Densely Interconnected Transcriptional Circuits Control Cell States in Human Hematopoiesis

Cited by (949)

Items 501–600 of 949

  1. Transcription Factors and Th17 Cell Development in Experimental Autoimmune Encephalomyelitis
    Guobing Chen, M. Frances Shannon · 2013 · Critical Reviews in Immunology
  2. Understanding Th17 cells through systematic genomic analyses
    Anneli Peters, Nir Yosef · 2014 · Current Opinion in Immunology
  3. BMI1 enables extensive expansion of functional erythroblasts from human peripheral blood mononuclear cells
    Senquan Liu, Mengyao Wu, Moira M. Lancelot, Jiusheng Deng, Yongxing Gao, John D. Roback, Tong Chen, Linzhao Cheng · 2021 · Molecular Therapy
  4. Activation of innate-adaptive immune machinery by poly(I:C) exposes a therapeutic vulnerability to prevent relapse in stroma-rich colon cancer
    Corry, Shania M, McCorry, Amy MB, Lannagan, Tamsin RM, Leonard, Niamh A, Fisher, Natalie C, Byrne, Ryan M, Tsantoulis, Petros, Cortes-Lavaud, Xabier, Amirkhah, Raheleh, Redmond, Keara L et al. · 2022 · Gut
  5. Joint representation and visualization of derailed cell states with Decipher
    Achille Nazaret, Joy Linyue Fan, Vincent‐Philippe Lavallée, Cassandra Burdziak, Andrew E. Cornish, Vaidotas Kiseliovas, Robert L. Bowman, Ignas Masilionis, Jaeyoung Chun, Shira Esther Eisman et al. · 2025 · Genome biology
  6. High-throughput single-cell omics using semipermeable capsules
    Denis Baronas, Justina Žvirblytė, Simonas Norvaisis, Greta Leonavičienė, Karolis Goda, Vincenta Mikulenaite, Vytautas Kašėta, Karolis Šablauskas, Laimonas Griškevičius, Simonas Juzėnas et al. · 2025 · Science
  7. Human complete NFAT1 deficiency causes a triad of joint contractures, osteochondromas, and B-cell malignancy
    Mehul Sharma, Maggie P. Fu, Henry Y. Lu, Ashish Sharma, Bhavi P. Modi, Christina Michalski, Susan Xiaoqin Lin, Joshua Dalmann, Areesha Salman, Kate L. Del Bel et al. · 2022 · Blood
  8. GTAC enables parallel genotyping of multiple genomic loci with chromatin accessibility profiling in single cells
    Sven Turkalj, Niels Asger Jakobsen, Angus Groom, Marlen Metzner, Simone G. Riva, Eran Gur, Batchimeg Usukhbayar, Mirian Angulo Salazar, Lance D. Hentges, Gerda Mickute et al. · 2023 · Cell stem cell
  9. Linking Mechanisms of Vitamin D Signaling with Multiple Sclerosis
    Carsten Carlberg, Marcin P. Mycko · 2023 · Cells
  10. Evidence that CD36 is expressed on red blood cells and constitutes a novel blood group system of clinical importance
    Abdul Ghani Alattar, Jill R. Storry, Martin L. Olsson · 2024 · Vox Sanguinis
  11. Decoding early myelopoiesis from dynamics of core endogenous network
    Hang Su, Gaowei Wang, Ruoshi Yuan, Junqiang Wang, Ying Tang, Ping Ao, Xiaomei Zhu · 2017 · Science China Life Sciences
  12. Immuno-metabolism and adipose tissue: The key role of hematopoietic stem cells
    Béatrice Cousin, Louis Casteilla, Patrick F. Laharrague, Élodie Luche, Anne Lorsignol, Vincent Cuminetti, Jenny Paupert · 2015 · Biochimie
  13. Moving H5N1 studies into the era of systems biology
    Laurence Josset, Jennifer Tisoncik-Go, Michael G. Katze · 2013 · Virus Research
  14. A robust blood gene expression-based prognostic model for castration-resistant prostate cancer
    Li Wang, Yixuan Gong, Uma Chippada-Venkata, Matthias Michael Heck, Margitta M. Retz, Roman Nawroth, Matthew D. Galsky, Che‐Kai Tsao, Eric E. Schadt, Johann Sebastian De Bono et al. · 2015 · BMC Medicine
