Elucidating a magnetic resonance imaging-based neuroanatomic biomarker for psychosis: classification analysis using probabilistic brain atlas and machine learning algorithms
Open accessAbstract
Background No objective diagnostic biomarkers or laboratory tests have yet been developed for psychotic illness. Magnetic resonance imaging (MRI) studies consistently find significant abnormalities in multiple brain structures in psychotic patients relative to healthy control subjects, but these abnormalities show substantial overlap with anatomic variation that is in the normal range and therefore nondiagnostic. Recently, efforts have been made to discriminate psychotic patients from healthy individuals using machine-learning-based pattern classification methods on MRI data.Methods Three-dimensional cortical gray matter density (GMD) maps were generated for 36 patients with recent-onset psychosis and 36 sex- and age-matched control subjects using a cortical pattern matching method. Between-group differences in GMD were evaluated. Second, the sparse multinomial logistic regression classifier included in the Multivariate Pattern Analysis in Python machine-learning package was applied to the cortical GMD maps to discriminate psychotic patients from control subjects.Results Patients showed significantly lower GMD, particularly in prefrontal, cingulate, and lateral temporal brain regions. Pattern classification analysis achieved 86.1% accuracy in discriminating patients from controls using leave-one-out cross-validation.Conclusions These results suggest that even at the early stage of illness, psychotic patients present distinct patterns of regional cortical gray matter changes that can be discriminated from the normal pattern. These findings indicate that we can detect complex patterns of brain abnormality in early stages of psychotic illness, which has critical implications for early identification and intervention in individuals at ultra-high risk for developing psychosis/schizophrenia.
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Imaging studies have demonstrated relationships between cognitive deficits and structural or functional brain abnormalities.
“imaging studies have demonstrated relationships between cognitive deficits and structural or functional brain abnormalities.9–13”
From Clinical trials of potential cognitive-enhancing drugs in schizophrenia: what have we learned so far? (2013) · cites this paper as [10]
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Zhang, Y., Brady, M., & Smith, S. M. (2001) · IEEE Transactions on Medical Imaging · doi:10.1109/42.906424 · Cited by 7,628 · see citing works
A nonparametric method for automatic correction of intensity nonuniformity in MRI data
Sled, J. G., Zijdenbos, A. P., & Evans, A. C. (1998) · IEEE Transactions on Medical Imaging · doi:10.1109/42.668698 · Cited by 4,731 · see citing works
Distributed and overlapping representations of faces and objects in ventral temporal cortex
Haxby, J. V., Gobbini, M. I., Furey, M. L., Ishai, A., Schouten, J. L., & Pietrini, P. (2001) · Science · doi:10.1126/science.1063736 · Cited by 3,940 · see citing works
Structured Clinical Interview for DSM-IV Axis I Disorders
Spitzer, R. L., First, M. B., & Gibbon, M. (1997) · Medical Entomology and Zoology · Cited by 3,582 · see citing works
Automatic 3D intersubject registration of MR volumetric data in standardized Talairach space
Collins, D. L., Neelin, P., Peters, T. M., & Evans, A. C. (1994) · Journal of Computer Assisted Tomography · doi:10.1097/00004728-199403000-00005 · Cited by 3,431 · see citing works
Regression Analysis by Example.
Kmenta, J., Chatterjee, S., & Price, B. P. (1980) · Journal of the American Statistical Association · doi:10.2307/2287213 · Cited by 3,211 · see citing works
A review of MRI findings in schizophrenia
Shenton, M. E., Dickey, C. C., Frumin, M., & McCarley, R. W. (2001) · Schizophrenia Research · doi:10.1016/s0920-9964(01)00163-3 · Cited by 2,346 · see citing works
Evaluation of 14 nonlinear deformation algorithms applied to human brain MRI registration
Klein, A., Andersson, J., Ardekani, B. A., Ashburner, J., Avants, B., Chiang, M.-C., Christensen, G. E., Collins, D. L., Gee, J., Hellier, P., et al. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2008.12.037 · Cited by 2,227 · see citing works
Self-citationA Probabilistic Atlas of the Human Brain: Theory and Rationale for Its Development
Mazziotta, J. C., Toga, A. W., Evans, A., Fox, P. T., & Lancaster, J. L. (1995) · NeuroImage · doi:10.1006/nimg.1995.1012 · Cited by 1,578 · see citing works
Self-citationIdentifying natural images from human brain activity
Kay, K., Naselaris, T., Prenger, R., & Gallant, J. L. (2008) · Nature · doi:10.1038/nature06713 · Cited by 1,272 · see citing works
Detecting activations in PET and fMRI: levels of inference and power
Friston, K. J., Holmes, A., Poline, J.-B., Price, C. J., & Frith, C. D. (1996) · NeuroImage · doi:10.1006/nimg.1996.0074 · Cited by 1,148 · see citing works
Miller, T. J., McGlashan, T. H., Rosen, J. L., Somjee, L., Markovich, P. J., Stein, K., & Woods, S. W. (2002) · American Journal of Psychiatry · doi:10.1176/appi.ajp.159.5.863 · Cited by 872 · see citing works
Sparse multinomial logistic regression: fast algorithms and generalization bounds
