Dynamic Readers for 5-(Hydroxy)Methylcytosine and Its Oxidized Derivatives

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Items 101–200 of 979

  1. Bisulfite-free, base-resolution analysis of 5-formylcytosine at the genome scale
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  2. Potential functional roles of DNA demethylation intermediates
    Song, Chun-Xiao, He, Chuan · 2013 · Trends in Biochemical Sciences
  3. Molecular basis for 5-carboxycytosine recognition by RNA polymerase II elongation complex
    Lanfeng Wang, Yu Zhou, Liang Xu, Rui Xiao, Xingyu Lu, Liang Chen, Jenny P C Chong, Hairi Li, Chuan He, Xiang‐Dong Fu et al. · 2015 · Nature
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    Xiaofei Zhang, Arne H. Smits, Gabriëlle B. A. van Tilburg, Pascal W.T.C. Jansen, Matthew M. Makowski, Huib Ovaa, Michiel Vermeulen · 2017 · Molecular Cell
  5. The histone deacetylase SIRT6 controls embryonic stem cell fate via TET-mediated production of 5-hydroxymethylcytosine
    Jean‐Pierre Etchegaray, Lukas Chávez, Yun Huang, Kenneth N. Ross, Jiho Choi, Bárbara Martínez-Pastor, Ryan M. Walsh, Cesar Sommer, Matthias Lienhard, Adrianne D. Gladden et al. · 2015 · Nature Cell Biology
  6. DNA Modifications: Function and Applications in Normal and Disease States
    Vichithra R. B. Liyanage, Jessica S. Jarmasz, Nanditha Murugeshan, Marc R. Del Bigio, Mojgan Rastegar, James Davie · 2014 · Biology
  7. Nucleosome repositioning links DNA (de)methylation and differential CTCF binding during stem cell development
    Vladimir B. Teif, Daria A. Beshnova, Yevhen Vainshtein, Caroline Marth, Jan‐Philipp Mallm, Thomas Höfer, Karsten Rippe · 2014 · Genome Research
  8. ChromID identifies the protein interactome at chromatin marks
    Rodrigo Villaseñor, Ramon Pfaendler, Christina M. Ambrosi, Stefan Butz, Sara Giuliani, Elana Bryan, Thomas W. Sheahan, Annika L. Gable, Nina Schmolka, Massimiliano Manzo et al. · 2020 · Nature Biotechnology
  9. Sensitive and Simultaneous Determination of 5-Methylcytosine and Its Oxidation Products in Genomic DNA by Chemical Derivatization Coupled with Liquid Chromatography-Tandem Mass Spectrometry Analysis
    Yang Tang, Shu-Jian Zheng, Chu‐Bo Qi, Yu‐Qi Feng, Bi‐Feng Yuan · 2015 · Analytical Chemistry
  10. 5-Hydroxymethylcytosine Plays a Critical Role in Glioblastomagenesis by Recruiting the CHTOP-Methylosome Complex
    Hiroki Takai, Koji Masuda, Tomohiro Sato, Yuriko Sakaguchi, Takeo Suzuki, Tsutomu Suzuki, Ryo Koyama‐Nasu, Yukiko Nasu‐Nishimura, Yuki Katou, Haruo Ogawa et al. · 2014 · Cell Reports
  11. Whole genome DNA methylation: beyond genes silencing
    Roberto Tirado-Magallanes, Khadija Rebbani, Ricky Lim, Sriharsa Pradhan, Touati Benoukraf · 2016 · Oncotarget
  12. TET3 Is Recruited by REST for Context-Specific Hydroxymethylation and Induction of Gene Expression
    Perera, Arshan, Eisen, David, Wagner, Mirko, Laube, Silvia K., Künzel, Andrea F., Koch, Susanne, Steinbacher, Jessica, Schulze, Elisabeth, Splith, Victoria, Mittermeier, Nana et al. · 2015 · Cell Reports
  13. 8-Oxo-7,8-dihydroguanine, friend and foe: Epigenetic-like regulator versus initiator of mutagenesis
    Aaron M. Fleming, Cynthia J. Burrows · 2017 · DNA repair
  14. Novel genetic and epigenetic factors of importance for inter-individual differences in drug disposition, response and toxicity
    Volker Martin Lauschke, Yitian Zhou, Magnus Ingelman‐Sundberg · 2019 · Pharmacology & Therapeutics
  15. Epigenetic Regulations in Neuropsychiatric Disorders
    Janise N. Kuehner, Emily C. Bruggeman, Zhexing Wen, Bing Yao · 2019 · Frontiers in Genetics
  16. PRDM14 promotes active DNA demethylation through the Ten-eleven translocation (TET)-mediated base excision repair pathway in embryonic stem cells
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  17. Phosphorylation of TET Proteins Is Regulated via O-GlcNAcylation by the O-Linked N-Acetylglucosamine Transferase (OGT)
    Christina Bauer, Klaus Göbel, Nagarjuna Nagaraj, Christian Colantuoni, Mengxi Wang, Udo Müller, Elisabeth Kremmer, Andrea Rottach, Heinrich Leonhardt · 2015 · Journal of Biological Chemistry
  18. Computational identification of novel biochemical systems involved in oxidation, glycosylation and other complex modifications of bases in DNA
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  19. Loss of 5-hydroxymethylcytosine in cancer: Cause or consequence?