  15. What do we learn from the genome-wide perspective on vitamin D3?
    Carsten Carlberg · 2015 · PubMed
  16. Gene set control analysis predicts hematopoietic control mechanisms from genome-wide transcription factor binding data
    A. Joshi, Rebecca Hannah, E. Diamanti, B. Göttgens · 2013 · Experimental Hematology
  17. Single-Cell Expression Profiling and Proteomics of Primordial Germ Cells, Spermatogonial Stem Cells, Adult Germ Stem Cells, and Oocytes
    Sabine Conrad, Hossein Azizi, Thomas Skutella · 2017 · Advances in experimental medicine and biology
  18. Adrenomedullin Expression Characterizes Leukemia Stem Cells and Associates With an Inflammatory Signature in Acute Myeloid Leukemia
    Giorgia Simonetti, Davide Angeli, Elisabetta Petracci, Eugenio Fonzi, Susanna Vedovato, Alessandra A. Sperotto, Antonella Padella, Martina Ghetti, Anna Ferrari, Valentina Robustelli et al. · 2021 · Frontiers in Oncology
  19. ATG4A regulates human erythroid maturation and mitochondrial clearance
    Massiel Chavez Stolla, Andreea Reilly, Rochelle Bergantinos, Sintra Stewart, Neele Thom, Courtnee A. Clough, Rachel Wellington, Raisa B Stolitenko, Janis L. Abkowitz, Sergei R. Doulatov · 2022 · Blood Advances
  20. MYCT1 controls environmental sensing in human haematopoietic stem cells
    Júlia Aguadé-Gorgorió, Yasaman Jami‐Alahmadi, Vincenzo Calvanese, Maya S Kardouh, Iman Fares, Haley E. Johnson, Valerie K. Rezek, Feiyang Ma, Mattias Magnusson, Yanling Wang et al. · 2024 · Nature
  21. Molecular and functional characterization of early human hematopoiesis
    Elisa Laurenti, John Edgar Dick · 2012 · Annals of the New York Academy of Sciences
  22. Genomics, “Discovery Science,” Systems Biology, and Causal Explanation: What Really Works?
    Eric H. Davidson · 2015 · Perspectives in biology and medicine
  23. Multilayer regulation of CD4 T cell subset differentiation in the era of single cell genomics
    Waradon Sungnak, Chao Wang, Vijay Kumar Kuchroo · 2019 · Advances in immunology
  24. Mebendazole for Differentiation Therapy of Acute Myeloid Leukemia Identified by a Lineage Maturation Index
    Yulin Li, Danièl Thomas, Anja Deutzmann, Ravindra Majeti, Dean W. Felsher, David L. Dill · 2019 · Scientific Reports
  25. Horizontal meta-analysis identifies common deregulated genes across AML subgroups providing a robust prognostic signature
    Ali Nehme, Hassan Dakik, Frédéric Picou, Meyling Hua-Chen Cheok, Claude Preudhomme, Hervé Dombret, Juliette Lambert, Emmanuel Gyan, Arnaud Pigneux, Christian Récher et al. · 2020 · Blood Advances
  26. Characterization of NADPH Oxidase Expression and Activity in Acute Myeloid Leukemia Cell Lines: A Correlation with the Differentiation Status
    Hassan Dakik, Maya El Dor, Joan Leclerc, Farah Kouzi, Ali Nehme, Margaux Deynoux, Christelle Debeissat, Georges Khamis, Elfi Ducrocq, Aida Ibrik et al. · 2021 · Antioxidants
  27. The Hematopoietic TALE-Code Shows Normal Activity of IRX1 in Myeloid Progenitors and Reveals Ectopic Expression of IRX3 and IRX5 in Acute Myeloid Leukemia
    Stefan Nagel, Claudia Pommerenke, Corinna Meyer, Roderick A.F. MacLeod · 2022 · International Journal of Molecular Sciences
  28. Identification of an Epi-metabolic dependency on EHMT2/G9a in T-cell acute lymphoblastic leukemia
    Anna Montanaro, Samuel Kitara, Elisa Cerretani, Matteo Marchesini, Chiara Rompietti, Luca Pagliaro, Andrea Gherli, Angela H. Su, Maria Laura Minchillo, Mariafrancesca Caputi et al. · 2022 · Cell Death and Disease