Krishnapuram, B., Carin, L., Figueiredo, M. A. T., & Hartemink, A. J. (2005) · IEEE Transactions on Pattern Analysis and Machine Intelligence · doi:10.1109/tpami.2005.127 · Cited by 872 · see citing works
Automated 3-D Extraction of Inner and Outer Surfaces of Cerebral Cortex from MRI
MacDonald, D. J., Kabani, N. J., Avis, D., & Evans, A. C. (2000) · NeuroImage · doi:10.1006/nimg.1999.0534 · Cited by 850 · see citing works
Training and quality assurance with the structured clinical interview for DSM-iV (SCID-I/P)
Ventura, J., Liberman, R. P., Green, M. F., Shaner, A., & Mintz, J. (1998) · Psychiatry Research · doi:10.1016/s0165-1781(98)00038-9 · Cited by 591 · see citing works
Pantelis, C. (2005) · Schizophrenia Bulletin · doi:10.1093/schbul/sbi034 · Cited by 573 · see citing works
Regression Analysis by Example
(2007) · Technometrics · doi:10.1198/tech.2007.s498 · Cited by 548 · see citing works
PyMVPA: a Python Toolbox for Multivariate Pattern Analysis of fMRI Data
Hanke, M., Halchenko, Y. O., Sederberg, P. B., Hanson, S. J., Haxby, J. V., & Pollmann, S. (2009) · Neuroinformatics · doi:10.1007/s12021-008-9041-y · Cited by 468 · see citing works
Mapping cortical change in Alzheimer's disease, brain development, and schizophrenia
Thompson, P. M., Hayashi, K. M., Sowell, E. R., Gogtay, N., Giedd, J. N., Rapoport, J. L., de Zubicaray, G. I., Janke, A. L., Rose, S., Semple, J. M., et al. (2004) · NeuroImage · doi:10.1016/j.neuroimage.2004.07.071 · Cited by 396 · see citing works
Self-citationFan, Y., Resnick, S. M., Wu, X., & Davatzikos, C. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.02.043 · Cited by 288 · see citing works
Davatzikos, C. A., Shen, D. G., Gur, R. C., Wu, X., Liu, D., Yong Fan, A., Hughett, P., Turetsky, B. I., & Gur, R. E. (2005) · Archives of General Psychiatry · doi:10.1001/archpsyc.62.11.1218 · Cited by 270 · see citing works
Cortical variability and asymmetry in normal aging and Alzheimer's disease
Thompson, P. M. (1998) · Cerebral Cortex · doi:10.1093/cercor/8.6.492 · Cited by 269 · see citing works
Self-citationKawasaki, Y., Suzuki, M., Kherif, F., Takahashi, T., Zhou, S.-Y., Nakamura, K., Matsui, M., Sumiyoshi, T., Seto, H., & Kurachi, M. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2006.08.018 · Cited by 180 · see citing works
Narr, K. L., Thompson, P. M., Sharma, T., Moussai, J., Zoumalan, C. I., Rayman, J., & Toga, A. W. (2001) · American Journal of Psychiatry · doi:10.1176/appi.ajp.158.2.244 · Cited by 148 · see citing works
Self-citationMotion Artifact in Magnetic Resonance Imaging: Implications for Automated Analysis
Blumenthal, J. D., Zijdenbos, A. P., Molloy, E. A., & Giedd, J. N. (2002) · NeuroImage · doi:10.1006/nimg.2002.1076 · Cited by 137 · see citing works
Generative and recognition models for neuroanatomy
Friston, K. J., & Ashburner, J. (2004) · NeuroImage · doi:10.1016/j.neuroimage.2004.04.021 · Cited by 126 · see citing works
McGlashan, T. H., Miller, T. J., & Woods, S. W. (2001) · Schizophrenia Bulletin · doi:10.1093/oxfordjournals.schbul.a006896 · Cited by 124 · see citing works
The Psychosis Prodrome in Adolescent Patients Viewed Through the Lens of DSM-IV
MEYER, S. E., Bearden, C. E., Lux, S. R., Gordon, J. L., Johnson, J. K., O’Brien, M. P., Niendam, T. A., Loewy, R. L., Ventura, J., & Cannon, T. D. (2005) · Journal of Child and Adolescent Psychopharmacology · doi:10.1089/cap.2005.15.434 · Cited by 121 · see citing works
Self-citationYong Fan, A., Gur, R. E., Gur, R. C., Wu, X., Shen, D. G., Calkins, M. E., & Davatzikos, C. A. (2007) · Biological Psychiatry · doi:10.1016/j.biopsych.2007.03.015 · Cited by 119 · see citing works
PyMVPA: a unifying approach to the analysis of neuroscientific data
Hanke, M. (2009) · Frontiers in Neuroinformatics · doi:10.3389/neuro.11.003.2009 · Cited by 106 · see citing works
Yoon, U., Lee, J., Im, K., Shin, Y., Cho, B. H., Kim, I. Y., Kwon, J. S., & Kim, S. I. (2007) · NeuroImage · doi:10.1016/j.neuroimage.2006.11.021 · Cited by 101 · see citing works
Caprihan, A., Pearlson, G. D., & Calhoun, V. D. (2008) · NeuroImage · doi:10.1016/j.neuroimage.2008.04.255 · Cited by 81 · see citing works
fMRI pattern classification using neuroanatomically constrained boosting
Martínez‐Ramón, M., Koltchinskii, V. I., Heileman, G. L., & Posse, S. (2006) · NeuroImage · doi:10.1016/j.neuroimage.2006.01.022 · Cited by 59 · see citing works
Ventricular shape biomarkers for Alzheimer's disease in clinical MR images
Ferrarini, L., Palm, W. M., Olofsen, H., van der Landen, R., van Buchem, M. A., Reiber, J. H. C., & Behloul, F. (2008) · Magnetic Resonance in Medicine · doi:10.1002/mrm.21471 · Cited by 55 · see citing works
Automatic Subcortical Segmentation Using a Contextual Model
Morra, J. H., Tu, Z., Apostolova, L. G., Green, A. E., Toga, A. W., & Thompson, P. M. (2008) · Lecture notes in computer science · doi:10.1007/978-3-540-85988-8_24 · Cited by 47 · see citing works
Self-citationA method to classify schizophrenia using inter-task spatial correlations of functional brain images
Michael, A. M., Calhoun, V. D., Andreasen, N. C., & Baum, S. A. (2008) · Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) · doi:10.1109/iembs.2008.4650462 · Cited by 17 · see citing works
Flagged first, then by citations
1 of the 37 references couldn’t be matched to a known paper.
