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Next-Generation Sequencing: A Review of Technologies and Tools for Wound Microbiome Research

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The Gut Microbial Community of Midas Cichlid Fish in Repeatedly Evolved Limnetic-Benthic Species Pairs

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The Gut Microbiota of Marine Fish

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Gut Microbiota and Energy Homeostasis in Fish

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The sponge holobiont in a changing ocean: from microbes to ecosystems

Pita, L., Rix, L. N., Slaby, B. M., Franke, A., & Hentschel, U. (2018) · Microbiome · doi:10.1186/s40168-018-0428-1 · Cited by 580 · see citing works

Microbiome evolution along divergent branches of the vertebrate tree of life: what is known and unknown

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Gut microbiota metagenomics in aquaculture: factors influencing gut microbiome and its physiological role in fish

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Potential of microalgae as a sustainable feed ingredient for aquaculture

Nagappan, S., Das, P., AbdulQuadir, M., Thaher, M., Khan, S., Mahata, C., Al-Jabri, H., Vatland, A. K., & Kumar, G. (2021) · Journal of Biotechnology · doi:10.1016/j.jbiotec.2021.09.003 · Cited by 364 · see citing works

Host habitat is the major determinant of the gut microbiome of fish

Kim, P. S., Shin, N.-R., Lee, J.-B., Kim, M. S., Whon, T. W., Hyun, D., Yun, J., Jung, M., Kim, J. Y., & Bae, J. (2021) · Microbiome · doi:10.1186/s40168-021-01113-x · Cited by 347 · see citing works

Responses of Coral-Associated Bacterial Communities to Local and Global Stressors

McDevitt‐Irwin, J. M., Baum, J. K., Garren, M., & Thurber, R. L. V. (2017) · Frontiers in Marine Science · doi:10.3389/fmars.2017.00262 · Cited by 329 · see citing works

The microbial safety of fish and fish products: Recent advances in understanding its significance, contamination sources, and control strategies

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Exploring fish microbial communities to mitigate emerging diseases in aquaculture

de Bruijn, I., Liu, Y., Wiegertjes, G. F., & Raaijmakers, J. M. (2017) · FEMS Microbiology Ecology · doi:10.1093/femsec/fix161 · Cited by 269 · see citing works

A microbial sea of possibilities: current knowledge and prospects for an improved understanding of the fish microbiome

Legrand, T. P. R. A., Wynne, J. W., Weyrich, L. S., & Oxley, A. P. A. (2019) · Reviews in Aquaculture · doi:10.1111/raq.12375 · Cited by 269 · see citing works

Endozoicomonas genomes reveal functional adaptation and plasticity in bacterial strains symbiotically associated with diverse marine hosts

Neave, M. J., Michell, C., Apprill, A. M., & Voolstra, C. R. (2017) · Scientific Reports · doi:10.1038/srep40579 · Cited by 263 · see citing works

Environment shapes the fecal microbiome of invasive carp species

Eichmiller, J. J., Hamilton, M. J., Staley, C. M., Sadowsky, M. J., & Sorensen, P. W. (2016) · Microbiome · doi:10.1186/s40168-016-0190-1 · Cited by 255 · see citing works

Can diets containing insects promote animal health?

Gasco, L., Finke, M. D., & van Huis, A. (2018) · Journal of Insects as Food and Feed · doi:10.3920/jiff2018.x001 · Cited by 253 · see citing works

An overview of microalgae biomass as a sustainable aquaculture feed ingredient: food security and circular economy

Ahmad, A., Hassan, S. W., & BANAT, F. A. (2022) · Bioengineered · doi:10.1080/21655979.2022.2061148 · Cited by 257 · see citing works

Applications of microalga <i>Chlorella vulgaris</i> in aquaculture

Ahmad, M. T., Shariff, M., Md. Yusoff, F., Goh, Y. M., & Banerjee, S. (2020) · Reviews in Aquaculture · doi:10.1111/raq.12320 · Cited by 244 · see citing works