  29. Loss of G0/G1 switch gene 2 (G0S2) promotes disease progression and drug resistance in chronic myeloid leukaemia (CML) by disrupting glycerophospholipid metabolism
    Mayra Alejandra Gonzalez, Idaly Maria Olivas, Alfonso Enrique Bencomo-Alvarez, Andres J. Rubio, Christian Barreto‐Vargas, José Luis García López, Sara K. Dang, Jonathan P. Solecki, Emily B. McCall, Gonzalo E. Astudillo et al. · 2022 · Clinical and Translational Medicine
  30. Machine Learning–Directed Conversion of Glioblastoma Cells to Dendritic Cell–Like Antigen-Presenting Cells as Cancer Immunotherapy
    Tianyi Liu, Dan Jin, Son B. Le, Dongjiang Chen, Mathew Sebastian, Alberto Riva, Ruixuan Liu, David Dinh Tran · 2024 · Cancer Immunology Research
  31. Identification of Tumor‐Specific Surface Proteins Enables Quantification of Extracellular Vesicle Subtypes for Early Detection of Pancreatic Ductal Adenocarcinoma
    Chen Zhao, Zhili Wang, Hyo Yong Kim, Hui Kong, Junseok Lee, Jacqueline Ziqian Yang, Anmin Wang, Ryan Y. Zhang, Yong Ju, Jina Kim et al. · 2025 · Advanced Science
  32. Low-Rank Regularization for Learning Gene Expression Programs
    Gui–Bo Ye, Mengfan Tang, Jian-feng Cai A, Qing Hua Nie, Xiaohui S. Xie · 2013 · PLoS ONE
  33. High-Resolution Expression Profiling of Peripheral Blood CD8+ Cells in Patients with Multiple Sclerosis Displays Fingolimod-Induced Immune Cell Redistribution
    Luisa Roch, Michael Hecker, Jörg Friess, Ines Charlotte Angerer, Dirk Koczan, Brit Fitzner, Ina Schröder, Kristin Flechtner, Hans‐Jürgen Thiesen, Stefanie Meister et al. · 2016 · Molecular Neurobiology
  34. A regulatory function of long non-coding RNAs in red blood cell development
    Klaudia Kulczyńska-Figurny, Mirosława Siatecka · 2016 · Acta Biochimica Polonica
  35. Roles of the RUNX1 Enhancer in Normal Hematopoiesis and Leukemogenesis
    Wei‐Siang Liau, Phuong Cao Thi Ngoc, Takaomi Sanda · 2017 · Advances in experimental medicine and biology
  36. The haematopoietic stem cell niche: a new player in cardiovascular disease?
    Annas Al‐Sharea, Man K.S. Lee, Louise E. Purton, Edwin D. Hawkins, Andrew James Murphy · 2018 · Cardiovascular Research
  37. MNDA controls the expression of MCL-1 and BCL-2 in chronic lymphocytic leukemia cells
    Stefania Bottardi, Romain Guièze, Vincent Bourgoin, Nasser Fotouhi‐Ardakani, Aurore Dougé, Anaïs Darracq, Yahia Abdelali Lakehal, Marc Gabriel Berger, Luigina R. Mollica, Jacques‐Olivier Bay et al. · 2020 · Experimental Hematology
  38. The homeobox gene DLX4 regulates erythro-megakaryocytic differentiation by stimulating IL-1/NF-κB signaling
    Bon Q. Trinh, Nicolas Barengo, Sang Bae Kim, Ju‐Seog Lee, Patrick A. Zweidler‐McKay, Honami Naora · 2015 · Journal of Cell Science
  39. The analysis of novel distal Cebpa enhancers and silencers using a transcriptional model reveals the complex regulatory logic of hematopoietic lineage specification
    Eric Bertolino, John Reinitz, Manu · 2016 · Developmental Biology
  40. The Biodiversity Cell Atlas: mapping the tree of life at cellular resolution
    Arnau Sebé-Pedrós, Amos Tanay, Mara Lawniczak, Detlev Arendt, Stein Aerts, John M. Archibald, Maria Ina Arnone, Mark Blaxter, Phillip A. Cleves, Susana M. Coelho et al. · 2025 · Nature
  41. Impact of Epigenetics on Complications of Fanconi Anemia: The Role of Vitamin D-Modulated Immunity
    Eunike Velleuer, Carsten Carlberg · 2020 · Nutrients
  42. CAPN2-responsive mesoporous silica nanoparticles: A promising nanocarrier for targeted therapy of pancreatic cancer
