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Protein Tyrosine Phosphatases in the Human Genome
Open accessAbstract
Tyrosine phosphorylation is catalyzed by protein tyrosine kinases, which are represented by 90 genes in the human genome. Here, we present the set of 107 genes in the human genome that encode members of the four protein tyrosine phosphatase (PTP) families. The four families of PTPases, their substrates, structure, function, regulation, and the role of these enzymes in human disease will be discussed.
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“Twenty-five genes encode for DUSPs in the human genome, with DUSP24 and DUSP27 lacking enzymatic activity.12”
From Molecular basis of MAP kinase regulation (2013) · cites this paper as [12]
Citations
Cites
The protein kinase complement of the human genome
Manning, G., Whyte, D. B., Martinez, R., Hunter, T., & Sudarsanam, S. (2002) · Science · doi:10.1126/science.1075762 · Cited by 8,145
Self-citationElchebly, M., Payette, P., Michaliszyn, E., Cromlish, W., Collins, S., Loy, A. L., Normandin, D., Cheng, A., Himms-Hagen, J., Chan, C.-C., et al. (1999) · Science · doi:10.1126/science.283.5407.1544 · Cited by 2,210
Liaw, D., Marsh, D. J., Li, J., Dahia, P. L. M., Wang, S. I., Zheng, Z., Bose, S., Call, K. M., Tsou, H. C., Peacoke, M., et al. (1997) · Nature Genetics · doi:10.1038/ng0597-64 · Cited by 2,067
Mutations in PTPN11, encoding the protein tyrosine phosphatase SHP-2, cause Noonan syndrome
Tartaglia, M., Mehler, E. L., Goldberg, R. B., Zampino, G., Brunner, H. G., Kremer, H., van der Burgt, I., Crosby, A. H., Ion, A., Jeffery, S., et al. (2001) · Nature Genetics · doi:10.1038/ng772 · Cited by 1,736
A functional variant of lymphoid tyrosine phosphatase is associated with type I diabetes
Bottini, N., Musumeci, L., Alonso, A., Rahmouni, S., Nika, K., Rostamkhani, M., MacMurray, J. P., Meloni, T., Lucarelli, P., Pellecchia, M., et al. (2004) · Nature Genetics · doi:10.1038/ng1323 · Cited by 1,419
Self-citationA thousand and one protein kinases
Hunter, T. R. (1987) · Cell · doi:10.1016/0092-8674(87)90509-5 · Cited by 1,057
Self-citationCrystal Structure of the Tyrosine Phosphatase SHP-2
Hof, P., Pluskey, S., Dhe‐Paganon, S., Eck, M. J., & Shoelson, S. E. (1998) · Cell · doi:10.1016/s0092-8674(00)80938-1 · Cited by 997
Redox regulation of protein tyrosine phosphatase 1B involves a sulphenyl-amide intermediate
Salmeen, A., Andersen, J. N., Myers, M. P., Meng, T.-C., Hinks, J. A., Tonks, N. K., & Barford, D. (2003) · Nature · doi:10.1038/nature01680 · Cited by 951
Protein Tyrosine Phosphatases: A Diverse Family of Intracellular and Transmembrane Enzymes
Fischer, E. H., Charbonneau, H., & Tonks, N. K. (1991) · Science · doi:10.1126/science.1650499 · Cited by 950
CRYSTAL STRUCTURE OF HUMAN PROTEIN TYROSINE PHOSPHATASE 1B
Barford, D., Flint, A. J., & Tonks, N. K. (1994) · Science · doi:10.1126/science.8128219 · Cited by 761
The Phosphatase Cdc14 Triggers Mitotic Exit by Reversal of Cdk-Dependent Phosphorylation
Visintin, R., Craig, K. L., Hwang, E. S., Prinz, S., Tyers, M., & Amon, A. (1998) · Molecular Cell · doi:10.1016/s1097-2765(00)80286-5 · Cited by 725
Oxidation state of the active-site cysteine in protein tyrosine phosphatase 1B