Under control: how a dietary additive can restore the gut microbiome and proteomic profile, and improve disease resilience in a marine teleostean fish fed vegetable diets

Piazzon, M. C., Calduch-Giner, J. À., Fouz, B., Estensoro, I., Simó‐Mirabet, P., Puyalto, M., Karalazos, V., Palenzuela, O. R., Sitjà‐Bobadilla, A., & Pérez‐Sánchez, J. (2017) · Microbiome · doi:10.1186/s40168-017-0390-3 · Cited by 238 · see citing works

Rainbow trout (Oncorhynchus mykiss) gut microbiota is modulated by insect meal from Hermetia illucens prepupae in the diet

Terova, G., Rimoldi, S., Ascione, C., Gini, E., Ceccotti, C., & Gasco, L. (2019) · Reviews in Fish Biology and Fisheries · doi:10.1007/s11160-019-09558-y · Cited by 227 · see citing works

Alternative Proteins for Fish Diets: Implications beyond Growth

Aragão, C., Gonçalves, A. T., Costas, B., Azeredo, R., Xavier, M. J., & Engrola, S. A. D. (2022) · Animals · doi:10.3390/ani12091211 · Cited by 225 · see citing works

Dietary effects of soybean products on gut microbiota and immunity of aquatic animals: A review

Zhou, Z., Ringø, E., Olsen, R. E., & Song, S. K. (2017) · Aquaculture Nutrition · doi:10.1111/anu.12532 · Cited by 216 · see citing works

Characterisation of the intestinal microbial communities of rainbow trout (Oncorhynchus mykiss) fed with Hermetia illucens (black soldier fly) partially defatted larva meal as partial dietary protein source

Bruni, L., Pastorelli, R., Viti, C., Gasco, L., & Parisi, G. (2018) · Aquaculture · doi:10.1016/j.aquaculture.2018.01.006 · Cited by 211 · see citing works

The Resistome of Farmed Fish Feces Contributes to the Enrichment of Antibiotic Resistance Genes in Sediments below Baltic Sea Fish Farms

Muziasari, W. I., Pitkänen, L. K., Sørum, H. R., Stedtfeld, R. D., Tiedje, J. M., & Virta, M. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2016.02137 · Cited by 190 · see citing works

Next generation sequencing for gut microbiome characterization in rainbow trout (Oncorhynchus mykiss) fed animal by-product meals as an alternative to fishmeal protein sources

Rimoldi, S., Terova, G., Ascione, C., Giannico, R., & Brambilla, F. (2018) · PLoS ONE · doi:10.1371/journal.pone.0193652 · Cited by 182 · see citing works

The Effects of Dietary Insect Meal from Hermetia illucens Prepupae on Autochthonous Gut Microbiota of Rainbow Trout (Oncorhynchus mykiss)

Rimoldi, S., Gini, E., Iannini, F., Gasco, L., & Terova, G. (2019) · Animals · doi:10.3390/ani9040143 · Cited by 183 · see citing works

Healthy microbiome: a key to successful and sustainable shrimp aquaculture

Rajeev, R., Adithya, K. K., Kiran, G. S., & Selvin, J. (2020) · Reviews in Aquaculture · doi:10.1111/raq.12471 · Cited by 175 · see citing works

Diversity of gut microbiomes in marine fishes is shaped by host‐related factors

Huang, Q., Sham, R. C.-T., Deng, Y., Mao, Y., Wang, C., Zhang, T., & Leung, K. (2020) · Molecular Ecology · doi:10.1111/mec.15699 · Cited by 176 · see citing works

Seawater transfer alters the intestinal microbiota profiles of Atlantic salmon (Salmo salar L.)