Cited by
Sorted by citations
Orrù, G., Pettersson-Yeo, W., Marquand, A. F., Sartori, G., & Mechelli, A. (2012) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2012.01.004 · Cited by 1,012 · see citing works
Single subject prediction of brain disorders in neuroimaging: Promises and pitfalls
Arbabshirani, M. R., Plis, S., Sui, J., & Calhoun, V. D. (2017) · NeuroImage · doi:10.1016/j.neuroimage.2016.02.079 · Cited by 912 · see citing works
Wolfers, T., Buitelaar, J. K., Beckmann, C. F., Franke, B., & Marquand, A. F. (2015) · Neuroscience & Biobehavioral Reviews · doi:10.1016/j.neubiorev.2015.08.001 · Cited by 290 · see citing works
Diagnostic neuroimaging across diseases
Klöppel, S., Abdulkadir, A., Jack, C. R., Koutsouleris, N., Mourão-Miranda, J., & Vemuri, P. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2011.11.002 · Cited by 279 · see citing works
Voxelwise genome-wide association study (vGWAS)
Stein, J. L., Hua, X., Lee, S., Ho, A. J., Leow, A., Toga, A. W., Saykin, A. J., Shen, L., Foroud, T., Pankratz, N., et al. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.02.032 · Cited by 272 · see citing works
Self-citationLocal cortical surface complexity maps from spherical harmonic reconstructions
Yotter, R. A., Nenadić, I., Ziegler, G., Thompson, P. M., & Christian Gaser, B. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.02.007 · Cited by 240 · see citing works
Self-citationHow Schizophrenia Develops: Cognitive and Brain Mechanisms Underlying Onset of Psychosis
Cannon, T. D. (2015) · Trends in Cognitive Sciences · doi:10.1016/j.tics.2015.09.009 · Cited by 228 · see citing works
Self-citationStructural and Functional Brain Abnormalities in Schizophrenia
Karlsgodt, K. H., Sun, D., & Cannon, T. D. (2010) · Current Directions in Psychological Science · doi:10.1177/0963721410377601 · Cited by 198 · see citing works
Self-citationBoosting power for clinical trials using classifiers based on multiple biomarkers
Kohannim, O., Hua, X., Hibar, D. P., Lee, S., Chou, Y.-Y., Toga, A. W., Jack, C. R., Weiner, M. W., & Thompson, P. M. (2010) · Neurobiology of Aging · doi:10.1016/j.neurobiolaging.2010.04.022 · Cited by 190 · see citing works
“We and others have found that a classifier can be given and entire brain image, and from it can derive the voxels whose signals are most promising for group classification (Sun et al., 2009).”
Self-citationClinical application of brain imaging for the diagnosis of mood disorders: the current state of play
Savitz, J. B., Rauch, S. L., & Drevets, W. C. (2013) · Molecular Psychiatry · doi:10.1038/mp.2013.25 · Cited by 189 · see citing works
Nieuwenhuis, M., van Haren, N. E. M., Pol, H. E. H., Cahn, W., Kahn, R. S., & Schnack, H. G. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2012.03.079 · Cited by 186 · see citing works
Classification of schizophrenia patients based on resting-state functional network connectivity
Arbabshirani, M. R., Kiehl, K. A., Pearlson, G. D., & Calhoun, V. D. (2013) · Frontiers in Neuroscience · doi:10.3389/fnins.2013.00133 · Cited by 181 · see citing works
Towards a brain‐based predictome of mental illness
Rashid, B., & Calhoun, V. D. (2020) · Human Brain Mapping · doi:10.1002/hbm.25013 · Cited by 160 · see citing works
Koutsouleris, N., Borgwardt, S., Meisenzahl, E. M., Ronald Bottlender, A., Möller, H., & Riecher‐Rössler, A. (2011) · Schizophrenia Bulletin · doi:10.1093/schbul/sbr145 · Cited by 156 · see citing works
Hua, X., Lee, S., Yanovsky, I., Leow, A. D., Chou, Y.-Y., Ho, A. J., Gutman, B., Toga, A. W., Jack, C. R., Bernstein, M. A., et al. (2009) · NeuroImage · doi:10.1016/j.neuroimage.2009.07.011 · Cited by 145 · see citing works
Self-citationCao, B., Cho, R. Y., Chen, D., Xiu, M., Wang, L., Soares, J. C., & Zhang, X. (2018) · Molecular Psychiatry · doi:10.1038/s41380-018-0106-5 · Cited by 145 · see citing works
Liu, F., Guo, W., Yu, D., Gao, Q. C., Gao, K., Xue, Z., Du, H., Zhang, J., Tan, C., Liu, Z., et al. (2012) · PLoS ONE · doi:10.1371/journal.pone.0040968 · Cited by 142 · see citing works
Keefe, R. S. E., Buchanan, R. W., Marder, S. R., Schooler, N. R., Dugar, A., Zivkov, M., & Stewart, M. (2013) · Schizophrenia Bulletin · doi:10.1093/schbul/sbr153 · Cited by 138 · see citing works
Sacchet, M. D., Prasad, G., Foland‐Ross, L. C., Thompson, P. M., & Gotlib, I. H. (2015) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2015.00021 · Cited by 138 · see citing works
