A neural algorithm for the non-uniform and adaptive sampling of biomedical data
Open accessAbstract
BACKGROUND AND OBJECTIVE Body sensors are finding increasing applications in the self-monitoring for health-care and in the remote surveillance of sensitive people. The physiological data to be sampled can be non-stationary, with bursts of high amplitude and frequency content providing most information. Such data could be sampled efficiently with a non-uniform schedule that increases the sampling rate only during activity bursts. METHODS A real time and adaptive algorithm is proposed to select the sampling rate, in order to reduce the number of measured samples, but still recording the main information. The algorithm is based on a neural network which predicts the subsequent samples and their uncertainties, requiring a measurement only when the risk of the prediction is larger than a selectable threshold. RESULTS Four examples of application to biomedical data are discussed: electromyogram, electrocardiogram, electroencephalogram, and body acceleration. Sampling rates are reduced under the Nyquist limit, still preserving an accurate representation of the data and of their power spectral densities (PSD). For example, sampling at 60% of the Nyquist frequency, the percentage average rectified errors in estimating the signals are on the order of 10% and the PSD is fairly represented, until the highest frequencies. The method outperforms both uniform sampling and compressive sensing applied to the same data. CONCLUSION The discussed method allows to go beyond Nyquist limit, still preserving the information content of non-stationary biomedical signals. It could find applications in body sensor networks to lower the number of wireless communications (saving sensor power) and to reduce the occupation of memory.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Wearable biosensors face many fundamental challenges and technological gaps related to the scope, validation, stability and accuracy, along with power, communication and security/privacy issues.
“Wearable biosensors face many fundamental challenges and technological gaps related to the scope, validation, stability and accuracy, along with power (Box 1)1,42,157-167, communication (Box 2)1,168 and security/privacy issues (Box 3)1,169-172”
From Wearable biosensors for healthcare monitoring (2019) · cites this paper as [161]
Cites
Neural Networks: A Comprehensive Foundation
Haykin, S. (1998) · Cited by 30,070 · see citing works
Candes, E. J., Romberg, J., & Tao, T. (2006) · IEEE Transactions on Information Theory · doi:10.1109/tit.2005.862083 · Cited by 15,639 · see citing works
A review of wearable sensors and systems with application in rehabilitation
Patel, S., Park, H., Bonato, P., Chan, L., & Rodgers, M. (2012) · Journal of NeuroEngineering and Rehabilitation · doi:10.1186/1743-0003-9-21 · Cited by 2,396 · see citing works
Nonlinear Time Series Analysis
Kantz, H., & Schreiber, T. (2012) · SpringerReference · doi:10.1007/springerreference_205493 · Cited by 1,997 · see citing works
Practical method for determining the minimum embedding dimension of a scalar time series
Cao, L. (1997) · Physica D Nonlinear Phenomena · doi:10.1016/s0167-2789(97)00118-8 · Cited by 1,704 · see citing works
Muro, A., García-Zapirain, B., & Zorrilla, A. M. (2014) · Sensors · doi:10.3390/s140203362 · Cited by 1,181 · see citing works
Nonlinear Time Series Analysis
Hafner, C. M. (1998) · Contributions to economics · doi:10.1007/978-3-662-12605-9_3 · Cited by 1,173 · see citing works
A survey on wireless body area networks
Latré, B., Braem, B., Moerman, I., Blondia, C. L., & Demeester, P. (2010) · Wireless Networks · doi:10.1007/s11276-010-0252-4 · Cited by 1,100 · see citing works
Anguita, D., Ghio, A., Oneto, L., Parra, X., & Reyes-Ortiz, J. L. (2012) · Lecture notes in computer science · doi:10.1007/978-3-642-35395-6_30 · Cited by 998 · see citing works
Smart wearable systems: Current status and future challenges
Chan, M., Estève, D., Fourniols, J.-Y., Escriba, C., & Campo, E. (2012) · Artificial Intelligence in Medicine · doi:10.1016/j.artmed.2012.09.003 · Cited by 953 · see citing works
Myoelectrical manifestations of localized muscular fatigue in humans.