Dehler, C. E., Secombes, C. J., & Martín, S. (2017) · Scientific Reports · doi:10.1038/s41598-017-13249-8 · Cited by 163 · see citing works

The malleable gut microbiome of juvenile rainbow trout (Oncorhynchus mykiss): Diet-dependent shifts of bacterial community structures

Michl, S. C., Ratten, J.-M., Beyer, M., Hasler, M., LaRoche, J., & Schulz, C. (2017) · PLoS ONE · doi:10.1371/journal.pone.0177735 · Cited by 158 · see citing works

Fish Skin and Gut Microbiomes Show Contrasting Signatures of Host Species and Habitat

Sylvain, F., Holland, A., Bouslama, S., Audet‐Gilbert, É., Lavoie, C., Val, A. L., & Derôme, N. (2020) · Applied and Environmental Microbiology · doi:10.1128/aem.00789-20 · Cited by 146 · see citing works

Host development overwhelms environmental dispersal in governing the ecological succession of zebrafish gut microbiota

Xiao, F., Zhu, W., Yu, Y., He, Z., Wu, B., Wang, C., Shu, L., Li, X., Yin, H., Wang, J., et al. (2021) · npj Biofilms and Microbiomes · doi:10.1038/s41522-020-00176-2 · Cited by 140 · see citing works

Current status of genome sequencing and its applications in aquaculture

Yue, G. H., & Wang, L. (2016) · Aquaculture · doi:10.1016/j.aquaculture.2016.10.036 · Cited by 140 · see citing works

Phylogenetic and functional characterization of the distal intestinal microbiome of rainbow troutOncorhynchus mykissfrom both farm and aquarium settings

Lyons, P. P., Turnbull, J. F., Dawson, K. A., & Crumlish, M. (2016) · Journal of Applied Microbiology · doi:10.1111/jam.13347 · Cited by 138 · see citing works

Exploring the interactions between the gut microbiome and the shifting surrounding aquatic environment in fisheries and aquaculture: A review

Chen, C.-Z., Li, P., Liu, L., & Li, Z. (2022) · Environmental Research · doi:10.1016/j.envres.2022.114202 · Cited by 137 · see citing works

Impact of Polypropylene Microplastics and Chemical Pollutants on European Sea Bass (Dicentrarchus labrax) Gut Microbiota and Health

Montero, D., Rimoldi, S., Torrecillas, S., Rapp, J., Moroni, F., Herrera, A., Gómez, M., Fernández-Montero, Á., & Terova, G. (2022) · Science of The Total Environment · doi:10.1016/j.scitotenv.2021.150402 · Cited by 127 · see citing works

A comparison of digestive strategies for fishes with different feeding habits: Digestive enzyme activities, intestinal morphology, and gut microbiota

Jiao, F., Zhang, L., Limbu, S. M., Hong, Y., Xie, Y., Yang, Z., Shang, Z., Kong, L., & Rong, H. (2023) · Ecology and Evolution · doi:10.1002/ece3.10499 · Cited by 135 · see citing works

Intestinal microbial communities of rainbow trout (Oncorhynchus mykiss) may be improved by feeding a Hermetia illucens meal/low-fishmeal diet

Rimoldi, S., Antonini, M., Gasco, L., Moroni, F., & Terova, G. (2021) · Fish Physiology and Biochemistry · doi:10.1007/s10695-020-00918-1 · Cited by 122 · see citing works

Effects of low‐level dietary microalgae supplementation on the distal intestinal microbiome of farmed rainbow trout Oncorhynchus mykiss (Walbaum)

Lyons, P. P., Turnbull, J. F., Dawson, K. A., & Crumlish, M. (2016) · Aquaculture Research · doi:10.1111/are.13080 · Cited by 124 · see citing works

Exploring Bacterial Communities in Aquaponic Systems

Eck, M., Sare, A. R., Massart, S., Schmautz, Z., Junge, R., Smits, T. H. M., & Jijakli, M. H. (2019) · Water · doi:10.3390/w11020260 · Cited by 114 · see citing works

Fine Flounder (Paralichthys adspersus) Microbiome Showed Important Differences between Wild and Reared Specimens

Ramírez, C., & Romero, J. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.00271 · Cited by 113 · see citing works

Sex, Age, and Bacteria: How the Intestinal Microbiota Is Modulated in a Protandrous Hermaphrodite Fish