Self-citationYamada, T., Hashimoto, R., Yahata, N., Ichikawa, N., Yoshihara, Y., Okamoto, Y., Kato, N., Takahashi, H., & Kawato, M. (2017) · The International Journal of Neuropsychopharmacology · doi:10.1093/ijnp/pyx059 · Cited by 133 · see citing works
Koutsouleris, N., Davatzikos, C. A., Ronald Bottlender, A., Patschurek‐Kliche, K., Scheuerecker, J., Decker, P., Christian Gaser, B., Möller, H., & Meisenzahl, E. M. (2011) · Schizophrenia Bulletin · doi:10.1093/schbul/sbr037 · Cited by 132 · see citing works
Mourão-Miranda, J., Reinders, A. A. T. S., Rocha-Rego, V., Lappin, J., Rondina, J. M., Morgan, C., Morgan, K. D., Fearon, P., Jones, P. B., Doody, G. A., et al. (2011) · Psychological Medicine · doi:10.1017/s0033291711002005 · Cited by 130 · see citing works
Surface-based TBM boosts power to detect disease effects on the brain: An N=804 ADNI study
Wang, Y., Song, Y., Rajagopalan, P., An, T., Liu, K., Chou, Y., Gutman, B. A., Toga, A. W., & Thompson, P. M. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.03.040 · Cited by 126 · see citing works
Self-citationPettersson‐Yeo, W., Benetti, S., Marquand, A. F., Dell’Acqua, F., Williams, S., Allen, P., Prata, D. P., McGuire, P. K., & Mechelli, A. (2013) · Psychological Medicine · doi:10.1017/s003329171300024x · Cited by 110 · see citing works
Decoding the anatomical network of spatial attention
Smith, D. V., Clithero, J. A., Rorden, C., & Karnath, H. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1210126110 · Cited by 107 · see citing works
Challenges for molecular neuroimaging with MRI
Lelyveld, V. S., Atanasijevic, T., & Jasanoff, A. (2010) · International Journal of Imaging Systems and Technology · doi:10.1002/ima.20221 · Cited by 106 · see citing works
Neuroimaging in Psychiatric Disorders
Masdeu, J. C. (2011) · Neurotherapeutics · doi:10.1007/s13311-010-0006-0 · Cited by 104 · see citing works
Zarogianni, E., Moorhead, T. W. J., & Lawrie, S. M. (2013) · NeuroImage Clinical · doi:10.1016/j.nicl.2013.09.003 · Cited by 93 · see citing works
Brain Imaging During the Transition from Psychosis Prodrome to Schizophrenia
Chung, Y., & Cannon, T. D. (2015) · The Journal of Nervous and Mental Disease · doi:10.1097/nmd.0000000000000286 · Cited by 92 · see citing works
Self-citationShi, J., Thompson, P. M., Gutman, B. A., & Wang, Y. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.04.018 · Cited by 90 · see citing works
Self-citationMachine learning and data mining: strategies for hypothesis generation
Oquendo, M. A., Baca‐García, E., Artés-Rodrı́guez, A., Pérez‐Cruz, F., Galfalvy, H., Blasco-Fontecilla, H., Madigan, D., & Duan, N. (2012) · Molecular Psychiatry · doi:10.1038/mp.2011.173 · Cited by 88 · see citing works
Iwabuchi, S. J., Liddle, P. F., & Palaniyappan, L. K. (2013) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2013.00095 · Cited by 83 · see citing works
Atlas-Based Quantification of Cardiac Remodeling Due to Myocardial Infarction
Zhang, X., Cowan, B. R., Bluemke, D. A., Finn, J. P., Fonseca, C. G., Kadish, A. H., Lee, D. C., Lima, J. A. C., Suinesiaputra, A., Young, A. A., et al. (2014) · PLoS ONE · doi:10.1371/journal.pone.0110243 · Cited by 82 · see citing works
Winterburn, J. L., Voineskos, A. N., Devenyi, G. A., Plitman, E., de la Fuente‐Sandoval, C., Bhagwat, N., Graff‐Guerrero, A., Knight, J., & Chakravarty, M. M. (2017) · Schizophrenia Research · doi:10.1016/j.schres.2017.11.038 · Cited by 79 · see citing works
GREENSTEIN, D. K., Malley, J. D., Weisinger, B., CLASEN, L. S., & Gogtay, N. (2012) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2012.00053 · Cited by 76 · see citing works
Takayanagi, Y., Takahashi, T., Orikabe, L., Mozue, Y., Kawasaki, Y., Nakamura, K., Sato, Y., Itokawa, M., Yamasue, H., Kasai, K., et al. (2011) · PLoS ONE · doi:10.1371/journal.pone.0021047 · Cited by 74 · see citing works
Luo, Y., Alvarez, T. L., Halperin, J. M., & Li, X. (2020) · NeuroImage Clinical · doi:10.1016/j.nicl.2020.102238 · Cited by 72 · see citing works
Applying tensor-based morphometry to parametric surfaces can improve MRI-based disease diagnosis
Wang, Y., Yuan, L., Shi, J., Greve, A., Ye, J., Toga, A. W., Reiss, A. L., & Thompson, P. M. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.02.011 · Cited by 72 · see citing works
Self-citationSchizophrenia – what does structural MRI show?