    Etienne J. Slapak, Mouad el Mandili, Marieke S. ten Brink, Alexander Kros, Maarten F. Bijlsma, C. Arnold Spek · 2024 · Cancer Letters
  43. Proteinase-Activated Receptor 1 (PAR1) Regulates Leukemic Stem Cell Functions
    Nicole Bäumer, Annika Krause, Gabriele Köhler, Stephanie Lettermann, Georg Evers, Antje Hascher, Sebastian Bäumer, Wolfgang E. Berdel, Carsten Müller‐Tidow, Lara Tickenbrock · 2014 · PLoS ONE
  44. Inferring Cell Differentiation Processes Based on Phylogenetic Analysis of Genome-Wide Epigenetic Information: Hematopoiesis as a Model Case
    Kanako O. Koyanagi · 2015 · Genome Biology and Evolution
  45. Genome‐wide association study follow‐up identifies cyclin A2 as a regulator of the transition through cytokinesis during terminal erythropoiesis
    Leif S. Ludwig, Hyunjii Cho, Aoi Wakabayashi, Jennifer C. Eng, Jacob C. Ulirsch, Mark D. Fleming, Harvey F. Lodish, Vijay G. Sankaran · 2015 · American Journal of Hematology
  46. A curated compendium of monocyte transcriptome datasets of relevance to human monocyte immunobiology research
    Darawan Rinchai, Sabri Boughorbel, Scott Presnell, Charlie Quinn, Damien Chaussabel · 2016 · F1000Research
  47. Mechanisms and consequences of constitutive activation of integrin-linked kinase in acute myeloid leukemia
    Mohammed Alasseiri, Afsar U. Ahmed, Bryan R.G. Williams · 2018 · Cytokine & Growth Factor Reviews
  48. Maintenance of human haematopoietic stem and progenitor cells in vitro using a chemical cocktail
    Mengmeng Jiang, Haide Chen, Shujing Lai, Renying Wang, Yunfei Qiu, Fang Ye, Lijiang Fei, Huiyu Sun, Yang Xu, Xinyi Jiang et al. · 2018 · Cell Discovery
  49. Knowledge-based classification of fine-grained immune cell types in single-cell RNA-Seq data
    Xuan Liu, Sara J.C. Gosline, Lance T. Pflieger, Pierre Wallet, Archana Iyer, Justin Guinney, Andrea H. Bild, Jeffrey T. Chang · 2021 · Briefings in Bioinformatics
  50. Global characterization of megakaryocytes in bone marrow, peripheral blood, and cord blood by single-cell RNA sequencing
    Weilong Zhang, Changjian Yan, Xiaoni Liu, Ping Yang, Jing Wang, Yingtong Chen, Weiyou Liu, Shaoxiang Li, Xiuru Zhang, Gehong Dong et al. · 2022 · Cancer Gene Therapy
  51. Glatiramer acetate treatment effects on gene expression in monocytes of multiple sclerosis patients
    Madhan Thamilarasan, Michael Hecker, Robert Hermann Goertsches, Brigitte Katrin Paap, Ina Schröder, Dirk Koczan, Hans‐Jürgen Thiesen, Uwe Klaus Zettl · 2013 · Journal of Neuroinflammation
  52. Circulating Tumor Cell–Based Messenger RNA Scoring System for Prognostication of Hepatocellular Carcinoma: Translating Tissue‐Based Messenger RNA Profiling Into a Noninvasive Setting
    Yi‐Te Lee, Na Sun, Minhyung Kim, Jasmine Jiemei Wang, Benjamin V. Tran, Ryan Y. Zhang, Dongping Qi, Ceng Zhang, Pin‐Jung Chen, Saeed Sadeghi et al. · 2021 · Liver Transplantation
  53. Systems-level analysis of peripheral blood gene expression in dementia patients reveals an innate immune response shared across multiple disorders
    Daniel C. Nachun, EM Ramos, A Karydas, D Dokuru, F Gao, Z Yang, V Van Berlo, R Sears, J Kramer, Adam L. Boxer et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  54. Therapeutic targeting in pediatric acute myeloid leukemia with aberrant HOX/MEIS1 expression
    Kristian Løvvik Juul-Dam, Neerav Narendra Shukla, Todd M. Cooper, Branko Cuglievan, Olaf T Heidenreich, Edward Anders Kolb, Milad Rasouli, Henrik Hasle, Christian Michel Zwaan · 2023 · European Journal of Medical Genetics
