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Endophilin-B regulates autophagy during synapse development and neurodegeneration

Hernandez-Diaz, Sergio, Ghimire, Saurav, Sanchez-Mirasierra, Irene, Montecinos-Oliva, Carla, Swerts, Jef, Kuenen, Sabine, Verstreken, Patrik, Soukup, Sandra-Fausia·2022·Neurobiology of Disease

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Crossref · 10.1016/j.nbd.2021.105595

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  • LRRK2 activity plays a role in synaptic vesicle endocytosis, activation of autophagy, and axonal transport of growth factor receptors.

    “LRRK2 activity plays a role in synaptic vesicle endocytosis, activation of autophagy, and axonal transport of growth factor receptors [2, 7, 10, 24, 25, 36, 51, 59, 62, 75, 77, 96].”

    From Cellular and subcellular localization of Rab10 and phospho-T73 Rab10 in the mouse and human brain (2023) · cites this paper as [25]

    Section 3.4 reports that kinase-active LRRK2 G2019S increases autophagosomes at Drosophila synapses, supporting a role in autophagy. The References list studies on LRRK2 and synaptic endocytosis, but this paper does not itself establish that part of the claim. No passage found supports a role in axonal transport of growth factor receptors. (LLM, conf=0.86)

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Research works printed but not linked: 65

