Nature

Heart Rate Variability and Autonomic ControlMemory and Neural Mechanisms

Cited by 335

Modulation of prefrontal cortex excitation/inhibition balance rescues social behavior in CNTNAP2 -deficient mice

Selimbeyoglu, A., Kim, C. K., Inoue, M., Lee, S. Y., Hong, A. S. O., Kauvar, I., Ramakrishnan, C., Fenno, L. E., Davidson, T. J., Wright, M., et al. (2017) · Science Translational Medicine

Genetics and Neurodevelopmental DisordersNeuroscience and Neuropharmacology Research

Cited by 326

Endocannabinoid Modulation of Orbitostriatal Circuits Gates Habit Formation

Gremel, C. M., Chancey, J. H., Atwood, B. K., Luo, G., Neve, R., Ramakrishnan, C., Deisseroth, K., Lovinger, D. M., & Costa, R. M. (2016) · Neuron

Cannabis and Cannabinoid ResearchMemory and Neural Mechanisms

Cited by 251

Long-range GABAergic inputs regulate neural stem cell quiescence and control adult hippocampal neurogenesis

Bao, H., Asrican, B., Li, W., Gu, B., Wen, Z., Lim, S.-A., Haniff, I., Ramakrishnan, C., Deisseroth, K., Philpot, B., et al. (2017) · Cell stem cell

Neurogenesis and neuroplasticity mechanismsNeuroscience and Neuropharmacology Research

Cited by 151

Structural basis for channel conduction in the pump-like channelrhodopsin ChRmine

Kishi, K. E., Kim, Y. S., Fukuda, M., Inoue, M., Kusakizako, T., Wang, P. Y., Ramakrishnan, C., Byrne, E. F. X., Thadhani, E., Paggi, J. M., et al. (2022) · Cell

Photoreceptor and optogenetics researchIon channel regulation and function

Cited by 149

Molecular and Circuit-Dynamical Identification of Top-Down Neural Mechanisms for Restraint of Reward Seeking

Kim, C. K., Ye, L., Jennings, J. H., Pichamoorthy, N., Tang, D. D., Yoo, A.-C. W., Ramakrishnan, C., & Deisseroth, K. (2017) · Cell

Neurotransmitter Receptor Influence on BehaviorNeuroscience and Neuropharmacology Research

Cited by 145

Developmental Dysfunction of VIP Interneurons Impairs Cortical Circuits

Batista-Brito, R., Vinck, M., Ferguson, K. A., Chang, J. T., Laubender, D., Lur, G., Mossner, J. M., Hernandez, V. G., Ramakrishnan, C., Deisseroth, K., et al. (2017) · Neuron

Neuroscience and Neuropharmacology ResearchNeurogenesis and neuroplasticity mechanisms

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