van Montfort, R. L. M., Congreve, M., Tisi, D., Carr, R. A. E., & Jhoti, H. (2003) · Nature · doi:10.1038/nature01681 · Cited by 642
Laporte, J., Hu, L. J., Kretz, C., Mandel, J.-L., Kioschis, P., Coy, J. F., Klauck, S. M., Poustka, A., & Dahl, N. (1996) · Nature Genetics · doi:10.1038/ng0696-175 · Cited by 639
Li, X., Ohgi, K. A., Zhang, J., Krones, A., Bush, K. T., Glass, C. K., Nigám, S. K., Aggarwal, A. K., Maas, R. L., Rose, D. W., et al. (2003) · Nature · doi:10.1038/nature02083 · Cited by 636
Walton, K. M., & Dixon, J. E. (1993) · Annual Review of Biochemistry · doi:10.1146/annurev.bi.62.070193.000533 · Cited by 537
Self-citationFrom Form to Function: Signaling by Protein Tyrosine Phosphatases
Tonks, N. K., & Neel, B. G. (1996) · Cell · doi:10.1016/s0092-8674(00)81357-4 · Cited by 530
Minassian, B. A., Lee, J. R., Herbrick, J.-A., Huizenga, J. J., Soder, S., Mungall, A. J. J., Dunham, I., Gardner, R. J., Fong, C.-Y. G., Carpenter, S., et al. (1998) · Nature Genetics · doi:10.1038/2470 · Cited by 490
Bolino, A., Muglia, M., Conforti, F. L., Leguern, É., Salih, M. A. M., Georgiou, D.-M., Christodoulou, K., Hausmanowa-Petrusewicz, I., Mandich, P., Schenone, A. E., et al. (2000) · Nature Genetics · doi:10.1038/75542 · Cited by 473
Salmeen, A. E., Andersen, J. N., Myers, M. P., Tonks, N. K., & Barford, D. (2000) · Molecular Cell · doi:10.1016/s1097-2765(00)00137-4 · Cited by 470
Guan, K., & Dixon, J. E. (1991) · Journal of Biological Chemistry · doi:10.1016/s0021-9258(19)47335-3 · Cited by 460
Self-citationZhang, Z. (2002) · The Annual Review of Pharmacology and Toxicology · doi:10.1146/annurev.pharmtox.42.083001.144616 · Cited by 435
Puius, Y. A., Zhao, Y. C., Sullivan, M., Lawrence, D. S., Almo, S. C., & Zhang, Z. (1997) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.94.25.13420 · Cited by 406
A Tyr/Ser protein phosphatase encoded by vaccinia virus
Guan, K., Broyles, S. S., & Dixon, J. E. (1991) · Nature · doi:10.1038/350359a0 · Cited by 399
Self-citationActivation of the tumour suppressor kinase LKB1 by the STE20‐like pseudokinase STRAD
Baas, A. F., Boudeau, J., Sapkota, G. P., Smit, L., Medema, R. H., Morrice, N. A., Alessi, D. R., & Clevers, H. C. (2003) · The EMBO Journal · doi:10.1093/emboj/cdg292 · Cited by 385
PEST Domain-Enriched Tyrosine Phosphatase (PEP) Regulation of Effector/Memory T Cells
Hasegawa, K., Martin, F., Huang, G., Tumas, D., Diehl, L. J., & Chan, A. C. (2004) · Science · doi:10.1126/science.1092138 · Cited by 379
Crystal Structure of the Dual Specificity Protein Phosphatase VHR
Yuvaniyama, J., Denu, J. M., Dixon, J. E., & Saper, M. A. (1996) · Science · doi:10.1126/science.272.5266.1328 · Cited by 344
Self-citationThe rhodanese/Cdc25 phosphatase superfamily
Bordo, D., & Peer Bork, B. (2002) · EMBO Reports · doi:10.1093/embo-reports/kvf150 · Cited by 327
Czernilofsky, A. P., Levinson, A. D., VARMUS, H. E., Bishop, J. M., Tischer, E., & Goodman, H. M. (1980) · Nature · doi:10.1038/287198a0 · Cited by 321
Azzedine, H., Bolino, A., Taïeb, T., Birouk, N., Duca, M. D., Bouhouche, A., Benamou, S., Mrabet, A., Hamadouche, T., Chkili, T., et al. (2003) · The American Journal of Human Genetics · doi:10.1086/375034 · Cited by 314