Haukvik, U. K., Hartberg, C. B., & Agartz, I. (2013) · Tidsskrift for Den norske legeforening · doi:10.4045/tidsskr.12.1084 · Cited by 69 · see citing works
Zarogianni, E., Storkey, A., Johnstone, E. C., Owens, D. G. C., & Lawrie, S. M. (2016) · Schizophrenia Research · doi:10.1016/j.schres.2016.08.027 · Cited by 66 · see citing works
Current trends in biomarker discovery and analysis tools for traumatic brain injury
Martinez, B. I., & Stabenfeldt, S. E. (2019) · Journal of Biological Engineering · doi:10.1186/s13036-019-0145-8 · Cited by 62 · see citing works
Diagnosing schizophrenia with network analysis and a machine learning method
Jo, Y. T., Joo, S. W., Shon, S., Kim, H., Kim, Y., & Lee, J. S. (2020) · International Journal of Methods in Psychiatric Research · doi:10.1002/mpr.1818 · Cited by 62 · see citing works
Lai, J. W., Ang, C. K. E., Acharya, U. R., & Cheong, K. (2021) · International Journal of Environmental Research and Public Health · doi:10.3390/ijerph18116099 · Cited by 50 · see citing works
Complex biomarker discovery in neuroimaging data: Finding a needle in a haystack
Atluri, G., Padmanabhan, K., Fang, G., Steinbach, M. S., Petrella, J. R., Lim, K. O., MacDonald, A. W., Samatova, N. F., Doraiswamy, P. M., & Kumar, V. (2013) · NeuroImage Clinical · doi:10.1016/j.nicl.2013.07.004 · Cited by 60 · see citing works
Squarcina, L., Castellani, U., Bellani, M., Perlini, C., Lasalvia, A., Dusi, N., Bonetto, C., Cristofalo, D., Tosato, S., Rambaldelli, G., et al. (2015) · NeuroImage · doi:10.1016/j.neuroimage.2015.12.007 · Cited by 60 · see citing works
A Safe Screening Rule for Sparse Logistic RegressionPreprint
Wang, J., Zhou, J., Liu, J., Wonka, P., & Ye, J. (2013) · arXiv (Cornell University) · doi:10.48550/arxiv.1307.4145 · Cited by 60 · see citing works
Neuroanatomical pattern classification in a population-based sample of first-episode schizophrenia
Zanetti, M. V., Schaufelberger, M. S., Doshi, J. J., Ou, Y., Ferreira, L. K., Menezes, P. R., Scazufca, M., Davatzikos, C. A., & Busatto, G. F. (2012) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2012.12.005 · Cited by 59 · see citing works
Koutsouleris, N., Christian Gaser, B., Ronald Bottlender, A., Davatzikos, C. A., Decker, P., Jäger, M., Schmitt, G., Reiser, M. F., Möller, H., & Meisenzahl, E. M. (2010) · Schizophrenia Research · doi:10.1016/j.schres.2010.08.032 · Cited by 59 · see citing works
Within- and cross-participant classifiers reveal different neural coding of information
Clithero, J. A., Smith, D. V., Carter, R., & Huettel, S. A. (2010) · NeuroImage · doi:10.1016/j.neuroimage.2010.03.057 · Cited by 59 · see citing works
Deep-learning-based classification of FDG-PET data for Alzheimer's disease categories
Singh, S., Srivastava, A., Mi, L., Chen, K., Wang, Y., Caselli, R. J., Goradia, D. D., & Reiman, E. M. (2017) · International Symposium on Medical Information Processing and Analysis (SIPAIM) · doi:10.1117/12.2294537 · Cited by 58 · see citing works
Koch, S., Hägele, C., Haynes, J., Heinz, A., Schlagenhauf, F., & Sterzer, P. (2015) · PLoS ONE · doi:10.1371/journal.pone.0119089 · Cited by 55 · see citing works
Liang, S., Li, Y., Zhang, Z., Kong, X., Wang, Q., Deng, W., Li, X., Zhao, L., Li, M., Meng, Y., et al. (2018) · Schizophrenia Bulletin · doi:10.1093/schbul/sby091 · Cited by 53 · see citing works
Overlapping and distinct gray and white matter abnormalities in schizophrenia and bipolar I disorder
Anderson, D., Ardekani, B. A., Burdick, K. E., Robinson, D. G., John, M., Malhotra, A. K., & Szeszko, P. R. (2013) · Bipolar Disorders · doi:10.1111/bdi.12096 · Cited by 50 · see citing works
Zhu, H., Qiu, C., Meng, Y., Yuan, M., Zhang, Y., Ren, Z., Li, Y., Huang, X., Gong, Q., Lui, S., et al. (2017) · Scientific Reports · doi:10.1038/srep43089 · Cited by 50 · see citing works
Multi-center machine learning in imaging psychiatry: A meta-model approach
Dluhoš, P., Schwarz, D., Cahn, W., van Haren, N. E. M., Kahn, R. S., Španiel, F., Horáček, J., Kašpárek, T., & Schnack, H. G. (2017) · NeuroImage · doi:10.1016/j.neuroimage.2017.03.027 · Cited by 50 · see citing works
