High‐field MRI of single histological slices using an inductively coupled, self‐resonant microcoil: application to ex vivo samples of patients with Alzheimer's disease
Abstract
A simple inductively coupled microcoil has been designed to image tissue samples placed on a microscope slide, samples which can subsequently be stained histologically. As the exact same tissue is used for MRI and histology, the two data sets can be compared without the need for complicated image registration techniques. The design can be integrated into any MRI system using existing commercial hardware. Compared with a commercial 25-mm-diameter birdcage, the signal-to-noise ratio was increased by a factor of 3.8, corresponding to an approximate 15-fold reduction in the data acquisition time. An example is shown of ex vivo samples from patients with Alzheimer's disease, in which the coregistration of highly sensitive iron staining and amyloid-β deposits is confirmed.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
MRI scans of post-mortem human brains and a mouse model of Alzheimer's disease show decreases in hippocampal T2* MRI, which is sensitive to the magnetic properties of iron or its spatial variance, attributed in part to iron in Aβ plaques.
“MRI scans of post-mortem human brains and a mouse model of Alzheimer’s disease show decreases in hippocampal T2* MRI, which is sensitive to the magnetic properties of iron86,87 or its spatial variance, attributed in part to iron in Aβ plaques.88–90”
From The role of iron in brain ageing and neurodegenerative disorders (2014) · cites this paper as [89]
Cites
Iron accumulation in Alzheimer disease is a source of redox-generated free radicals
Smith, M. A., Harris, P. L. R., Sayre, L. M., & Perry, G. L. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.18.9866 · Cited by 1,357 · see citing works
High-field MRI of brain cortical substructure based on signal phase
Duyn, J. H., van Gelderen, P., Li, T., de Zwart, J. A., Koretsky, A. P., & Fukunaga, M. (2007) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0610821104 · Cited by 641 · see citing works
Imaging of the active B1 field in vivo
Stollberger, R., & Wach, P. (1996) · Magnetic Resonance in Medicine · doi:10.1002/mrm.1910350217 · Cited by 357 · see citing works
Aldehyde fixative solutions alter the water relaxation and diffusion properties of nervous tissue
Shepherd, T. M., Thelwall, P. E., Stanisz, G. J., & Blackband, S. J. (2009) · Magnetic Resonance in Medicine · doi:10.1002/mrm.21977 · Cited by 305 · see citing works
Iron deposits in multiple sclerosis and Alzheimer's disease brains
LeVine, S. M. (1997) · Brain Research · doi:10.1016/s0006-8993(97)00470-8 · Cited by 258 · see citing works
Detection of neuritic plaques in Alzheimer’s disease by magnetic resonance microscopy
Benveniste, H., Einstein, G., Kim, K. R., Hulette, C., & Johnson, G. A. (1999) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.96.24.14079 · Cited by 238 · see citing works
Postmortem MR imaging of formalin-fixed human brain
Pfefferbaum, A., Sullivan, E. V., Elfar Adalsteinsson, A., Garrick, T. M., & Harper, C. G. (2004) · NeuroImage · doi:10.1016/j.neuroimage.2003.11.024 · Cited by 199 · see citing works
Meadowcroft, M. D., Connor, J. R., Smith, M. B., & Yang, Q. X. (2009) · Journal of Magnetic Resonance Imaging · doi:10.1002/jmri.21731 · Cited by 176 · see citing works
Oligodendrocytes and myelin sheaths in normal, quaking and shiverer brains are enriched in iron
LeVine, S. M. (1991) · Journal of Neuroscience Research · doi:10.1002/jnr.490290317 · Cited by 66 · see citing works
Cerebral Amyloidosis: Postmortem Detection with Human 7.0-T MR Imaging System
van Rooden, S., Maat–Schieman, M. L. C., Nabuurs, R. J. A., van der Weerd, L., van Duijn, S., van Duinen, S. G., Natté, R., van Buchem, M. A., & van der Grond, J. (2009) · Radiology · doi:10.1148/radiol.2533090490 · Cited by 49 · see citing works