Andersen, J. N., Jansen, P. G., Echwald, S. M., Mortensen, O. H., Fukada, T., Vecchio, R. D., Tonks, N. K., & M⊘ller, N. P. H. (2004) · The FASEB Journal · doi:10.1096/fj.02-1212rev · Cited by 311
Structure and function of the WW domain
Sudol, M. (1996) · Progress in Biophysics and Molecular Biology · doi:10.1016/s0079-6107(96)00008-9 · Cited by 296
Crystal Structure of the Catalytic Domain of the Human Cell Cycle Control Phosphatase, Cdc25A
Fauman, E. B., Cogswell, J. P., Lovejoy, B., Rocque, W. J., Holmes, W. D., Montana, V. G., Piwnica-Worms, H. M., Rink, M. J., & Saper, M. A. (1998) · Cell · doi:10.1016/s0092-8674(00)81190-3 · Cited by 286
Potent Stimulation of SH-PTP2 Phosphatase Activity by Simultaneous Occupancy of Both SH2 Domains
Pluskey, S., Wandless, T. J., Walsh, C. T., & Shoelson, S. E. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.7.2897 · Cited by 285
Positive and negative regulation of T-cell activation through kinases and phosphatases
Mustelin, T., & Taskén, K. (2003) · Biochemical Journal · doi:10.1042/bj20021637 · Cited by 275
Self-citationCharbonneau, H., Tonks, N. K., Kumar, S., Diltz, C. D., Harrylock, M., Cool, D. E., Krebs, E. G., Fischer, E. H., & Walsh, K. A. (1989) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.86.14.5252 · Cited by 274
Solimena, M., Dirkx, R. A., Hermel, J., Pleasic‐Williams, S., Shapiro, J., Caron, L. A., & Rabin, D. U. (1996) · The EMBO Journal · doi:10.1002/j.1460-2075.1996.tb00564.x · Cited by 256
The transcription factor Eyes absent is a protein tyrosine phosphatase
Tootle, T. L., Silver, S. J., Davies, E. L., Newman, V., Latek, R. R., Mills-Henry, I., Selengut, J., Parlikar, B. E. W., & Rebay, I. (2003) · Nature · doi:10.1038/nature02097 · Cited by 254
Eyes absent represents a class of protein tyrosine phosphatases
Rayapureddi, J. P., Kattamuri, C., Steinmetz, B. D., Frankfort, B. J., Ostrin, E. J., Mardon, G., & Hegde, R. S. (2003) · Nature · doi:10.1038/nature02093 · Cited by 240
A novel complex of membrane proteins required for formation of a spherical nucleus
Siniossoglou, S., Santos‐Rosa, H., Rappsilber, J., Mann, M., & Hurt, E. (1998) · The EMBO Journal · doi:10.1093/emboj/17.22.6449 · Cited by 212
Cloning and expression of a protein-tyrosine-phosphatase.
Guan, K., Haun, R. S., Watson, S. J., Geahlen, R. L., & Dixon, J. E. (1990) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.87.4.1501 · Cited by 212
Self-citationThe crystal structure of a low-molecular-weight phosphotyrosine protein phosphatase
Su, X., Taddei, N., Stefani, M., Ramponi, G., & Nordlund, P. (1994) · Nature · doi:10.1038/370575a0 · Cited by 204
Pei, D., Lorenz, U. M., Klingmüller, U., Neel, B. G., & Walsh, C. T. (1994) · Biochemistry · doi:10.1021/bi00255a030 · Cited by 198
A point mutation in PTPRC is associated with the development of multiple sclerosis
Jacobsen, M., Schweer, D., Ziegler, A., Gaber, R., Schock, S., Schwinzer, R., Wonigeit, K., Lindert, R.-B., Kantarci, O. H., Schaefer-Klein, J. L., et al. (2000) · Nature Genetics · doi:10.1038/82659 · Cited by 196
Najarro, P., Traktman, P., & Lewis, J. A. (2001) · Journal of Virology · doi:10.1128/jvi.75.7.3185-3196.2001 · Cited by 189
Expression cloning of a human dual-specificity phosphatase.