Zhao, W. D., Guo, S., Linli, Z., Yang, A. C., Lin, C., & Tsai, S. (2019) · Schizophrenia Bulletin · doi:10.1093/schbul/sbz062 · Cited by 50 · see citing works
Nieuwenhuis, M., Schnack, H. G., van Haren, N. E. M., Lappin, J., Morgan, C., Reinders, A. A. T. S., Tordesillas‐Gutiérrez, D., Roiz‐Santiáñez, R., Schaufelberger, M. S., Rosa, P. G. P., et al. (2016) · NeuroImage · doi:10.1016/j.neuroimage.2016.07.027 · Cited by 49 · see citing works
Haller, S., Lövblad, K., Giannakopoulos, P., & Ville, D. V. D. (2014) · Brain Topography · doi:10.1007/s10548-014-0360-z · Cited by 48 · see citing works
Recent developments in multivariate pattern analysis for functional MRI
Yang, Z., Fang, F., & Weng, X. (2012) · Neuroscience Bulletin · doi:10.1007/s12264-012-1253-3 · Cited by 46 · see citing works
Decoding Continuous Variables from Neuroimaging Data: Basic and Clinical Applications
Cohen, J. R., Asarnow, R. F., Sabb, F. W., Bilder, R. M., Bookheimer, S. Y., Knowlton, B. J., & Poldrack, R. A. (2011) · Frontiers in Neuroscience · doi:10.3389/fnins.2011.00075 · Cited by 44 · see citing works
Modinos, G., Pettersson‐Yeo, W., Allen, P., McGuire, P. K., Aleman, A., & Mechelli, A. (2011) · NeuroImage · doi:10.1016/j.neuroimage.2011.10.048 · Cited by 44 · see citing works
Dazzan, P. (2014) · Dialogues in Clinical Neuroscience · doi:10.31887/dcns.2014.16.4/pdazzan · Cited by 44 · see citing works
Yoon, J. H., Nguyen, D. V., McVay, L. M., Deramo, P. J., Minzenberg, M., Ragland, J. D., Niendam, T. A., Solomon, M., & Carter, C. S. (2012) · Schizophrenia Research · doi:10.1016/j.schres.2012.01.001 · Cited by 44 · see citing works
Maximum-uncertainty linear discrimination analysis of first-episode schizophrenia subjects
Kašpárek, T., Thomaz, C. E., Sato, J. R., Schwarz, D., Janoušová, E., Mareček, R., Přikryl, R., Vanicek, J., Fujita, A., & Češková, E. (2011) · Psychiatry Research Neuroimaging · doi:10.1016/j.pscychresns.2010.09.016 · Cited by 42 · see citing works
Steele, V. R., Rao, V., Calhoun, V. D., & Kiehl, K. A. (2015) · NeuroImage · doi:10.1016/j.neuroimage.2015.12.013 · Cited by 42 · see citing works
Aksić, M., Radonjić, N. V., Aleksić, D., Jevtić, G., Marković, B., Petronijević, N., Radonjić, V., & Filipović, B. (2013) · Acta Neurobiologiae Experimentalis · doi:10.55782/ane-2013-1946 · Cited by 41 · see citing works
Addressing Confounding in Predictive Models with an Application to Neuroimaging
Linn, K. A., Gaonkar, B., Doshi, J. J., Davatzikos, C. A., & Shinohara, R. T. (2015) · The International Journal of Biostatistics · doi:10.1515/ijb-2015-0030 · Cited by 41 · see citing works
Rikandi, E., Pamilo, S., Mäntylä, T. J. S., Suvisaari, J., Kieseppä, T., Hari, R., Seppä, M., & Raij, T. T. (2016) · Psychological Medicine · doi:10.1017/s0033291716002609 · Cited by 40 · see citing works
Ariadne: analysis for machine learning programs
Dolby, J., Shinnar, A., Allain, A., & Reinen, J. (2018) · ACM SIGPLAN International Workshop on Machine Learning and Programming Languages (MAPL) · doi:10.1145/3211346.3211349 · Cited by 39 · see citing works
Pattern‐information fMRI: New questions which it opens up and challenges which face it
Raizada, R. D. S., & Kriegeskorte, N. (2010) · International Journal of Imaging Systems and Technology · doi:10.1002/ima.20225 · Cited by 39 · see citing works
Fu, Y., Zhang, J., Li, Y., Shi, J., Zou, Y., Guo, H., Li, Y., Yao, Z., Wang, Y., & Hu, B. (2020) · Progress in Neuro-Psychopharmacology and Biological Psychiatry · doi:10.1016/j.pnpbp.2020.109989 · Cited by 38 · see citing works
Valli, I., Marquand, A. F., Mechelli, A., Raffin, M., Allen, P., Seal, M. L., & McGuire, P. K. (2016) · Frontiers in Psychiatry · doi:10.3389/fpsyt.2016.00052 · Cited by 36 · see citing works
Diagnostic value of structural and diffusion imaging measures in schizophrenia
Lee, J. S., Chon, M., Kim, H., Yogesh Rathi, A., Sylvain Bouix, A., Shenton, M. E., & Kubicki, M. R. (2018) · NeuroImage Clinical · doi:10.1016/j.nicl.2018.02.007 · Cited by 36 · see citing works
Schizophrenic patient identification using graph-theoretic features of resting-state fMRI data