  55. MNDA, a PYHIN factor involved in transcriptional regulation and apoptosis control in leukocytes
    Stefania Bottardi, Taylorjade Layne, Ailyn C. Ramòn, Norreen Quansah, Hugo Würtele, El Bachir Affar, Éric Milot · 2024 · Frontiers in Immunology
  56. Epigenetic alterations affecting hematopoietic regulatory networks as drivers of mixed myeloid/lymphoid leukemia
    Roger Mulet‐Lazaro, Stanley van Herk, Margit Nuetzel, Anikó Sijs‐Szabó, Noèlia Díaz, Katherine Kelly, Claudia A. J. Erpelinck-Verschueren, Lucia Schwarzfischer, Hanna Stanewsky, Ute Ackermann et al. · 2024 · Nature Communications
  57. In vivo vitamin D target genes interconnect key signaling pathways of innate immunity
    Julia Jarosławska, Ranjini Ghosh Dastidar, Carsten Carlberg · 2024 · PLoS ONE
  58. Pathprinting: An integrative approach to understand the functional basis of disease
    Gabriel M. Altschuler, Oliver Hofmann, Irina Kalatskaya, Rebecca Payne, Shannan J. Ho Sui, Uma Saxena, Andrei V. Krivtsov, Scott A. Armstrong, Tianxi Cai, Lincoln David Stein et al. · 2013 · Genome Medicine
  59. Limited Mitochondrial Activity Coupled With Strong Expression of CD34, CD90 and EPCR Determines the Functional Fitness of ex vivo Expanded Human Hematopoietic Stem Cells
    Luena Papa, Mansour Djedaini, Tiphaine C. Martin, Mahtab Zangui, Kristin G. Beaumont, Robert Sebra, Ramon E. Parsons, Christoph Schaniel, Ronald Hoffman · 2020 · Frontiers in Cell and Developmental Biology
  60. Decoding dendritic cell function through module and network analysis
    Gaurav Shankar Pandey, Ariella T. Cohain, Jennifer C. Miller, Miriam Mérad · 2012 · Journal of Immunological Methods
  61. Visualising the Cross-Level Relationships between Pathological and Physiological Processes and Gene Expression: Analyses of Haematological Diseases
    Masahiro Ono, Reiko J. Tanaka, Manabu Kano, Toshio Sugiman · 2013 · PLoS ONE
  62. Characterization and Classification of Stem Cells
    Andreas Bosio, Ute Bissels, Stefan Miltenyi · 2010 · Springer eBooks
  63. Extracellular vesicle digital scoring assay for assessment of treatment responses in hepatocellular carcinoma patients
    Chen Zhao, Yi‐Te Lee, Andrew Melehy, Minhyung Kim, Jianwei Yang, Ceng Zhang, Jina Kim, Ryan Y. Zhang, Junseok Lee, Hyoyong Kim et al. · 2025 · Journal of Experimental & Clinical Cancer Research
  64. Computational frameworks for enhanced extracellular vesicle biomarker discovery
    Jina Kim, Ju Dong Yang, Vatche Garen Agopian, Yazhen Zhu, Hsian‐Rong Tseng, Sungyong You · 2026 · Experimental & Molecular Medicine
  65. MIR retrotransposons link the epigenome and the transcriptome of coding genes in acute myeloid leukemia
    Aristeidis G. Telonis, Qin Yang, Hsuan-Ting Huang, María E. Figueroa · 2022 · Nature Communications
  66. Association of Levels of Fasting Glucose and Insulin With Rare Variants at the Chromosome 11p11.2- MADD Locus
    Belinda K. Cornes, Jennifer A. Brody, Naghmeh Nikpoor, Alanna C. Morrison, Huan Chu Pham Dang, Byung Soo Ahn, Shuai Wang, Marco Dauriz, Joshua I. Barzilay, Josée Dupuis et al. · 2014 · Circulation Cardiovascular Genetics
  67. JAK1 somatic mutation in a myeloproliferative neoplasm
    Suzanne O. Arulogun, Hock-Lai Choong, Debbie Taylor, Paula Ambrosoli, Graham William Magor, Ian Irving, Tee Beng Keng, Andrew Charles Perkins · 2017 · Haematologica
  68. Isolation of RNA and the Synthesis and Amplification of cDNA from Antigen-Specific T Cells for Genome-Wide Expression Analysis
    R. Anthony Barnitz, Sabrina Imam, Kathleen B. Yates, W. Nicholas Haining · 2013 · Methods in molecular biology