Ishibashi, T., Bottaro, D. P., Chan, A. M.-L., Miki, T., & Aaronson, S. A. (1992) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.89.24.12170 · Cited by 184
PTEN and myotubularin phosphatases: from 3-phosphoinositide dephosphorylation to disease
Wishart, M. J., & Dixon, J. E. (2002) · Trends in Cell Biology · doi:10.1016/s0962-8924(02)02412-1 · Cited by 183
Self-citationA Deletion in the Gene Encoding the CD45 Antigen in a Patient with SCID
Tchilian, E. Z., Wallace, D. L., Wells, R. S., Flower, D. R., Morgan, G., & Beverley, P. C. L. (2001) · The Journal of Immunology · doi:10.4049/jimmunol.166.2.1308 · Cited by 175
A Unique Carbohydrate Binding Domain Targets the Lafora Disease Phosphatase to Glycogen
Wang, J., Stuckey, J. A., Wishart, M. J., & Dixon, J. E. (2002) · Journal of Biological Chemistry · doi:10.1074/jbc.c100686200 · Cited by 168
Self-citationTodd, J. L., Tanner, K. G., & Denu, J. M. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.19.13271 · Cited by 156
Crystal Structure of a Phosphoinositide Phosphatase, MTMR2
Begley, M. J., Taylor, G. S., Kim, S., Veine, D. M., Dixon, J. E., & Stuckey, J. A. (2003) · Molecular Cell · doi:10.1016/s1097-2765(03)00486-6 · Cited by 152
Self-citationProtein phosphatases and the regulation of MAP kinase activity
Keyse, S. M. (1998) · Seminars in Cell and Developmental Biology · doi:10.1006/scdb.1997.0219 · Cited by 151
Alonso, A., Saxena, M., Williams, S., & Mustelin, T. (2001) · Journal of Biological Chemistry · doi:10.1074/jbc.m006497200 · Cited by 149
Self-citationGathering STYX: phosphatase-like form predicts functions for unique protein-interaction domains
Wishart, M. J., & Dixon, J. E. (1998) · Trends in Biochemical Sciences · doi:10.1016/s0968-0004(98)01241-9 · Cited by 137
Self-citationExtracellular signals and scores of phosphatases: All roads lead to MAP kinase
Saxena, M., & Mustelin, T. (2000) · Seminars in Immunology · doi:10.1006/smim.2000.0219 · Cited by 128
Self-citationSpatio‐temporal analysis of gene expression during aging in Drosophila melanogaster
Seroude, L., Brummel, T., Kapahi, P., & Benzer, S. (2002) · Aging Cell · doi:10.1046/j.1474-9728.2002.00007.x · Cited by 126
Mustelin, T. (2002) · Frontiers in bioscience · doi:10.2741/a770 · Cited by 121
Self-citationWishart, M. J., Denu, J. M., Williams, J. A., & Dixon, J. E. (1995) · Journal of Biological Chemistry · doi:10.1074/jbc.270.45.26782 · Cited by 119
Self-citationTyrosine phosphorylation of VHR phosphatase by ZAP-70
Alonso, A., Rahmouni, S., Williams, S., van Stipdonk, M. J. B., Jaroszewski, L., Godzik, A., Abraham, R. T., Schoenberger, S. P., & Mustelin, T. (2002) · Nature Immunology · doi:10.1038/ni856 · Cited by 103
Self-citationDephosphorylation of human p34cdc2 kinase on both Thr‐14 and Tyr‐15 by human cdc25B phosphatase
Honda, R., Ohba, Y., Nagata, A., Okayama, H., & Yasuda, H. (1993) · FEBS Letters · doi:10.1016/0014-5793(93)80540-b · Cited by 103
Protein tyrosine phosphorylation in T cell signaling
Mustelin, T. (2002) · Frontiers in bioscience · doi:10.2741/a821 · Cited by 87
Self-citationDeshpande, T., Takagi, T., Hao, L., Buratowski, S., & Charbonneau, H. (1999) · Journal of Biological Chemistry · doi:10.1074/jbc.274.23.16590 · Cited by 74
Bult, A., Zhao, F., Dirkx, R. A., Raghunathan, A., Solimena, M., & Lombroso, P. J. (1997) · PubMed · Cited by 71
Siniossoglou, S., Hurt, E., & Pelham, H. R. B. (2000) · Journal of Biological Chemistry · doi:10.1074/jbc.m001314200 · Cited by 66
Kashio, N., Matsumoto, W., Parker, S. A., & Rothstein, D. M. (1998) · Journal of Biological Chemistry · doi:10.1074/jbc.273.50.33856 · Cited by 53
Kawasaki, E., Hutton, J. C., & Eisenbarth, G. S. (1996) · Biochemical and Biophysical Research Communications · doi:10.1006/bbrc.1996.1526 · Cited by 52
The dual-specific protein tyrosine phosphatase family
Alonso, A., Rojas, A. M., Godzik, A., & Mustelin, T. (2003) · Topics in current genetics · doi:10.1007/978-3-540-40035-6_16 · Cited by 49
Self-citationProtein tyrosine phosphorylation in T cell signaling
Mustelin, T. (2002) · Frontiers in bioscience · doi:10.2741/musteli1 · Cited by 48
Self-citationBryson, G. L. M., Massa, H. F., Trask, B. J., & Etten, R. L. V. (1995) · Genomics · doi:10.1006/geno.1995.9893 · Cited by 47