Luca, C. J. D. (1984) · PubMed · Cited by 875 · see citing works
Evaluation of a threshold-based tri-axial accelerometer fall detection algorithm
Bourke, A. K., O’Brien, J., & Lyons, G. M. (2006) · Gait & Posture · doi:10.1016/j.gaitpost.2006.09.012 · Cited by 823 · see citing works
EEG in the diagnosis, classification, and management of patients with epilepsy
Smith, S. J. (2005) · Journal of Neurology Neurosurgery & Psychiatry · doi:10.1136/jnnp.2005.069245 · Cited by 802 · see citing works
Applications, challenges, and prospective in emerging body area networking technologies
Patel, M., & Wang, J. (2010) · IEEE Wireless Communications · doi:10.1109/mwc.2010.5416354 · Cited by 640 · see citing works
Enhancing the quality of life through wearable technology
Park, S., & Jayaraman, S. (2003) · IEEE Engineering in Medicine and Biology Magazine · doi:10.1109/memb.2003.1213625 · Cited by 615 · see citing works
Sharma, N., & Gedeon, T. (2012) · Computer Methods and Programs in Biomedicine · doi:10.1016/j.cmpb.2012.07.003 · Cited by 506 · see citing works
Smart Vest: Wearable multi-parameter remote physiological monitoring system
Pandian, P. S., Mohanavelu, K., Safeer, K. P., Kotresh, T. M., Shakunthala, D. T., Gopal, P., & Padaki, V. C. (2007) · Medical Engineering & Physics · doi:10.1016/j.medengphy.2007.05.014 · Cited by 420 · see citing works
Compressed Sensing System Considerations for ECG and EMG Wireless Biosensors
Dixon, A. M. R., Allstot, E. G., Gangopadhyay, D., & Allstot, D. J. (2012) · IEEE Transactions on Biomedical Circuits and Systems · doi:10.1109/tbcas.2012.2193668 · Cited by 312 · see citing works
Recognition of dietary activity events using on-body sensors
Amft, O., & Tröster, G. (2008) · Artificial Intelligence in Medicine · doi:10.1016/j.artmed.2007.11.007 · Cited by 220 · see citing works
Optimization for training neural nets
Barnard, E. (1992) · IEEE Transactions on Neural Networks · doi:10.1109/72.125864 · Cited by 209 · see citing works
Compressed Sensing for Bioelectric Signals: A Review
Craven, D., McGinley, B., Kilmartin, L., Glavin, M., & Jones, E. (2015) · IEEE Journal of Biomedical and Health Informatics · doi:10.1109/jbhi.2014.2327194 · Cited by 182 · see citing works
MOPET: A context-aware and user-adaptive wearable system for fitness training
Buttussi, F., & Chittaro, L. (2008) · Artificial Intelligence in Medicine · doi:10.1016/j.artmed.2007.11.004 · Cited by 172 · see citing works
Compressed sensing based method for ECG compression
Polanía, L. F., Carrillo, R. E., Blanco–Velasco, M., & Barner, K. E. (2011) · IEEE International Conference on Acoustics Speech and Signal Processing · doi:10.1109/icassp.2011.5946515 · Cited by 157 · see citing works
A review of wearable sensors and systems with application in rehabilitation
Patel, S., Park, H., Bonato, P., Chan, L. E., & Rodgers, M. M. (2011) · DSpace@MIT (Massachusetts Institute of Technology) · Cited by 148 · see citing works
Holz, E. M., Höhne, J., Staiger-Sälzer, P., Tangermann, M., & Kübler, A. (2013) · Artificial Intelligence in Medicine · doi:10.1016/j.artmed.2013.08.001 · Cited by 111 · see citing works
Compressive sensing scalp EEG signals: implementations and practical performance