  69. Loss of ASXL1 triggers an apoptotic response in human hematopoietic stem and progenitor cells
    Susan Hilgendorf, Hendrik Folkerts, Jan Jacob Schuringa, Edo Vellenga · 2016 · Experimental Hematology
  70. Characterization of TRKA signaling in acute myeloid leukemia
    Shelley M. Herbrich, Sankaranarayanan Kannan, Riitta M. Nolo, Marisa J.L. Aitken, Joya Chandra, Patrick A. Zweidler‐McKay · 2018 · Oncotarget
  71. Gene target discovery with network analysis in Toxoplasma gondii
    Andrés M. Alonso, María M. Corvi, Luis Anibal Diambra · 2019 · Scientific Reports
  72. Gene Regulatory Networks
    Martha L. Bulyk, Albertha J.M. Walhout · 2012 · Elsevier eBooks
  73. The DEK Oncoprotein Is a Critical Component of the EKLF/KLF1 Enhancer in Erythroid Cells
    Felix Lohmann, Mohan Dangeti, Shefali Soni, Xiaoyong Chen, Antanas Planutis, Margaret H. Baron, Kyunghee Choi, James J. Bieker · 2015 · Molecular and Cellular Biology
  74. Single-cell epigenomics maps the continuous regulatory landscape of human hematopoietic differentiation
    Jason Daniel Buenrostro, M. Ryan Corces, Beijing Wu, Alicia N. Schep, Caleb A. Lareau, Ravindra Majeti, Howard Y. Chang, William James Greenleaf · 2017 · bioRxiv (Cold Spring Harbor Laboratory)
  75. Gene Expression Deconvolution for Uncovering Molecular Signatures in Response to Therapy in Juvenile Idiopathic Arthritis
    Ang Cui, Gerald Quon, Alan M Rosenberg, Rae S. M. Yeung, Quaid Morris · 2016 · PLoS ONE
  76. Integration of Stemness Gene Signatures Reveals Core Functional Modules of Stem Cells and Potential Novel Stemness Genes
    Tânia Barata, Isabel Duarte, Matthias E. Futschik · 2023 · Genes
  77. Cell-Type Specific Determinants of NRAMP1 Expression in Professional Phagocytes
    Mathieu F. Cellier · 2013 · Biology
  78. Adult-repopulating lymphoid potential of yolk sac blood vessels is not confined to arterial endothelial cells
    Chaojie Wang, Yandong Gong, Anbang Wei, Tao Huang, Siyuan Hou, Junjie Du, Zongcheng Li, Junliang Wang, Bing Liu, Yu Lan · 2021 · Science China Life Sciences
  79. FAT1 expression in T-cell acute lymphoblastic leukemia (T-ALL) modulates proliferation and WNT signaling
    Sven Liebig, Martín Neumann, Patrícia M. A. Silva, Jutta Ortiz-Tánchez, Veronika Schulze, Konstandina Isaakidis, Cornelia Schlee, Michael P. Schroeder, Thomas Beder, Luc G.T. Morris et al. · 2023 · Scientific Reports
  80. ELMO1 Is Upregulated in AML CD34+ Stem/Progenitor Cells, Mediates Chemotaxis and Predicts Poor Prognosis in Normal Karyotype AML
    Marta Ewa Capala, Edo Vellenga, Jan Jacob Schuringa · 2014 · PLoS ONE
  81. Cell division curtails helper phenotype plasticity and expedites helper T‐cell differentiation
    Henk‐Jan van den Ham, Rob J. de Boer · 2012 · Immunology and Cell Biology
  82. TESTIN Induces Rapid Death and Suppresses Proliferation in Childhood B Acute Lymphoblastic Leukaemia Cells
    Robert J. Weeks, Jackie L. Ludgate, Gwenn Le Mée, Ian M. Morison · 2016 · PLoS ONE
  83. Development and Characterization of a Fixed Repertoire of Blood Transcriptome Modules Based on Co-expression Patterns Across Immunological States
    Matthew C. Altman, Darawan Rinchai, Nicole E. Baldwin, Mohammed Toufiq, Elizabeth Whalen, Mathieu Garand, Basirudeen Syed Ahamed Kabeer, Mohamed Alfaki, Scott Presnell, Prasong Khaenam et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  84. Long non-coding RNA gene regulation and trait associations across human tissues