    Gabriella Ficz, John G. Gribben · 2014 · Genomics
  20. The Epigenetics of Epilepsy and Its Progression
    Rebecca M. Hauser, David Clifford Henshall, Farah D. Lubin · 2017 · The Neuroscientist
  21. A unique role for DNA (hydroxy)methylation in epigenetic regulation of human inhibitory neurons
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  22. Epigenetic control of gene regulation during development and disease: A view from the retina
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  25. 5-Hydroxymethylcytosine: A stable or transient DNA modification?
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  26. Cooperative Action between SALL4A and TET Proteins in Stepwise Oxidation of 5-Methylcytosine
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  27. Epigenetic inactivation of the CpG demethylase TET1 as a DNA methylation feedback loop in human cancers
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  30. Retention of paternal DNA methylome in the developing zebrafish germline
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  31. Krüppel-Like Factor 4 Regulation of Cholesterol-25-Hydroxylase and Liver X Receptor Mitigates Atherosclerosis Susceptibility
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  32. TET2 Function in Hematopoietic Malignancies, Immune Regulation, and DNA Repair
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  33. DNA Methylation Readers and Cancer: Mechanistic and Therapeutic Applications
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  34. Integrative Proteomic Profiling Reveals PRC2-Dependent Epigenetic Crosstalk Maintains Ground-State Pluripotency
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  35. Alteration of genic 5-hydroxymethylcytosine patterning in olfactory neurons correlates with changes in gene expression and cell identity
    Bradley M. Colquitt, William E. Allen, Gilad Barnea, Stavros Lomvardas · 2013 · Proceedings of the National Academy of Sciences
  36. Playing TETris with DNA modifications
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  37. Mapping and elucidating the function of modified bases in DNA
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  38. APOBEC3B-Mediated Cytidine Deamination Is Required for Estrogen Receptor Action in Breast Cancer
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  39. 5-hydroxymethylcytosine in cancer: significance in diagnosis and therapy
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  40. Role of glutathione in the regulation of epigenetic mechanisms in disease
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  41. Epigenetic regulator CXXC5 recruits DNA demethylase Tet2 to regulate TLR7/9-elicited IFN response in pDCs
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  42. Zinc Fingers, TALEs, and CRISPR Systems: A Comparison of Tools for Epigenome Editing
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  43. MBD3 Localizes at Promoters, Gene Bodies and Enhancers of Active Genes
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  44. TET2 as an epigenetic master regulator for normal and malignant hematopoiesis
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  45. Distinct and overlapping control of 5-methylcytosine and 5-hydroxymethylcytosine by the TET proteins in human cancer cells
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  46. Neighboring Genes Show Correlated Evolution in Gene Expression
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  48. ZMYND8 Co-localizes with NuRD on Target Genes and Regulates Poly(ADP-Ribose)-Dependent Recruitment of GATAD2A/NuRD to Sites of DNA Damage
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  51. Global DNA 5‐Hydroxymethylcytosine and 5‐Formylcytosine Contents Are Decreased in the Early Stage of Hepatocellular Carcinoma
    Jiao Liu, Jinhua Jiang, Jiezhen Mo, Dan Liu, Dan Cao, Hailin Wang, Yufei He, Hongyang Wang · 2018 · Hepatology
  52. Epigenetic memory: The Lamarckian brain
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  53. Structural Basis for Hydroxymethylcytosine Recognition by the SRA Domain of UHRF2
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  54. DNA methylation in Parkinson's disease
    Wüllner, Ullrich, Kaut, Oliver, deBoni, Laura, Piston, Dominik, Schmitt, Ina · 2016 · Journal of Neurochemistry
  55. SETDB1-Mediated Cell Fate Transition between 2C-Like and Pluripotent States
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  56. Epigenetic Regulation of Genomic Stability by Vitamin C
    John P Brabson, Tiffany E. Leesang, Sofia Mohammad, Luisa Cimmino · 2021 · Frontiers in Genetics
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    Klug, Maja, Schmidhofer, Sandra, Gebhard, Claudia, Andreesen, Reinhard, Rehli, Michael · 2013 · Genome Biology
  58. The chromatin basis of neurodevelopmental disorders: Rethinking dysfunction along the molecular and temporal axes
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  62. The emerging role of 5-hydroxymethylcytosine in neurodegenerative diseases
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  63. TET‐catalyzed oxidation of intragenic 5‐methylcytosine regulates CTCF‐dependent alternative splicing
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