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Structure and evolution of the apolipoprotein multigene family

Luo, Chi-Cheng, Li, Wen-Hsiung, Moore, Marsha N., Chan, Lawrence·1986·Journal of Molecular Biology
DOI 10.1016/0022-2836(86)90436-5
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Abstract

We present the complementary DNA and deduced amino acid sequence of rat apolipoprotein A-II (apoA-II), and the results of a detailed statistical analysis of the nucleotide and amino acid sequences of all the apolipoprotein gene sequences published to date: namely, those of human and rat apoA-I, apoA-II and apoE, rat apoA-IV, and human apoC-I, C-II and C-III. Our results indicate that the apolipoprotein genes have very similar genomic structures, each having a total of three introns at the same locations. Using the exon/intron junctions as reference points, we have obtained an alignment of the coding regions of all the genes studied. It appears that the mature peptide regions of these genes are almost completely made up of tandem repeats of 11 codons. The part of mature peptide region encoded by exon 3 contains a common block of 33 codons, whereas the part encoded by exon 4 contains a much more variable number of internal repeats of 11 codons. These genes have apparently evolved from a primordial gene through multiple partial (internal) and complete gene duplications. On the basis of the degree of homology of the various sequences, and the pattern of the internal repeats in these genes, we propose an evolutionary tree for the apolipoprotein genes and give rough estimates of the divergence times between these genes. Our results show that apoA-II has evolved extremely rapidly and that apoA-I and apoE also have evolved at high rates but some regions are better conserved than the…

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Metadata

Authors
Luo, C.-C., Li, W.-H., Moore, M. N., & Chan, L.
Venue
Journal of Molecular Biology
Publisher
Elsevier BV
Published
1986-02
Volume
187
Issue
3
Pages
325-340
ISSN
0022-2836
DOI
10.1016/0022-2836(86)90436-5
Cited by
173
References
3
Language
en
Licence
Funders
National Science Foundation

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