Huynh, H., Wang, X., Li, W., Bottini, N., Williams, S., Nika, K., Ishihara, H., Godzik, A., & Mustelin, T. (2003) · The Journal of Immunology · doi:10.4049/jimmunol.171.12.6661 · Cited by 45
Self-citationMolecular cloning and characterization of dullard: a novel gene required for neural development
Satow, R., Chan, T.-C., & Asashima, M. (2002) · Biochemical and Biophysical Research Communications · doi:10.1016/s0006-291x(02)00641-1 · Cited by 44
Mustelin, T. (2002) · Frontiers in bioscience · doi:10.2741/mustelin · Cited by 40
Self-citationTailor, P., Gilman, J., Williams, S., & Mustelin, T. (1999) · European Journal of Biochemistry · doi:10.1046/j.1432-1327.1999.00353.x · Cited by 28
Self-citationMeeting at Mitosis: Cell Cycle-Specific Regulation of c-Src by RPTPα
Mustelin, T., & Hunter, T. R. (2002) · Science s STKE · doi:10.1126/stke.2002.115.pe3 · Cited by 21
Self-citationYamaguchi, S., Homma, K., & Natori, S. (1999) · European Journal of Biochemistry · doi:10.1046/j.1432-1327.1999.00143.x · Cited by 17
Pagliarini, D. J., Robinson, F. L., & Dixon, J. E. (2004) · Encyclopedia of Biological Chemistry · doi:10.1016/b0-12-443710-9/00696-7 · Cited by 11
Self-citationStauffacher, C. V., & Charbonneau, H. (2000) · Humana Press eBooks · doi:10.1007/978-1-59259-032-2_19 · Cited by 8
Jonnal (2000) · doi:10.1002/1096-8628(20001204)96:6
Flagged first, then by citations
Research works printed but not linked: 3
- Alonso, 2004, VHY, a novel, myristylated, testis-restricted, dual-specific protein phosphatase related to VHX, J. Biol. Chem., in press
- Bottini, 2002, LMPTP and human disease, Arch. Immol. Ther. Exp., 50, 95
- Bult, 1997, Step, Eur. J. Cell Biol., 72, 337
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Roskoski, R. J. (2012) · Pharmacological Research · doi:10.1016/j.phrs.2012.04.005 · Cited by 1,719
Protein Posttranslational Modifications: The Chemistry of Proteome Diversifications
Walsh, C. T., Garneau‐Tsodikova, S., & Gatto, G. J. J. (2005) · Angewandte Chemie International Edition · doi:10.1002/anie.200501023 · Cited by 1,654
Serine/threonine phosphatases: mechanism through structure
Shi, Y. (2009) · Cell · doi:10.1016/j.cell.2009.10.006 · Cited by 1,488
Mechanisms of specificity in protein phosphorylation
Ubersax, J. A., & Ferrell Jr, J. E. (2007) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm2203 · Cited by 1,451
Metadata
- Authors
- Alonso, A., Sasin, J., Bottini, N., Friedberg, I., Friedberg, I., Osterman, A., Godzik, A., Hunter, T., Dixon, J., & Mustelin, T.
- Affiliations
- Sanford Burnham Prebys Medical Discovery Institute (US)
- Salk Institute for Biological Studies (US)
- University of California San Diego (US)
- Corresponding author
- Mustelin, Tomas
- ORCID
- Venue
- Cell
- Publisher
- Elsevier BV
- Published
- 2004-06
- Volume
- 117
- Issue
- 6
- Pages
- 699-711
- ISSN
- 0092-8674 (ISSN-L)
- OpenAlex
- W2043617798
- Cited by
- 1,886
- References
- 75
- Citations by year
- 2026: 34 · 2025: 30 · 2024: 63 · 2023: 62 · 2022: 56 · 2021: 78 · 2020: 67 · 2019: 77 · 2018: 69 · 2017: 95 · 2016: 67 · 2015: 97 · 2014: 110 · 2013: 133 · 2012: 118
- FWCI
- 7.71
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- www.elsevier.com/tdm/userlicense/1.0/ (tdm)
- www.elsevier.com/legal/tdmrep-license (tdm)
- www.elsevier.com/open-access/userlicense/1.0/ (vor, 3333 d)
- doi.org/10.15223/policy-017 (stm-asf)
- doi.org/10.15223/policy-037 (stm-asf)
- doi.org/10.15223/policy-012 (stm-asf)
- doi.org/10.15223/policy-029 (stm-asf)
- doi.org/10.15223/policy-004 (stm-asf)
- Locations
- Cell (publishedVersion)
- PubMed (publishedVersion)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Tyrosine Phosphatases
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Protein Kinase Regulation and GTPase Signaling
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Protease and Inhibitor Mechanisms
- Keywords
- protein tyrosine phosphatase, human genome, tyrosine phosphorylation, tyrosine kinase, enzyme structure-function, enzyme regulation, human disease
- MeSH terms
- Amino Acid Sequence, Humans, Phosphorylation, Phylogeny, Tyrosine, Signal Transduction, Genome, Human, Gene Expression Regulation, Enzymologic, Protein Tyrosine Phosphatases, Protein Structure, Tertiary
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