Self-citationA microscope slide probe for high resolution imaging at 11.7 tesla
Glover, P. M., Bowtell, R. W., Brown, G. D., & Mansfield, P. R. (1994) · Magnetic Resonance in Medicine · doi:10.1002/mrm.1910310411 · Cited by 43 · see citing works
Breen, M. S., Lazebnik, R. S., & Wilson, D. L. (2005) · Annals of Biomedical Engineering · doi:10.1007/s10439-005-5778-8 · Cited by 41 · see citing works
Inductively-overcoupled coil design for high resolution magnetic resonance imaging
Bilgen, M. (2006) · BioMedical Engineering OnLine · doi:10.1186/1475-925x-5-3 · Cited by 35 · see citing works
Direct magnetic resonance imaging of histological tissue samples at 3.0T
Meadowcroft, M. D., Zhang, S., Liu, W., Park, B. S., Connor, J. R., Collins, C. M., Smith, M. B. H., & Yang, Q. (2007) · Magnetic Resonance in Medicine · doi:10.1002/mrm.21213 · Cited by 34 · see citing works
Utz, M., & Monazami, R. (2009) · Journal of Magnetic Resonance · doi:10.1016/j.jmr.2009.01.028 · Cited by 31 · see citing works
A Probe for Specimen Magnetic Resonance Microscopy
Banson, M. L., Cofer, G. P., BLACK, R., & Johnson, G. A. (1992) · Investigative Radiology · doi:10.1097/00004424-199202000-00013 · Cited by 28 · see citing works
Iron Deposition after Transient Forebrain Ischemia in Rat Brain
Danielisová, V., Gottlieb, M., & Bürda, J. (2002) · Neurochemical Research · doi:10.1023/a:1014888605787 · Cited by 22 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
The role of iron in brain ageing and neurodegenerative disorders
Ward, R. J., Zucca, F. A., Duyn, J. H., Crichton, R. R., & Zecca, L. (2014) · The Lancet Neurology · doi:10.1016/s1474-4422(14)70117-6 · Cited by 1,819 · see citing works
Iron loading is a prominent feature of activated microglia in Alzheimer’s disease patients
Kenkhuis, B., Somarakis, A., de Haan, L., Dzyubachyk, O., IJsselsteijn, M. E., de Miranda, N. F. C. C., Lelieveldt, B. P. F., Dijkstra, J., van Roon-Mom, W. M. C., Höllt, T., et al. (2021) · Acta Neuropathologica Communications · doi:10.1186/s40478-021-01126-5 · Cited by 184 · see citing works
Cortical iron reflects severity of Alzheimer's disease
van Duijn, S., Bulk, M., van Duinen, S. G., Nabuurs, R. J. A., van Buchem, M. A., van der Weerd, L., & Natté, R. (2017) · Journal of Alzheimer s Disease · doi:10.3233/jad-161143 · Cited by 172 · see citing works
Self-citationBulk, M., Abdelmoula, W. M., Nabuurs, R. J. A., van der Graaf, L. M., Mulders, C. W. H., Mulder, A. A., Jost, C. R., Koster, A. J., van Buchem, M. A., Natté, R., et al. (2017) · Neurobiology of Aging · doi:10.1016/j.neurobiolaging.2017.10.017 · Cited by 115 · see citing works
Self-citationA review of β-amyloid neuroimaging in Alzheimer's disease
Adlard, P. A., Tran, B. A., Finkelstein, D. I., Desmond, P. M., Johnston, L. A., Bush, A. I., & Egan, G. F. (2014) · Frontiers in Neuroscience · doi:10.3389/fnins.2014.00327 · Cited by 93 · see citing works
Antharam, V., Collingwood, J. F., Bullivant, J.-P., Davidson, M. R., Chandra, S., Mikhaylova, A., Finnegan, M. E., Batich, C., Forder, J. R., & Dobson, J. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2011.08.019 · Cited by 82 · see citing works
Radiofrequency microcoils for magnetic resonance imaging and spectroscopy
WEBB, A. G. (2012) · Journal of Magnetic Resonance · doi:10.1016/j.jmr.2012.10.004 · Cited by 78 · see citing works
Self-citationPostmortem T 2 * - Weighted MRI Imaging of Cortical Iron Reflects Severity of Alzheimer’s Disease
Bulk, M., Kenkhuis, B., van der Graaf, L. M., Goeman, J. J., Natté, R., & van der Weerd, L. (2018) · Journal of Alzheimer s Disease · doi:10.3233/jad-180317 · Cited by 64 · see citing works
Self-citationvan Duijn, S., Nabuurs, R. J. A., van Duinen, S. G., & Natté, R. (2013) · Journal of Histochemistry & Cytochemistry · doi:10.1369/0022155413501325 · Cited by 61 · see citing works
