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Infrared spectroscopy of proteins
Open accessAbstract
This review discusses the application of infrared spectroscopy to the study of proteins. The focus is on the mid-infrared spectral region and the study of protein reactions by reaction-induced infrared difference spectroscopy.
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“The Amide I normal mode of vibration is mainly to peptide-backbone C=O stretching (∼80 % of the mode) and N–H bending (∼20 % of the mode) adsorptions and it is highly sensitive to protein structural changes [57].”
From Ferritin adsorption onto chrysotile asbestos fibers influences the protein secondary structure (2024) · cites this paper as [57]
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“The two most common approaches to determine the secondary structure are: (i) fitting the amide I band with component bands [10,220,228] after identifying their position with band narrowing techniques [229 – 232] and (ii) decomposing the amide I band into basis spectra which have been calculated…”
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“Probably the most common application of infrared spectroscopy in protein studies is the analysis of secondary structure [1,3,4,6,8 – 10, 221, 222 ].”
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“Amino acid side chains have a number of characteristic normal modes in the mid infrared (Venyaminov and Kalnin 1990a; Barth 2007).”
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“1253 cm¡1, His’ v(CN) and d(CH) at 1104, 1090, 1106, and 1094 cm¡1, Thr’s n(CO) at 1075–1150 cm¡1 (NC) at 1092 cm¡1, Ser’s v(CO) or v(CC) at 983 cm¡1, v(NC), d(CH), and v(CC) at 1064 cm¡1, gt CH2 at 1063–1295 cm¡1, v(CC) and d (CH) at 1012–1016 cm¡1 (157).”
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“Nine normal modes are generated for the amide band of proteins and peptides ( Barth 2007 ).”
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“vibrations (for a complete description of this method sees the following references [103,104]).”
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“These increase in wave number according to the fact that frequency of stretching vibration reduced because of hydrogen bond formation [41].”
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“The amide I mode originates mainly from the C=O stretching vibration of the polypeptide backbone [32].”
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“The Amide I band is the most sensitive to changes in the secondary structure of the protein.([28,44]) The Amide I band was resolved into six component peaks which are clearly seen on the second derivative spectra (Figure 3b).”
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“Infrared spectroscopy can also be used to identify secondary-structure content (Barth, 2007).”
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“Amide II also indicates the changes in the secondary structure of gelatin (Barth, 2007); however, this band is usually considered more sensitive to hydration than structural changes of protein (Benjakul, Oungbho, Visessanguan, Thiansilakul, & Roytrakul, 2009).”
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“Other techniques [91] used to support research related to protein adsorption include capillary electrophoresis [99], mass spectrometry [100, 101] and particle mass spectrometry [102] (to identify and quantify proteins through fragmentation), various vibrational spectroscopictechniques [103, 104] (to study protein/subs…”
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Trehalose Renders the Dauer Larva of Caenorhabditis elegans Resistant to Extreme Desiccation
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Review: Detection and quantification of proteins in human urine
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“=O stretching and N-H bending 34 , respectively) were perturbed after encapsulation by HOF-101, further supporting the interfacial interaction between Cyt c and HOF-101 (Supplementary Fig.”
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“Even thought, around this wavenumber region (1370e1230 cm 1) previous works reported the contribution of proteins (Band amide III) (Barth & Zscherp, 2002), phenolic esters attached to polysaccharides (S en e, McCann, Wilson, & Grinter, 1994), and methyl ester groups (CH3), which could come, for instance, from 4-O-Megl…”
BackgroundMid-infrared spectroscopy for protein analysis: potential and challenges
López‐Lorente, Á. I., & Mizaikoff, B. (2016) · Analytical and Bioanalytical Chemistry · doi:10.1007/s00216-016-9375-5 · Cited by 179
“Hence a wealth of information on proteins may be derived from their IR spectrum, as detailed in [6].”
BackgroundNitrile groups as vibrational probes of biomolecular structure and dynamics: an overview
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Infrared electric field sampled frequency comb spectroscopy
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“The center frequencies of the amide I (1636 cm) and amide II bands (1549 cm) indicate a b-sheet structure for the protein, agreeing with previous studies (8, 54).”
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“FTIR as a quantitative tool was used with KBr pellet and potassium ferricyanide, K3Fe(CN)6 (2117 cm (1)), as an internal standard, to get characteristic parameters of chemical groups in the samples (Barth, 2007; Joshi, Kalyanasundaram, & Balasubramanian, 2013).”
BackgroundMethodLocalizing normal modes in large molecules
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Metadata
- Authors
- Barth, A.
- Affiliations
- Stockholm University (SE)
- Corresponding author
- Barth, Andreas
- ORCID
- Barth, Andreas
- Venue
- Biochimica et Biophysica Acta (BBA) - Bioenergetics
- Publisher
- Elsevier BV
- Published
- 2007-09
- Volume
- 1767
- Issue
- 9
- Pages
- 1073-1101
- ISSN
- 0005-2728 (ISSN-L)
- OpenAlex
- W1992045220
- Cited by
- 5,129
- References
- 444
- Citations by year
- 2026: 521 · 2025: 475 · 2024: 403 · 2023: 406 · 2022: 407 · 2021: 427 · 2020: 465 · 2019: 357 · 2018: 311 · 2017: 313 · 2016: 237 · 2015: 187 · 2014: 148 · 2013: 132 · 2012: 97
- FWCI
- 3.85
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Biochimica et Biophysica Acta (BBA) - Bioenergetics (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Biophysics › Spectroscopy Techniques in Biomedical and Chemical Research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Structure and Dynamics
- Physical Sciences › Physics and Astronomy › Atomic and Molecular Physics, and Optics › Spectroscopy and Quantum Chemical Studies
- Keywords
- infrared spectroscopy, proteins, mid-infrared spectra, protein reactions, protein structure
- MeSH terms
- Amides, Amino Acids, Enzymes, Hydrogen Bonding, Hydrogen-Ion Concentration, Models, Chemical, Molecular Conformation, Oscillometry, Oxidation-Reduction, Proteins, Protons, Spectrophotometry, Infrared, Time Factors, Water, Protein Structure, Secondary, Spectroscopy, Fourier Transform Infrared
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