  1. Arranz, 2015, LRRK2 functions in synaptic vesicle endocytosis through a kinase-dependent mechanism, J. Cell Sci., 128, 541
  2. Billes, 2018, Developmentally regulated autophagy is required for eye formation in Drosophila, Autophagy, 14, 1499, 10.1080/15548627.2018.1454569 · DOI
  3. Burke, 2013, Axon degeneration in Parkinson’s disease, Exp. Neurol., 246, 72, 10.1016/j.expneurol.2012.01.011 · DOI
  4. Esteves, 2014, LRRK2, a puzzling protein: insights into Parkinson’s disease pathogenesis, Exp. Neurol., 261, 206, 10.1016/j.expneurol.2014.05.025 · DOI
  5. Feany, 2000, A Drosophila model of Parkinson’s disease, Nature, 404, 394, 10.1038/35006074 · DOI
  6. Glatigny, 2019, Autophagy is required for memory formation and reverses age-related memory decline, Curr. Biol., 29, 435, 10.1016/j.cub.2018.12.021 · DOI · Paper page
  7. Gopaldass, 2017, Membrane scission driven by the PROPPIN Atg18, EMBO J., 36, 3274, 10.15252/embj.201796859 · DOI · Paper page
  8. Harris, 2012, Synaptic energy use and supply, Neuron, 75, 762, 10.1016/j.neuron.2012.08.019 · DOI · Paper page
  9. Healy, 2008, Phenotype, genotype, and worldwide genetic penetrance of LRRK2-associated Parkinson’s disease: a case-control study, Lancet Neurol., 7, 583, 10.1016/S1474-4422(08)70117-0 · DOI · Paper page
  10. Hernandez, 2012, Regulation of presynaptic neurotransmission by macroautophagy, Neuron, 74, 277, 10.1016/j.neuron.2012.02.020 · DOI
  11. Hernandez-Diaz, 2020, The role of lipids in autophagy and its implication in neurodegeneration, Cell Stress, 4, 167, 10.15698/cst2020.07.225 · DOI
  12. Jin, 2018, Live observation of two parallel membrane degradation pathways at axon terminals, Curr. Biol., 28, 1027, 10.1016/j.cub.2018.02.032 · DOI
  13. Judith, 2019, ATG9A shapes the forming autophagosome through Arfaptin 2 and phosphatidylinositol 4-kinase IIIbeta, J. Cell Biol., 218, 1634, 10.1083/jcb.201901115 · DOI
  14. Juhász, 2008, The class III PI(3)K Vps34 promotes autophagy and endocytosis but not TOR signaling in Drosophila, J. Cell Biol., 181, 655, 10.1083/jcb.200712051 · DOI
  15. Karbowski, 2004, Endophilin B1 is required for the maintenance of mitochondrial morphology, J. Cell Biol., 166, 1027, 10.1083/jcb.200407046 · DOI
  16. Kiral, 2020, Autophagy-dependent filopodial kinetics restrict synaptic partner choice during Drosophila brain wiring, Nat. Commun., 11, 1325, 10.1038/s41467-020-14781-4 · DOI
  17. Komatsu, 2006, Loss of autophagy in the central nervous system causes neurodegeneration in mice, Nature, 441, 880, 10.1038/nature04723 · DOI · Paper page
  18. Kramer, 2007, Presynaptic α-Synuclein aggregates, not Lewy bodies, cause neurodegeneration in dementia with Lewy bodies, J. Neurosci., 27, 1405, 10.1523/JNEUROSCI.4564-06.2007 · DOI · Paper page
  19. Krantz, 1990, Drosophila chaoptin, a member of the leucine-rich repeat family, is a photoreceptor cell-specific adhesion molecule, EMBO J., 9, 1969, 10.1002/j.1460-2075.1990.tb08325.x · DOI
  20. Lee, 2007, Loss of LRRK2/PARK8 induces degeneration of dopaminergic neurons in Drosophila, Biochem. Biophys. Res. Commun., 358, 534, 10.1016/j.bbrc.2007.04.156 · DOI
  21. Lewis, 2007, The R1441C mutation of LRRK2 disrupts GTP hydrolysis, Biochem. Biophys. Res. Commun., 357, 668, 10.1016/j.bbrc.2007.04.006 · DOI
  22. Li, 2020, Energy Efficient Synaptic Plasticity, eLife, 9, e50804, 10.7554/eLife.50804 · DOI
  23. Lima, 2005, Remote control of behavior through genetically targeted photostimulation of neurons, Cell, 121, 141, 10.1016/j.cell.2005.02.004 · DOI · Paper page
  24. Liu, 2016, Bif-1 deficiency impairs lipid homeostasis and causes obesity accompanied by insulin resistance, Sci. Rep., 6, 20453, 10.1038/srep20453 · DOI
  25. Mao, 2009, Eight different types of dopaminergic neurons innervate the Drosophila mushroom body neuropil: anatomical and physiological heterogeneity, Front. Neural Circuits, 3, 5, 10.3389/neuro.04.005.2009 · DOI
  26. Matta, 2012, LRRK2 controls an EndoA phosphorylation cycle in synaptic endocytosis, Neuron, 75, 1008, 10.1016/j.neuron.2012.08.022 · DOI · Paper page
  27. Mazzocchi, 2020, The class II histone deacetylases as therapeutic targets for Parkinson’s disease. Neuronal, Signal., 4
  28. Monastirioti, 1999, Biogenic amine systems in the fruit fly Drosophila melanogaster, Microsc. Res. Tech., 45, 106, 10.1002/(SICI)1097-0029(19990415)45:2<106::AID-JEMT5>3.0.CO;2-3 · DOI
  29. Nagy, 2014, Atg17/FIP200 localizes to perilysosomal ref(2)P aggregates and promotes autophagy by activation of Atg1 in Drosophila, Autophagy, 10, 453, 10.4161/auto.27442 · DOI · Paper page
  30. Nath, 2014, Lipidation of the LC3/GABARAP family of autophagy proteins relies on a membrane-curvature-sensing domain in Atg3, Nat. Cell Biol., 16, 415, 10.1038/ncb2940 · DOI
  31. Ng, 2009, Parkin protects against LRRK2 G2019S mutant-induced dopaminergic neurodegeneration in Drosophila, J. Neurosci., 29, 11257, 10.1523/JNEUROSCI.2375-09.2009 · DOI