Self-citationLocally Enhanced Image Quality with Tunable Hybrid Metasurfaces
Shchelokova, A. V., Slobozhanyuk, A. P., Мельчакова, И. В., Glybovski, S., WEBB, A. G., Kivshar, Y. S., & Belov, P. A. (2018) · Physical Review Applied · doi:10.1103/physrevapplied.9.014020 · Cited by 59 · see citing works
Self-citationJonkman, L. E., Graaf, Y. G.-D., Bulk, M., Kaai, E., Pouwels, P. J. W., Barkhof, F., Rozemüller, A. J. M., van der Weerd, L., Geurts, J. J. G., & van de Berg, W. D. J. (2019) · NeuroImage Clinical · doi:10.1016/j.nicl.2019.101698 · Cited by 44 · see citing works
Bulk, M., van der Weerd, L., Breimer, W., Лебедев, Н. А., WEBB, A. G., Goeman, J. J., Ward, R. J., Huber, M., Oosterkamp, T. H., & Bossoni, L. (2018) · Scientific Reports · doi:10.1038/s41598-018-25021-7 · Cited by 49 · see citing works
Self-citationMagnetic Lenz lenses improve the limit-of-detection in nuclear magnetic resonance
Spengler, N., While, P. T., Meissner, M. V., Wallrabe, U., & Korvink, J. G. (2017) · PLoS ONE · doi:10.1371/journal.pone.0182779 · Cited by 40 · see citing works
A novel approach to quantify different iron forms in ex-vivo human brain tissue
Kumar, P., Bulk, M., WEBB, A. G., van der Weerd, L., Oosterkamp, T. H., Huber, M., & Bossoni, L. (2016) · Scientific Reports · doi:10.1038/srep38916 · Cited by 40 · see citing works
Self-citationFritz, F. J., Sengupta, S., Harms, R., Tse, D. H. Y., Poser, B. A., & Roebroeck, A. F. (2019) · NeuroImage · doi:10.1016/j.neuroimage.2019.116087 · Cited by 40 · see citing works
Magnetic resonance microscopy of human and porcine neurons and cellular processes
Flint, J. J., Hansen, B., Portnoy, S., Lee, C.-H., King, M. A., Fey, M., Vincent, F., Stanisz, G. J., Vestergaard‐Poulsen, P., & Blackband, S. J. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2012.01.050 · Cited by 37 · see citing works
Ficiarà, E., Munir, Z., Boschi, S., Caligiuri, M. E., & Guiot, C. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22094479 · Cited by 39 · see citing works
MR approaches in neurodegenerative disorders
Blamire, A. M. (2018) · Progress in Nuclear Magnetic Resonance Spectroscopy · doi:10.1016/j.pnmrs.2018.11.001 · Cited by 37 · see citing works
High resolution anatomical and quantitative MRI of the entire human occipital lobe ex vivo at 9.4 T
Sengupta, S., Fritz, F. J., Harms, R., Hildebrand, S., Tse, D. H. Y., Poser, B. A., Goebel, R., & Roebroeck, A. F. (2017) · NeuroImage · doi:10.1016/j.neuroimage.2017.03.039 · Cited by 36 · see citing works
Kenkhuis, B., Jonkman, L. E., Bulk, M., Buijs, M., Boon, B. D. C., Bouwman, F. H., Geurts, J. J. G., van de Berg, W. D. J., & van der Weerd, L. (2019) · NeuroImage Clinical · doi:10.1016/j.nicl.2019.101665 · Cited by 35 · see citing works
Dudeffant, C., Vandesquille, M., Herbert, K., Garin, C. M., Alves, S., Blanchard, V., Comoy, E. E., Petit, F., & Dhenain, M. (2017) · Scientific Reports · doi:10.1038/s41598-017-05285-1 · Cited by 34 · see citing works
Quantitative Analysis of Synthetic Magnetic Resonance Imaging in Alzheimer’s Disease
Lou, B., Jiang, Y., Li, C., Wu, P., Li, S., Qin, B., Chen, H., Wang, R., Wu, B., & Chen, M. (2021) · Frontiers in Aging Neuroscience · doi:10.3389/fnagi.2021.638731 · Cited by 29 · see citing works
Post-Mortem MRI and Histopathology in Neurologic Disease: A Translational Approach
Jonkman, L. E., Kenkhuis, B., Geurts, J. J. G., & van de Berg, W. D. J. (2019) · Neuroscience Bulletin · doi:10.1007/s12264-019-00342-3 · Cited by 27 · see citing works
Medial temporal cortices in ex vivo magnetic resonance imaging
Augustinack, J. C., van der Kouwe, A. J. W., & Fischl, B. R. (2013) · The Journal of Comparative Neurology · doi:10.1002/cne.23432 · Cited by 25 · see citing works