Piazzon, M. C., Naya-Català, F., Simó‐Mirabet, P., Picard‐Sánchez, A., Roig, F. J., Calduch-Giner, J. À., Sitjà‐Bobadilla, A., & Pérez‐Sánchez, J. (2019) · Frontiers in Microbiology · doi:10.3389/fmicb.2019.02512 · Cited by 113 · see citing works

Recent Advances in Metagenomic Approaches, Applications, and Challenges

Lema, N. K., Gemeda, M. T., & Woldesemayat, A. A. (2023) · Current Microbiology · doi:10.1007/s00284-023-03451-5 · Cited by 104 · see citing works

Recent progress in the understanding of the gut microbiota of marine fishes

Ou, W., Yu, G., Zhang, Y., & Mai, K. (2021) · Marine Life Science & Technology · doi:10.1007/s42995-021-00094-y · Cited by 102 · see citing works

Managing the Microbial Community of Marine Fish Larvae: A Holistic Perspective for Larviculture

Vadstein, Ô., Attramadal, K. J. K., Bakke, I., Forberg, T., Ôlsen, Y., Verdegem, M. C. J., Giatsis, C., Skjermo, J., Aasen, I. M., Gatesoupe, F.-J., et al. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.01820 · Cited by 102 · see citing works

Harnessing the potentialities of probiotics, prebiotics, synbiotics, paraprobiotics, and postbiotics for shrimp farming

Goh, J. X. H., Tan, L. T., Law, J. W., Ser, H., Khaw, K. Y., Letchumanan, V., Lee, L., & Goh, B. H. (2022) · Reviews in Aquaculture · doi:10.1111/raq.12659 · Cited by 101 · see citing works

Long-term exposure of high concentration heavy metals induced toxicity, fatality, and gut microbial dysbiosis in common carp, Cyprinus carpio

Kakade, A., Salama, E., Pengya, F., Liu, P., & Li, X. (2020) · Environmental Pollution · doi:10.1016/j.envpol.2020.115293 · Cited by 100 · see citing works

Shotgun metagenomics offers novel insights into taxonomic compositions, metabolic pathways and antibiotic resistance genes in fish gut microbiome

Tyagi, A., Singh, B., Thammegowda, N. K. B., & Singh, N. K. (2019) · Archives of Microbiology · doi:10.1007/s00203-018-1615-y · Cited by 97 · see citing works

Reshaping gut bacterial communities after dietary Tenebrio molitor larvae meal supplementation in three fish species

Antonopoulou, E., Nikouli, E., Piccolo, G., Gasco, L., Gai, F., Chatzifotis, S., Mente, E., & Kormas, K. A. (2018) · Aquaculture · doi:10.1016/j.aquaculture.2018.12.013 · Cited by 96 · see citing works

Effects of garlic-supplemented diet on growth performance and intestinal microbiota of rainbow trout ( Oncorhynchus mykiss )

Büyükdeveci, M. E., Balcázar, J. L., Demirkale, İ., & Dikel, S. (2017) · Aquaculture · doi:10.1016/j.aquaculture.2017.12.022 · Cited by 95 · see citing works

Black Soldier Fly (Hermetia illucens) reared on roasted coffee by-product and Schizochytrium sp. as a sustainable terrestrial ingredient for aquafeeds production

Zarantoniello, M., Zimbelli, A., Randazzo, B., Compagni, M. D., Truzzi, C., Antonucci, M., Riolo, P., Loreto, N., Osimani, A., Milanović, V., et al. (2019) · Aquaculture · doi:10.1016/j.aquaculture.2019.734659 · Cited by 92 · see citing works

The Microbiome of Seriola lalandi of Wild and Aquaculture Origin Reveals Differences in Composition and Potential Function

Ramírez, C., & Romero, J. (2017) · Frontiers in Microbiology · doi:10.3389/fmicb.2017.01844 · Cited by 91 · see citing works

Host species and habitat shape fish-associated bacterial communities: phylosymbiosis between fish and their microbiome