Algunaid, R. F., Algumaei, A. H., Rushdi, M. A., & Yassine, I. A. (2018) · Biomedical Signal Processing and Control · doi:10.1016/j.bspc.2018.02.018 · Cited by 36 · see citing works
Wavelet-domain regression and predictive inference in psychiatric neuroimaging
Reiss, P. T., Huo, L., Zhao, Y., Kelly, C. A. M., & Ogden, R. T. (2015) · The Annals of Applied Statistics · doi:10.1214/15-aoas829 · Cited by 34 · see citing works
A survey on AI and decision support systems in psychiatry – Uncovering a dilemma
Bertl, M., Ross, P., & Draheim, D. (2022) · Expert Systems with Applications · doi:10.1016/j.eswa.2022.117464 · Cited by 31 · see citing works
Feature and decision-level fusion for schizophrenia detection based on resting-state fMRI data
Algumaei, A. H., Algunaid, R. F., Rushdi, M. A., & Yassine, I. A. (2022) · PLoS ONE · doi:10.1371/journal.pone.0265300 · Cited by 31 · see citing works
Wu, M., Wu, H. E., Mwangi, B., Sanches, M., Selvaraj, S., Zunta‐Soares, G. B., & Soares, J. C. (2015) · Journal of Psychiatric Research · doi:10.1016/j.jpsychires.2015.01.015 · Cited by 30 · see citing works
Squarcina, L., Perlini, C., Peruzzo, D., Castellani, U., Marinelli, V., Bellani, M., Rambaldelli, G., Lasalvia, A., Tosato, S., Santi, K. D., et al. (2015) · Schizophrenia Research · doi:10.1016/j.schres.2015.03.017 · Cited by 30 · see citing works
Prediction of pediatric bipolar disorder using neuroanatomical signatures of the amygdala
Mwangi, B., Spiker, D. E., Zunta‐Soares, G. B., & Soares, J. C. (2014) · Bipolar Disorders · doi:10.1111/bdi.12222 · Cited by 29 · see citing works
de Pierrefeu, A., Löfstedt, T., Laidi, C., Hadj‐Selem, F., Bourgin, J., Hájek, T., Španiel, F., Kolenič, M., Ciuciu, P., Hamdani, N., et al. (2018) · Acta Psychiatrica Scandinavica · doi:10.1111/acps.12964 · Cited by 28 · see citing works
Janoušová, E., Schwarz, D., & Kašpárek, T. (2015) · Psychiatry Research Neuroimaging · doi:10.1016/j.pscychresns.2015.03.004 · Cited by 26 · see citing works
Koutsouleris, N., Christian Gaser, B., Patschurek‐Kliche, K., Scheuerecker, J., Ronald Bottlender, A., Decker, P., Schmitt, G., Reiser, M. F., Möller, H., & Meisenzahl, E. M. (2011) · Human Brain Mapping · doi:10.1002/hbm.21342 · Cited by 25 · see citing works
Initiative, A. T. A. D. N., Wang, X., Ren, P., Mapstone, M. E., Conwell, Y., Porsteinsson, A. P., Foxe, J. J., Raizada, R. D. S., & Lin, F. V. (2017) · Brain Imaging and Behavior · doi:10.1007/s11682-017-9767-y · Cited by 25 · see citing works
Andrei Irimia, A., Lei, X., Torgerson, C. M., Jacokes, Z., Abe, S., & Horn, J. D. V. (2018) · Frontiers in Computational Neuroscience · doi:10.3389/fncom.2018.00093 · Cited by 25 · see citing works
Bendfeldt, K., Smieskova, R., Koutsouleris, N., Klöppel, S., Schmidt, A., Walter, A., Harrisberger, F., Wrege, J. S., Simon, A. E., Taschler, B., et al. (2015) · NeuroImage Clinical · doi:10.1016/j.nicl.2015.09.015 · Cited by 24 · see citing works
Yamamoto, M., Bagarinao, E., Kushima, I., Takahashi, T., Sasabayashi, D., Inada, T., Suzuki, M., Iidaka, T., & Ozaki, N. (2020) · PLoS ONE · doi:10.1371/journal.pone.0239615 · Cited by 24 · see citing works
Neural signatures underlying deliberation in human foraging decisions
Abram, S. V., Hanke, M., Redish, A. D., & MacDonald, A. W. (2019) · Cognitive Affective & Behavioral Neuroscience · doi:10.3758/s13415-019-00733-z · Cited by 21 · see citing works
Treadway, M. T., & Buckholtz, J. W. (2011) · Child and Adolescent Psychiatric Clinics of North America · doi:10.1016/j.chc.2011.03.012 · Cited by 21 · see citing works
Wu, J., Dong, Q., Gui, J., Zhang, J., Su, Y., Chen, K., Thompson, P. M., Caselli, R. J., Reiman, E. M., Ye, J., et al. (2021) · Frontiers in Neuroscience · doi:10.3389/fnins.2021.669595 · Cited by 19 · see citing works
Self-citationTsao, S., Gajawelli, N., Zhou, J., Shi, J., Ye, J., Wang, Y., & Leporé, N. (2017) · Brain and Behavior · doi:10.1002/brb3.733 · Cited by 18 · see citing works
Keulers, E. H. H., Goulas, A., Jolles, J., & Stiers, P. (2012) · NeuroImage · doi:10.1016/j.neuroimage.2011.12.079 · Cited by 16 · see citing works
