Paulsen, Ian T.

Genome sequence of the human malaria parasite Plasmodium falciparum

Gardner, M. J., Hall, N., Fung, E., White, O., Berriman, M., Hyman, R. W., Carlton, J. M., Pain, A., Nelson, K. E., Bowman, S., et al. (2002) · Nature

Malaria Research and ControlBird parasitology and diseases

Cited by 4,407

Environmental genome shotgun sequencing of the sargasso sea

Venter, J. C., Remington, K., Heidelberg, J. F., Halpern, A. L., Rusch, D., Eisen, J. A., Wu, D., Paulsen, I., Nelson, K. E., Nelson, W., et al. (2004) · Science

Microbial Community Ecology and PhysiologyGenomics and Phylogenetic Studies

Cited by 4,376

Major Facilitator Superfamily

Pao, S. S., Paulsen, I. T., & Saier, M. H. (1998) · Microbiology and Molecular Biology Reviews

Drug Transport and Resistance MechanismsBacterial Genetics and Biotechnology

Cited by 2,297

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

Nierman, W. C., Pain, A., Anderson, M. J., Wortman, J. R., Kim, H. S., Arroyo, J., Berriman, M., Abe, K., Archer, D. B., Bermejo, C., et al. (2005) · Nature

Fungal and yeast genetics researchAntifungal resistance and susceptibility

Cited by 1,391

Phylogenomics of the Reproductive Parasite Wolbachia pipientis wMel: A Streamlined Genome Overrun by Mobile Genetic Elements

Wu, M., Sun, L. V., Vamathevan, J., Riegler, M., Deboy, R., Brownlie, J. C., McGraw, E. A., Martin, W., Esser, C., Ahmadinejad, N., et al. (2004) · PLoS Biology

Insect symbiosis and bacterial influencesGenomics and Phylogenetic Studies

Cited by 851

Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology

Karp, P. D., Paley, S. M., Krummenacker, M., Latendresse, M., Dale, J. M., Lee, T. J., Kaipa, P., Gilham, F., Spaulding, A., Popescu, L., et al. (2010) · Briefings in Bioinformatics

Bioinformatics and Genomic NetworksMicrobial Metabolic Engineering and Bioproduction

Cited by 694

The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation

Palenik, B., Grimwood, J., Aerts, A., Rouzé, P., Salamov, A., Putnam, N., Dupont, C., Jorgensen, R., Derelle, E., Rombauts, S., et al. (2007) · Proceedings of the National Academy of Sciences

Protist diversity and phylogenyChromosomal and Genetic Variations

Cited by 625

EcoCyc: A comprehensive view of Escherichia coli biology

Keseler, I. M., Bonavides-Martinez, C., Collado-Vides, J., Gama-Castro, S., Gunsalus, R. P., Johnson, D. A., Krummenacker, M., Nolan, L. M., Paley, S., Paulsen, I. T., et al. (2009) · Nucleic Acids Research

Bioinformatics and Genomic NetworksMicrobial Metabolic Engineering and Bioproduction

Cited by 373

Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics

Gobler, C. J., Berry, D. L., Dyhrman, S. T., Wilhelm, S. W., Salamov, A., Lobanov, A. V., Zhang, Y., Collier, J. L., Wurch, L. L., Kustka, A. B., et al. (2011) · Proceedings of the National Academy of Sciences

Marine and coastal ecosystemsAquatic Ecosystems and Phytoplankton Dynamics

Cited by 285

The ergosterol biosynthesis pathway, transporter genes, and azole resistance in Aspergillus fumigatus

Da Silva Ferreira, M. E., Colombo, A. L., Paulsen, I., Ren, Q., Wortman, J., Huang, J., Goldman, M. H. S., & Goldman, G. H. (2005) · Medical Mycology

Antifungal resistance and susceptibilityFungal and yeast genetics research

Cited by 158

Fiber Supplements Derived From Sugarcane Stem, Wheat Dextrin and Psyllium Husk Have Different In Vitro Effects on the Human Gut Microbiota

Gamage, H. K. A. H., Tetu, S. G., Chong, R. W. W., Bucio-Noble, D., Rosewarne, C. P., Kautto, L., Ball, M. S., Molloy, M. P., Packer, N. H., & Paulsen, I. T. (2018) · Frontiers in Microbiology

Gut microbiota and healthMicrobial Metabolites in Food Biotechnology

Cited by 49

Genetically and Phenotypically Distinct Pseudomonas aeruginosa Cystic Fibrosis Isolates Share a Core Proteomic Signature

Penesyan, A., Kumar, S. S., Kamath, K., Shathili, A. M., Venkatakrishnan, V., Krisp, C., Packer, N. H., Molloy, M. P., & Paulsen, I. T. (2015) · PLOS ONE

Bacterial biofilms and quorum sensingCystic Fibrosis Research Advances

Cited by 40

Genetic identification of a high-affinity Ni transporter and the transcriptional response to Ni deprivation in Synechococcus sp. strain WH8102

Dupont, C. L., Johnson, D. A., Phillippy, K., Paulsen, I. T., Brahamsha, B., & Palenik, B. (2012) · Applied and Environmental Microbiology

Metalloenzymes and iron-sulfur proteinsBacterial Genetics and Biotechnology

Cited by 28

Third generation cephalosporins and piperacillin/tazobactam have distinct impacts on the microbiota of critically ill patients

Gamage, H. K. A. H., Venturini, C., Tetu, S. G., Kabir, M., Nayyar, V., Ginn, A. N., Roychoudhry, B., Thomas, L., Brown, M., Holmes, A., et al. (2021) · Scientific Reports

Gut microbiota and healthAntibiotic Use and Resistance

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