Sadeghi, J., Chaganti, S. R., Johnson, T. B., & Heath, D. D. (2023) · Microbiome · doi:10.1186/s40168-023-01697-6 · Cited by 91 · see citing works

Salinity and fish age affect the gut microbiota of farmed Chinook salmon (Oncorhynchus tshawytscha)

Zhao, R., Symonds, J. E., Walker, S. P., Steiner, K., Carter, C. G., Bowman, J. P., & Nowak, B. F. (2020) · Aquaculture · doi:10.1016/j.aquaculture.2020.735539 · Cited by 89 · see citing works

Genetic selection for growth drives differences in intestinal microbiota composition and parasite disease resistance in gilthead sea bream

Piazzon, M. C., Naya-Català, F., Perera, E., Palenzuela, O. R., Sitjà‐Bobadilla, A., & Pérez‐Sánchez, J. (2020) · Microbiome · doi:10.1186/s40168-020-00922-w · Cited by 87 · see citing works

Next-generation sequencing characterization of the gut bacterial community of gilthead sea bream (Sparus aurata, L.) fed low fishmeal based diets with increasing soybean meal levels

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Whole gut microbiome composition of damselfish and cardinalfish before and after reef settlement

Parris, D. J., Brooker, R. M., Morgan, M. A., Dixson, D. L., & Stewart, F. J. (2016) · PeerJ · doi:10.7717/peerj.2412 · Cited by 81 · see citing works

Habitat and seasonality shape the structure of tench (Tinca tinca L.) gut microbiome

Dulski, T., Kozłowski, K., & Ciesielski, S. (2020) · Scientific Reports · doi:10.1038/s41598-020-61351-1 · Cited by 83 · see citing works

The Microbiome of the Gastrointestinal Tract of a Range-Shifting Marine Herbivorous Fish

Jones, J. C., DiBattista, J. D., Stat, M., Bunce, M., Boyce, M. C., Fairclough, D. V., Travers, M. J., & Huggett, M. J. (2018) · Frontiers in Microbiology · doi:10.3389/fmicb.2018.02000 · Cited by 79 · see citing works

Effects of dietary supplementation with Pediococcus acidilactici MA18/5M, galactooligosaccharide and their synbiotic on growth, innate immunity and disease resistance of rockfish ( Sebastes schlegeli )

Rahimnejad, S., Guardiola, F. A., Leclercq, E., Esteban, M. Á., Castex, M., Sotoudeh, E., & Lee, S. (2017) · Aquaculture · doi:10.1016/j.aquaculture.2017.09.020 · Cited by 77 · see citing works

Atlantic salmon ( Salmo salar L.) genetics in the 21st century: taking leaps forward in aquaculture and biological understanding

Houston, R. D., & Macqueen, D. J. (2018) · Animal Genetics · doi:10.1111/age.12748 · Cited by 72 · see citing works

Dietary supplementation with probiotics regulates gut microbiota structure and function in Nile tilapia exposed to aluminum

Yu, L., Qiao, N., Li, T., Yu, R., Zhai, Q., Tian, F., Zhao, J., Zhang, H., & Chen, W. (2019) · PeerJ · doi:10.7717/peerj.6963 · Cited by 73 · see citing works

Disturbance in the homeostasis of intestinal microbiota by a high-fat diet in the rice field eel ( albus)

Peng, M., Xue, J., Hu, Y., Wen, C., Hu, B., Jian, S., Liang, L., & Yang, G. (2018) · Aquaculture · doi:10.1016/j.aquaculture.2018.12.062 · Cited by 72 · see citing works

Host-Associated Bacterial Succession during the Early Embryonic Stages and First Feeding in Farmed Gilthead Sea Bream (Sparus aurata)

Nikouli, E., Meziti, A., Antonopoulou, E., Mente, E., & Kormas, K. A. (2019) · Genes · doi:10.3390/genes10070483 · Cited by 72 · see citing works