    Olivia M. de Goede, Nicole M. Ferraro, Daniel C. Nachun, Abhiram S. Rao, François Aguet, Alvaro Barbeira, Stephane E. Castel, Sarah Kim-Hellmuth, Yongjin Park, A. J. Scott et al. · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
  85. Budding off: bringing functional genomics to Candida albicans
    Anderson, Matthew Z., Bennett, Richard J. · 2016 · Briefings in Functional Genomics
  86. The regulatory control of Cebpa enhancers and silencers in the myeloid and red-blood cell lineages
    Andrea Repele, Shawn Krueger, Tapas Bhattacharyya, Michelle Y. Tuineau, Manu · 2019 · PLoS ONE
  87. An efficient, not-only-linear correlation coefficient based on clustering
    Milton Pividori, Marylyn DeRiggi Ritchie, Diego Humberto Milone, Casey S. Greene · 2024 · Cell Systems
  88. Costs in Different States of Breast Cancer
    Eija Roine, Niilo Färkkilä, Harri Sintonen, Kimmo Taari, Risto Paavo Roine, Tiina Saarto · 2018 · Anticancer Research
  89. Complex genetic dependencies among growth and neurological phenotypes in healthy children: Towards deciphering developmental mechanisms
    Lisa Uechi, Mahjoubeh Jalali Sefid Dashti, Jayson D. Wilbur, Jonathan L French, N. L. Jumbe, Michael Joseph Meaney, Peter David Gluckman, Neerja Karnani, Nikita A. Sakhanenko, David J. Galas et al. · 2020 · PLoS ONE
  90. Vitamin D and Systems Biology
    Shahid Hussain, Clayton Clopton Yates, Moray J. Campbell · 2022 · Nutrients
  91. Heterogeneous nuclear ribonucleoprotein K is overexpressed in acute myeloid leukemia and causes myeloproliferation in mice via altered Runx1 splicing
    Marisa J.L. Aitken, Prerna Malaney, Xiaorui Zhang, Shelley M. Herbrich, Lauren Chan, Oscar Benitez, Ashley Rodriguez, Huaxian Ma, Rodrigo Omar Jacamo, Ruizhi Duan et al. · 2022 · NAR Cancer
  92. Unveiling the complexity of transcription factor networks in hematopoietic stem cells: implications for cell therapy and hematological malignancies
    Aissa Benyoucef, Jody J. Haigh, Marjorie Brand · 2023 · Frontiers in Oncology
  93. An Evolving Model of Hematopoietic Stem Cell Functional Identity
    M. William Lensch · 2012 · Stem Cell Reviews and Reports
  94. Bioinformatic approaches to interrogating vitamin D receptor signaling
    Moray J. Campbell · 2017 · Molecular and Cellular Endocrinology
  95. Expression of a specific extracellular matrix signature is a favorable prognostic factor in acute myeloid leukemia
    Valerio Izzi, Juho Lakkala, Raman Devarajan, Eeva‐Riitta Savolainen, Pirjo Koistinen, Ritva Heljäsvaara, Taina A. Pihlajaniemi · 2017 · Leukemia Research Reports
  96. Systems Biology Approach to Model the Life Cycle of Trypanosoma cruzi
    Alejandra Carrea, Luis Anibal Diambra · 2016 · PLoS ONE
  97. Transcription factor co-localization patterns affect human cell type-specific gene expression
    Dennis Y.Q. Wang, Augusto Rendon, Willem Hendrik Ouwehand, Lorenz Wernisch · 2012 · BMC Genomics
  98. Inferring epigenetic and transcriptional regulation during blood cell development with a mixture of sparse linear models
    Thais Gaudencio do Rego, Helge Gottfried Roider, Francisco A. T. de Carvalho, Ivan G. Costa · 2012 · Computer applications in the biosciences
  99. Oncogenes and the Origins of Leukemias
    Geoffrey Brown · 2022 · International Journal of Molecular Sciences
  100. Cohesin Subunit RAD21 Regulates the Differentiation and Self-Renewal of Hematopoietic Stem and Progenitor Cells
    Praveen Kumar, Nenggang Zhang, John Lee, Haizi Cheng, Kristen J. Kurtz, Shannon E Conneely, Rajkumar Sasidharan, Rachel E. Rau, Debananda Pati · 2023 · Stem Cells