Ellenberg, Jan
Stockholm University · Karolinska Institutet · European Molecular Biology Laboratory · KTH Royal Institute of Technology
14 papers on CoChatORCID 0000-0001-5909-701X
Most cited papers
- Verified
Topologically associating domains and chromatin loops depend on cohesin and are regulated by CTCF, WAPL, and PDS5 proteins
Wutz, G., Várnai, C., Nagasaka, K., Cisneros, D. A., Stocsits, R. R., Tang, W., Schoenfelder, S., Jessberger, G., Muhar, M., Hossain, M. J., et al. (2017) · The EMBO Journal
Genomics and Chromatin DynamicsChromatin Remodeling and Cancer
Cited by 864
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The quantitative proteome of a human cell line
Beck, M., Schmidt, A., Malmstroem, J., Claassen, M., Ori, A., Szymborska, A., Herzog, F., Rinner, O., Ellenberg, J., & Aebersold, R. (2011) · Molecular Systems Biology
Advanced Proteomics Techniques and ApplicationsBioinformatics and Genomic Networks
Cited by 816
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A proposal for validation of antibodies
Uhlen, M., Bandrowski, A., Carr, S., Edwards, A., Ellenberg, J., Lundberg, E., Rimm, D. L., Rodriguez, H., Hiltke, T., Snyder, M., et al. (2016) · Nature Methods
Monoclonal and Polyclonal Antibodies ResearchMolecular Biology Techniques and Applications
Cited by 626
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Wapl is an essential regulator of chromatin structure and chromosome segregation
Tedeschi, A., Wutz, G., Huet, S., Jaritz, M., Wuensche, A., Schirghuber, E., Davidson, I. F., Tang, W., Cisneros, D. A., Bhaskara, V., et al. (2013) · Nature
Genomics and Chromatin DynamicsNuclear Structure and Function
Cited by 359
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Retrograde transport of Golgi-localized proteins to the ER
Cole, N. B., Ellenberg, J., Song, J., DiEuliis, D., & Lippincott-Schwartz, J. (1998) · The Journal of Cell Biology
Cellular transport and secretionEndoplasmic Reticulum Stress and Disease
Cited by 226
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Genome-wide RNAi screening identifies human proteins with a regulatory function in the early secretory pathway
Simpson, J. C., Joggerst, B., Laketa, V., Verissimo, F., Cetin, C., Erfle, H., Bexiga, M. G., Singan, V. R., Hériché, J.-K., Neumann, B., et al. (2012) · Nature Cell Biology
Cellular transport and secretionRNA Research and Splicing
Cited by 186
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Generation and validation of homozygous fluorescent knock-in cells using CRISPR-Cas9 genome editing
Koch, B., Nijmeijer, B., Kueblbeck, M., Cai, Y., Walther, N., & Ellenberg, J. (2018) · Nature Protocols
CRISPR and Genetic EngineeringAnimal Genetics and Reproduction
Cited by 134
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Experimental and computational framework for a dynamic protein atlas of human cell division
Cai, Y., Hossain, M. J., Hériché, J.-K., Politi, A. Z., Walther, N., Koch, B., Wachsmuth, M., Nijmeijer, B., Kueblbeck, M., Martinic-Kavur, M., et al. (2018) · Nature
Microtubule and mitosis dynamicsCell Image Analysis Techniques
Cited by 121
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Postmitotic nuclear pore assembly proceeds by radial dilation of small membrane openings
Otsuka, S., Steyer, A. M., Schorb, M., Hériché, J.-K., Hossain, M. J., Sethi, S., Kueblbeck, M., Schwab, Y., Beck, M., & Ellenberg, J. (2018) · Nature Structural & Molecular Biology
Nuclear Structure and FunctionMicrotubule and mitosis dynamics
Cited by 90
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Quantitative mapping of fluorescently tagged cellular proteins using FCS-calibrated four-dimensional imaging
Politi, A. Z., Cai, Y., Walther, N., Hossain, M. J., Koch, B., Wachsmuth, M., & Ellenberg, J. (2018) · Nature Protocols
Advanced Fluorescence Microscopy TechniquesCell Image Analysis Techniques
Cited by 81
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Quantitative mapping of fluorescently tagged cellular proteins using FCS-calibrated four dimensional imaging
Politi, A. Z., Cai, Y., Walther, N., Hossain, M. J., Koch, B., Wachsmuth, M., & Ellenberg, J. (2017) · Nature Protocols
Advanced Fluorescence Microscopy TechniquesCell Image Analysis Techniques
Cited by 81
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Gain of CTCF-Anchored Chromatin Loops Marks the Exit from Naive Pluripotency
Pękowska, A., Klaus, B., Xiang, W., Severino, J., Daigle, N., Klein, F. A., Oleś, M., Casellas, R., Ellenberg, J., Steinmetz, L. M., et al. (2018) · Cell Systems
Genomics and Chromatin DynamicsPluripotent Stem Cells Research
Cited by 74
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Nanoscale 3D DNA tracing in non-denatured cells resolves the Cohesin-dependent loop architecture of the genome in situ
Beckwith, K. S., Ødegård-Fougner, Ø., Morero, N. R., Barton, C., Schueder, F., Tang, W., Alexander, S., Peters, J. M., Jungmann, R., Birney, E., et al. (2025) · Nature Communications
Genomics and Chromatin DynamicsNuclear Structure and Function
Cited by 13
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Integrative spatiotemporal modeling of biomolecular processes: Application to the assembly of the nuclear pore complex
Latham, A. P., Zhang, W., Tempkin, J. O. B., Otsuka, S., Ellenberg, J., & Sali, A. (2025) · Proceedings of the National Academy of Sciences
Nuclear Structure and FunctionProtein Structure and Dynamics
Cited by 8
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