The Nidobiome: A Framework for Understanding Microbiome Assembly in Neonates

Campos-Cerda, F., & Bohannan, B. J. M. (2020) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2020.03.007 · Cited by 72 · see citing works

Dietary supplementation of black soldier fly ( Hermetica illucens) meal modulates gut microbiota, innate immune response and health status of marron ( Cherax cainii , Austin 2002) fed poultry-by-product and fishmeal based diets

Foysal, M. J., Fotedar, R. K., Tay, C. Y., & Gupta, S. K. (2019) · PeerJ · doi:10.7717/peerj.6891 · Cited by 72 · see citing works

Effects of probiotics Bacillus cereus NY5 and Alcaligenes faecalis Y311 used as water additives on the microbiota and immune enzyme activities in three mucosal tissues in Nile tilapia Oreochromis niloticus reared in outdoor tanks

Wang, M., Yi, M., Lu, M., Gao, F., Liu, Z., Huang, Q., Li, Q., & Zhu, D. (2020) · Aquaculture Reports · doi:10.1016/j.aqrep.2020.100309 · Cited by 71 · see citing works

Effect of virgin low density polyethylene microplastic ingestion on intestinal histopathology and microbiota of gilthead sea bream

Varó, I., Osorio, K., Estensoro, I., Naya-Català, F., Sitjà‐Bobadilla, A., Navarro, J. C., Pérez‐Sánchez, J., Torreblanca, A., & Piazzon, M. C. (2021) · Aquaculture · doi:10.1016/j.aquaculture.2021.737245 · Cited by 72 · see citing works

Modulation of Atlantic salmon (Salmo salar) gut microbiota composition and predicted metabolic capacity by feeding diets with processed black soldier fly (Hermetia illucens) larvae meals and fractions

Weththasinghe, P., Rocha, S. D. C., Øyås, O., Lagos, L. X., Hansen, J. Ø., Mydland, L. T., & Øverland, M. (2022) · Animal Microbiome · doi:10.1186/s42523-021-00161-w · Cited by 67 · see citing works

Metabarcoding Analyses of Gut Microbiota of Nile Tilapia (Oreochromis niloticus) from Lake Awassa and Lake Chamo, Ethiopia

Bereded, N. K., Curto, M., Domig, K. J., Abebe, G. B., Fanta, S. W., Waidbacher, H., & Meimberg, H. (2020) · Microorganisms · doi:10.3390/microorganisms8071040 · Cited by 66 · see citing works

Microbial symbiosis and coevolution of an entire clade of ancient vertebrates: the gut microbiota of sea turtles and its relationship to their phylogenetic history

Scheelings, T. F., Moore, R. J., Van, T. T. H., Klaassen, M., & Reina, R. D. (2020) · Animal Microbiome · doi:10.1186/s42523-020-00034-8 · Cited by 65 · see citing works

Research Progress of the Gut Microbiome in Hybrid Fish

Cui, X., Zhang, Q., Zhang, Q., Zhang, Y., Chen, H., Liu, G., & Zhu, L. (2022) · Microorganisms · doi:10.3390/microorganisms10050891 · Cited by 65 · see citing works

Growth Performance and Intestinal Microbiota Diversity in Pacific White Shrimp Litopenaeus vannamei Fed with a Probiotic Bacterium, Honey Prebiotic, and Synbiotic

Hasyimi, W., Widanarni, W., & Yuhana, M. (2020) · Current Microbiology · doi:10.1007/s00284-020-02117-w · Cited by 64 · see citing works

Effects of dietary non-starch polysaccharides level on the growth, intestinal flora and intestinal health of juvenile largemouth bass Micropterus salmoides

Liu, Y., Huang, H., Fan, J., Zhou, H., Zhang, Y., Cao, Y., Jiang, W., Zhang, W., Deng, J., & Tan, B. (2022) · Aquaculture · doi:10.1016/j.aquaculture.2022.738343 · Cited by 64 · see citing works

Influence of fish protein hydrolysate produced from industrial residues on antioxidant activity, cytokine expression and gut microbial communities in juvenile barramundi Lates calcarifer