Abdulghani, A. M., Casson, A. J., & Rodriguez–Villegas, E. (2011) · Medical & Biological Engineering & Computing · doi:10.1007/s11517-011-0832-1 · Cited by 91 · see citing works
Data Acquisition through Joint Compressive Sensing and Principal Component Analysis
Masiero, R., Quer, G., Munaretto, D., Rossi, M., Widmer, J., & Zorzi, M. (2009) · Globecom · doi:10.1109/glocom.2009.5425458 · Cited by 88 · see citing works
Castroflorio, T., Mesin, L., Tartaglia, G. M., et al. (2013) · IEEE Journal of Biomedical and Health Informatics · doi:10.1109/jbhi.2013.2274532 · Cited by 61 · see citing works
Self-citationProcess and outcome for international reliability in sleep scoring
Zhang, X., Dong, X., Kantelhardt, J. W., et al. (2014) · Sleep And Breathing · doi:10.1007/s11325-014-0990-0 · Cited by 57 · see citing works
Toward Online Data Reduction for Portable Electroencephalography Systems in Epilepsy
Casson, A. J., & Rodriguez–Villegas, E. (2009) · IEEE Transactions on Biomedical Engineering · doi:10.1109/tbme.2009.2027607 · Cited by 53 · see citing works
Conradsen, I., Beniczky, S., Wolf, P., Kjær, T. W., Sams, T., & Sørensen, H. B. D. (2011) · Computer Methods and Programs in Biomedicine · doi:10.1016/j.cmpb.2011.06.005 · Cited by 50 · see citing works
An Adaptive Sampling System for Sensor Nodes in Body Area Networks
Rieger, R., & Taylor, J. T. (2009) · IEEE Transactions on Neural Systems and Rehabilitation Engineering · doi:10.1109/tnsre.2008.2008648 · Cited by 38 · see citing works
Comparison of methods for adaptive sampling of cardiac electrograms and electrocardiograms
Blanchard, S. M., & Barr, R. C. (1985) · Medical & Biological Engineering & Computing · doi:10.1007/bf02441592 · Cited by 32 · see citing works
Investigation of Nonlinear Pupil Dynamics by Recurrence Quantification Analysis
Mesin, L., Monaco, A., & Cattaneo, R. (2013) · BioMed Research International · doi:10.1155/2013/420509 · Cited by 31 · see citing works
Self-citationClinical evaluation of a wireless ECG sensor system for arrhythmia diagnostic purposes
Fensli, R. W., GUNDERSEN, T., Snaprud, T., & Hejlesen, O. K. (2013) · Medical Engineering & Physics · doi:10.1016/j.medengphy.2013.03.002 · Cited by 30 · see citing works
Adaptive band-pass filter (ABPF) for tremor extraction from inertial sensor data
Popović, L. Z., Šekara, T. B., & Popović, M. B. (2010) · Computer Methods and Programs in Biomedicine · doi:10.1016/j.cmpb.2010.03.018 · Cited by 29 · see citing works
Cordina, M., & Debono, C. J. (2009) · IEEE Wireless Communications and Networking Conference · doi:10.1109/wcnc.2009.4917803 · Cited by 25 · see citing works
Signal agnostic compressive sensing for Body Area Networks: Comparison of signal reconstructions
Casson, A. J., & Rodriguez–Villegas, E. (2012) · doi:10.1109/embc.2012.6346966 · Cited by 21 · see citing works
A neural data-driven algorithm for smart sampling in wireless sensor networks
Mesin, L., Aram, S., & Pasero, E. G. A. (2014) · EURASIP Journal on Wireless Communications and Networking · doi:10.1186/1687-1499-2014-23 · Cited by 19 · see citing works
Self-citationUnderstanding the evolving role of the Personal Health Record
Pinciroli, F., & Pagliari, C. (2015) · Computers in Biology and Medicine · doi:10.1016/j.compbiomed.2015.02.008 · Cited by 14 · see citing works
Signorini, M. G. (2005) · doi:10.1109/iembs.2004.1404511 · Cited by 12 · see citing works