Nabuurs, R. J. A., Natté, R., de Ronde, F. M., Hegeman-Kleinn, I. M., Dijkstra, J., van Duinen, S. G., WEBB, A. G., Rozemüller, A. J. M., van Buchem, M. A., & van der Weerd, L. (2013) · Journal of Alzheimer s Disease · doi:10.3233/jad-122215 · Cited by 19 · see citing works
Self-citationCurrent Perspective of Hydrogen Sulfide as a Novel Gaseous Modulator of Oxidative Stress in Glaucoma
Feng, Y., Prokosch, V., & Liu, H. (2021) · Antioxidants · doi:10.3390/antiox10050671 · Cited by 16 · see citing works
Siloxane Nanoprobes for Labeling and Dual Modality Functional Imaging of Neural Stem Cells
Addington, C. P., Cusick, A. B., Shankar, R. V., Agarwal, S., Stabenfeldt, S. E., & Kodibagkar, V. D. (2015) · Annals of Biomedical Engineering · doi:10.1007/s10439-015-1514-1 · Cited by 13 · see citing works
Flint, J. J., Menon, K., Hansen, B., Forder, J. R., & Blackband, S. J. (2015) · Scientific Reports · doi:10.1038/srep18095 · Cited by 9 · see citing works
Baxan, N., Kahlert, U. D., Maciaczyk, J., Nikkhah, G., Hennig, J., & von Elverfeldt, D. (2011) · Magnetic Resonance in Medicine · doi:10.1002/mrm.23208 · Cited by 8 · see citing works
Postmortem imaging and neuropathologic correlations
Augustinack, J. C., & van der Kouwe, A. J. W. (2016) · Handbook of clinical neurology · doi:10.1016/b978-0-444-53486-6.00069-7 · Cited by 7 · see citing works
A parallel imaging approach to wide‐field MR microscopy
McDougall, M. P., & Wright, S. M. (2011) · Magnetic Resonance in Medicine · doi:10.1002/mrm.23258 · Cited by 6 · see citing works
Liu, L., Tao-Cheng, J.-H., Rallapalli, H., Dodd, S. J., Bouraoud, N., & Koretsky, A. P. (2024) · Imaging Neuroscience · doi:10.1162/imag_a_00299 · Cited by 1 · see citing works
Iron Homeostasis and Neurodegeneration
Crichton, R. R. (2016) · doi:10.1002/9781118925645.ch15 · Cited by 1 · see citing works
Song, B.-P., Kim, H.-S., Yoon, S., Hernandez, D., Kim, K., & Lee, S. (2022) · IEEE Access · doi:10.1109/access.2022.3189992
Assessing Iron Deposition in the Brains of 5xFAD Mice by Perls'/DAB Staining
Sang, S., Tian, C., Ding, J., Pang, S., & Liu, C. (2025) · Journal of Visualized Experiments · doi:10.3791/67501
Kato, S., Hagiwara, A., Fujita, S., Uchida, W., Kamagata, K., Furuta, T., Akai, H., Abe, O., Motoi, Y., Hattori, N., et al. (2026) · Neuroradiology · doi:10.1007/s00234-026-03980-3
- Authors
- Nabuurs, R. J. A., Hegeman, I., Natté, R., van Duinen, S. G., van Buchem, M. A., van der Weerd, L., & Webb, A. G.
- Affiliations
- Leiden University Medical Center (NL)
- Corresponding author
- Webb, Andrew G.
- Venue
- NMR in Biomedicine
- Publisher
- Wiley
- Published
- 2010-10-19
- Volume
- 24
- Issue
- 4
- Pages
- 351-357
- ISSN
- 0952-3480 (ISSN-L)
- 1099-1492
- OpenAlex
- W1969878863
- Cited by
- 39
- References
- 17
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 1 · 2022: 1 · 2021: 4 · 2019: 4 · 2018: 5 · 2017: 6 · 2016: 3 · 2015: 2 · 2014: 2 · 2013: 4 · 2012: 2
- FWCI
- 2.34
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- NMR in Biomedicine (publishedVersion)
- PubMed (publishedVersion)
- Data Archiving and Networked Services (DANS) (submittedVersion)
- Leiden Repository (Leiden University) (submittedVersion)
- Topics
- Health Sciences › Medicine › Radiology, Nuclear Medicine and Imaging › Advanced MRI Techniques and Applications
- Physical Sciences › Chemistry › Spectroscopy › Advanced NMR Techniques and Applications
- Physical Sciences › Physics and Astronomy › Atomic and Molecular Physics, and Optics › Atomic and Subatomic Physics Research
- Keywords
- microcoils, self-resonant coils, high-field MRI, ex vivo brain tissue, Alzheimer's disease, iron staining, amyloid-beta deposition, co-registration, signal-to-noise ratio, birdcage coil
- MeSH terms
- Alzheimer Disease, Brain, Calibration, Humans, Magnetic Resonance Imaging, Radio Waves, Echo-Planar Imaging
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review