Siddik, M. A. B., Chaklader, M. R., Foysal, M. J., Howieson, J., Fotedar, R. K., & Gupta, S. K. (2019) · Fish & Shellfish Immunology · doi:10.1016/j.fsi.2019.12.057 · Cited by 64 · see citing works

The gut bacterial microbiome of Nile tilapia (Oreochromis niloticus) from lakes across an altitudinal gradient

Bereded, N. K., Abebe, G. B., Fanta, S. W., Curto, M., Waidbacher, H., Meimberg, H., & Domig, K. J. (2022) · BMC Microbiology · doi:10.1186/s12866-022-02496-z · Cited by 63 · see citing works

A review on comparative analysis of marine and freshwater fish gut microbiomes: insights into environmental impact on gut microbiota

Singh, B. K., Thakur, K., Kumari, H., Mahajan, D., Sharma, D., Sharma, A. K., Kumar, S., Singh, B., Pankaj, P. P., & Kumar, R. (2024) · FEMS Microbiology Ecology · doi:10.1093/femsec/fiae169 · Cited by 66 · see citing works

Effects of water temperature on the gut microbiome and physiology of Chinook salmon (Oncorhynchus tshawytscha) reared in a freshwater recirculating system

Steiner, K., Laroche, O., Walker, S. P., & Symonds, J. E. (2022) · Aquaculture · doi:10.1016/j.aquaculture.2022.738529 · Cited by 62 · see citing works

The effects of protein and fiber content on gut structure and function in zebrafish (Danio rerio)

Leigh, S. C., Nguyen‐Phuc, B., & German, D. P. (2017) · Journal of Comparative Physiology B · doi:10.1007/s00360-017-1122-5 · Cited by 62 · see citing works

The Impact of Sampling Season and Catching Site (Wild and Aquaculture) on Gut Microbiota Composition and Diversity of Nile Tilapia (Oreochromis niloticus)

Bereded, N. K., Abebe, G. B., Fanta, S. W., Curto, M., Waidbacher, H., Meimberg, H., & Domig, K. J. (2021) · Biology · doi:10.3390/biology10030180 · Cited by 59 · see citing works

Time to integrate biotechnological approaches into fish gut microbiome research

Luna, G. M., Quero, G. M., Kokou, F., & Kormas, K. A. (2021) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2021.07.018 · Cited by 59 · see citing works

Cross-Talk Between Intestinal Microbiota and Host Gene Expression in Gilthead Sea Bream (Sparus aurata) Juveniles: Insights in Fish Feeds for Increased Circularity and Resource Utilization

Naya-Català, F., Pereira, G. D. V., Piazzon, M. C., Fernandes, A. M., Calduch-Giner, J. À., Sitjà‐Bobadilla, A., Conceição, L. E. C., & Pérez‐Sánchez, J. (2021) · Frontiers in Physiology · doi:10.3389/fphys.2021.748265 · Cited by 59 · see citing works

Distinct microbiota composition and fermentation products indicate functional compartmentalization in the hindgut of a marine herbivorous fish

Pardesi, B., Roberton, A. M., Lee, K. C. Y., Angert, E. R., Rosendale, D., Boycheva, S., White, W. L., & Clements, K. D. (2022) · Molecular Ecology · doi:10.1111/mec.16394 · Cited by 63 · see citing works

Diversity and composition of the gut microbiota of Atlantic salmon (Salmo salar) farmed in Irish waters

Fogarty, C., Burgess, C. M., Cotter, P. D., Cabrera‐Rubio, R., Whyte, P., Smyth, C., & Bolton, D. (2019) · Journal of Applied Microbiology · doi:10.1111/jam.14291 · Cited by 59 · see citing works

Effects of Thermal Stress on the Gut Microbiome of Juvenile Milkfish (Chanos chanos)

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Bacterial population in intestines of white shrimp, Litopenaeus vannamei fed a synbiotic containing Lactobacillus plantarum and galactooligosaccharide

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