Mesin, L., & Costa, P. (2013) · Journal of Clinical Monitoring and Computing · doi:10.1007/s10877-013-9544-4 · Cited by 10 · see citing works
Self-citationA Low Cost ECG Biometry System Based on an Ensemble of Support Vector Machine Classifiers
Mesin, L., Munera, A., & Pasero, E. G. A. (2016) · Smart innovation, systems and technologies · doi:10.1007/978-3-319-33747-0_42 · Cited by 10 · see citing works
Self-citationBehavioural reconfigurable and adaptive data reduction in body sensor networks
Dabiri, F., Noshadi, H., & Sarrafzadeh, M. (2013) · International Journal of Autonomous and Adaptive Communications Systems · doi:10.1504/ijaacs.2013.054825 · Cited by 3 · see citing works
Energy-efficient long term physiological monitoring
Banerjee, A., Nabar, S., Gupta, S. K. S., et al. (2011) · doi:10.1145/2077546.2077566 · Cited by 1 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Wearable biosensors for healthcare monitoring
Kim, J., Campbell, A. S., de Ávila, B. E.-F., & Wang, J. (2019) · Nature Biotechnology · doi:10.1038/s41587-019-0045-y · Cited by 3,373 · see citing works
Wearable Chemical Sensors: Present Challenges and Future Prospects
Bandodkar, A. J., Jeerapan, I., & Wang, J. (2016) · ACS Sensors · doi:10.1021/acssensors.6b00250 · Cited by 778 · see citing works
- Authors
- Mesin, L.
- Affiliations
- Politecnico di Torino (IT)
- Corresponding author
- Mesin, Luca
- ORCID
- Mesin, Luca
- Venue
- Computers in Biology and Medicine
- Publisher
- Elsevier BV
- Published
- 2016-04
- Volume
- 71
- Pages
- 223-230
- ISSN
- 0010-4825 (ISSN-L)
- OpenAlex
- W2259945320
- Semantic Scholar
- acdfc71314caccdb935ac24175374c1ddd5ea563
- Cited by
- 22
- References
- 45
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 4 · 2022: 2 · 2021: 5 · 2020: 3 · 2019: 2 · 2018: 1 · 2017: 2 · 2016: 1
- FWCI
- 0.96
- Type
- journal article
- Language
- en
- Open access
- green
- hdl.handle.net
- Licence
- cc-by-nc-nd
- www.elsevier.com/tdm/userlicense/1.0/ (tdm)
- Locations
- Computers in Biology and Medicine (publishedVersion)
- PubMed (publishedVersion)
- PORTO@Iris (submittedVersion, cc-by-nc-nd)
- PORTO Publications Open Repository TOrino (Politecnico di Torino) (submittedVersion, cc-by-nc-nd)
- Funders
- Department of Neurorehabilitation Engineering, University Medical Center, Goettingen
- Dipartimento di Elettronica e Telecomunicazioni, Politecnico di Torino
- Epilepsy Service, Department of Neuroscience, University of Torino
- EMG, ECG and EEG
- Topics
- Physical Sciences › Engineering › Biomedical Engineering › Wireless Body Area Networks
- Health Sciences › Medicine › Cardiology and Cardiovascular Medicine › ECG Monitoring and Analysis
- Physical Sciences › Engineering › Computational Mechanics › Sparse and Compressive Sensing Techniques
- Keywords
- adaptive sampling, non-uniform sampling, neural network prediction, uncertainty estimation, physiological signals, non-stationary signals, wireless body area networks, sampling rate reduction, spectral estimation, electromyography, electrocardiogram, EEG, body acceleration
- MeSH terms
- Algorithms, Electronic Data Processing, Electrocardiography, Electroencephalography, Models, Theoretical, Accelerometry
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review