Podichetty, J. T., Silvola, R. M., Rodriguez‐Romero, V., Bergstrom, R. F., Vakilynejad, M., Bies, R. R., & Stratford, R. E. (2021) · Clinical and Translational Science · doi:10.1111/cts.13035 · Cited by 16 · see citing works
Statistical learning analysis in neuroscience: aiming for transparency
Hanke, M. (2010) · Frontiers in Neuroscience · doi:10.3389/neuro.01.007.2010 · Cited by 16 · see citing works
Dong, Q., Zhang, J., Li, Q., Wang, J., Leporé, N., Thompson, P. M., Caselli, R. J., Ye, J., Wang, Y., & Initiative, A. D. N. (2020) · Journal of Alzheimer s Disease · doi:10.3233/jad-190973 · Cited by 15 · see citing works
Self-citationClassification of brain disease in magnetic resonance images using two-stage local feature fusion
Li, T., Li, W., Yang, Y., & Zhang, W. (2017) · PLoS ONE · doi:10.1371/journal.pone.0171749 · Cited by 14 · see citing works
Estimating Local Surface Complexity Maps Using Spherical Harmonic Reconstructions
Yotter, R. A., Thompson, P. M., Nenadić, I., & Christian Gaser, B. (2010) · Lecture notes in computer science · doi:10.1007/978-3-642-15745-5_21 · Cited by 13 · see citing works
Self-citationGREENSTEIN, D. K., Kataria, R., Gochman, P., Dasgupta, A., Malley, J. D., Rapoport, J. L., & Gogtay, N. (2014) · Journal of Child and Adolescent Psychopharmacology · doi:10.1089/cap.2013.0139 · Cited by 13 · see citing works
Janoušová, E., Montana, G., Kašpárek, T., & Schwarz, D. (2016) · Frontiers in Neuroscience · doi:10.3389/fnins.2016.00392 · Cited by 13 · see citing works
Multimodal fusion of brain signals for robust prediction of psychosis transition
Reinen, J., Polosecki, P. I., Castro, E., Corcoran, C. M., Cecchi, G., & Colibazzi, T. (2024) · Schizophrenia · doi:10.1038/s41537-024-00464-2 · Cited by 12 · see citing works
- Authors
- Sun, D., van Erp, T. G. M., Thompson, P. M., Bearden, C. E., Daley, M., Kushan, L., Hardt, M. E., Nuechterlein, K. H., Toga, A. W., & Cannon, T. D.
- Affiliations
- University of California, Los Angeles (US)
- Corresponding author
- Cannon, Tyrone D.
- ORCID
- Venue
- Biological Psychiatry
- Publisher
- Elsevier BV
- Published
- 2009-12
- Volume
- 66
- Issue
- 11
- Pages
- 1055-1060
- ISSN
- 0006-3223 (ISSN-L)
- PMC
- PMC3192809
- OpenAlex
- W2039397313
- Cited by
- 148
- References
- 37
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 1 · 2023: 2 · 2022: 5 · 2021: 9 · 2020: 8 · 2019: 5 · 2018: 8 · 2017: 12 · 2016: 10 · 2015: 16 · 2014: 12 · 2013: 18 · 2012: 13
- FWCI
- 8.25
- Type
- journal article
- Language
- en
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Biological Psychiatry (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- U.S. Public Health Service
- National Institute on Aging (R01AG020098, R56AG020098, AG020098)
- National Institute of Mental Health (MH037705, K23MH079028, R01MH065079, R01MH037705, P50MH066286, MH65079)
- National Institute of Biomedical Imaging and Bioengineering (R01EB008432, R01EB008281, R01EB007813, EB008281, EB 007813, EB008432)
- National Center for Research Resources (P41RR013642, U54RR021813)
- Eunice Kennedy Shriver National Institute of Child Health and Human Development (HD 050735, R01HD050735)
- Topics
- Health Sciences › Medicine › Psychiatry and Mental health › Schizophrenia research and treatment
- Life Sciences › Neuroscience › Cognitive Neuroscience › Functional Brain Connectivity Studies
- Health Sciences › Medicine › Psychiatry and Mental health › Dementia and Cognitive Impairment Research
- Keywords
- psychosis, schizophrenia, probabilistic brain atlas, multivariate pattern analysis, sparse multinomial logistic regression, recent-onset psychosis, prefrontal cortex, cingulate cortex, lateral temporal cortex, clinical high risk for psychosis, early detection of psychosis
- MeSH terms
- Adult, Algorithms, Atlases as Topic, Brain Mapping, Cerebral Cortex, Female, Humans, Image Interpretation, Computer-Assisted, Image Processing, Computer-Assisted, Magnetic Resonance Imaging, Male, Predictive Value of Tests, Psychotic Disorders, Statistics as Topic, Biomarkers
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