  32. Nguyen, 2017, Sensing membrane curvature in macroautophagy, J. Mol. Biol., 429, 457, 10.1016/j.jmb.2017.01.006 · DOI
  33. Okerlundk, 2017, Bassoon controls presynaptic autophagy through Atg5, Neuron, 93, 897, 10.1016/j.neuron.2017.01.026 · DOI
  34. Peter, 2004, BAR domains as sensors of membrane curvature: the amphiphysin BAR structure, Science, 303, 495, 10.1126/science.1092586 · DOI · Paper page
  35. Plowey, 2008, Role of autophagy in G2019S-LRRK2-associated neurite shortening in differentiated SH-SY5Y cells, J. Neurochem., 105, 1048, 10.1111/j.1471-4159.2008.05217.x · DOI
  36. Popelka, 2018, An atypical BAR domain protein in autophagy, Autophagy, 14, 1155, 10.1080/15548627.2018.1445915 · DOI
  37. Pulipparacharuvil, 2005, Drosophila Vps16A is required for trafficking to lysosomes and biogenesis of pigment granules, J. Cell Sci., 118, 3663, 10.1242/jcs.02502 · DOI
  38. Ramaswami, 1994, Intermediates in synaptic vesicle recycling revealed by optical imaging of Drosophila neuromuscular junctions, Neuron, 13, 363, 10.1016/0896-6273(94)90353-0 · DOI
  39. Riemensperger, 2013, A single dopamine pathway underlies progressive locomotor deficits in a Drosophila model of Parkinson disease, Cell Rep., 5, 952, 10.1016/j.celrep.2013.10.032 · DOI
  40. Rodríguez-Muela, 2013, Balance between autophagic pathways preserves retinal homeostasis, Aging Cell, 12, 478, 10.1111/acel.12072 · DOI
  41. Schütter, 2020, Local fatty acid channeling into phospholipid synthesis drives Phagophore expansion during autophagy, Cell, 180, 135, 10.1016/j.cell.2019.12.005 · DOI
  42. Schwaerzel, 2003, Dopamine and octopamine differentiate between aversive and appetitive olfactory memories in Drosophila, J. Neurosci., 23, 10495, 10.1523/JNEUROSCI.23-33-10495.2003 · DOI · Paper page
  43. Selkoe, 2002, Alzheimer’s disease is a synaptic failure, Science (80), 298, 789, 10.1126/science.1074069 · DOI · Paper page
  44. Serfass, 2017, Endophilin B2 facilitates endosome maturation in response to growth factor stimulation, autophagy induction, and influenza a virus infection, J. Biol. Chem., 292, 10097, 10.1074/jbc.M117.792747 · DOI
  45. Shen, 2009, Autophagy promotes synapse development in Drosophila, J. Cell Biol., 187, 71, 10.1083/jcb.200907109 · DOI · Paper page
  46. Soukup, 2018, Parkinson’s disease: convergence on synaptic homeostasis, EMBO J., 37, 1, 10.15252/embj.201898960 · DOI
  47. Soukup, 2013, DLin-7 is required in postsynaptic lamina neurons to prevent light-induced photoreceptor degeneration in drosophila, Curr. Biol., 23, 1349, 10.1016/j.cub.2013.05.060 · DOI
  48. Soukup, 2016, A LRRK2-dependent EndophilinA Phosphoswitch is critical for macroautophagy at presynaptic terminals, Neuron, 92, 829, 10.1016/j.neuron.2016.09.037 · DOI · Paper page
  49. Sun, 2018, Neural control of startle-induced locomotion by the mushroom bodies and associated neurons in Drosophila, Front. Syst. Neurosci., 12, 6, 10.3389/fnsys.2018.00006 · DOI
  50. Takahashi, 2007, Bif-1 interacts with Beclin 1 through UVRAG and regulates autophagy and tumorigenesis, Nat. Cell Biol., 9, 1142, 10.1038/ncb1634 · DOI
  51. Tan, 2018, Upregulation of histone deacetylase 2 in laser capture nigral microglia in Parkinson’s disease, Neurobiol. Aging, 68, 134, 10.1016/j.neurobiolaging.2018.02.018 · DOI
  52. Tang, 2014, Loss of mTOR-dependent macroautophagy causes autistic-like synaptic pruning deficits, Neuron, 83, 1131, 10.1016/j.neuron.2014.07.040 · DOI · Paper page
  53. Tooze, 2010, The origin of the autophagosomal membrane, Nat. Cell Biol., 12, 831, 10.1038/ncb0910-831 · DOI
  54. Tsai, 2014, Endophilin B is required for the Drosophila oocyte to endocytose yolk downstream of Oskar, Development, 141, 563, 10.1242/dev.097022 · DOI
  55. Van Vactor, 1988, Analysis of mutants in chaoptin, a photoreceptor cell-specific glycoprotein in Drosophila, reveals its role in cellular morphogenesis, Cell, 52, 281, 10.1016/0092-8674(88)90517-X · DOI
  56. Vanhauwaert, 2017, The SAC 1 domain in synaptojanin is required for autophagosome maturation at presynaptic terminals, EMBO J., 36, 1392, 10.15252/embj.201695773 · DOI
  57. Verstreken, 2002, Endophilin mutations block Clathrin-mediated endocytosis but not neurotransmitter release, Cell, 109, 101, 10.1016/S0092-8674(02)00688-8 · DOI
  58. Wang, 2015, Loss of endophilin-B1 exacerbates Alzheimer’s disease pathology, Brain, 138, 2005, 10.1093/brain/awv128 · DOI
  59. Wang, 2019, Neuronal susceptibility to beta-amyloid toxicity and ischemic injury involves histone deacetylase-2 regulation of endophilin-B1, Brain Pathol., 29, 164, 10.1111/bpa.12647 · DOI
  60. West, 2005, Parkinson’s disease-associated mutations in leucine-rich repeat kinase 2 augment kinase activity, Proc. Natl. Acad. Sci. U. S. A., 102, 16842, 10.1073/pnas.0507360102 · DOI · Paper page
  61. Xiong, 2018, Modeling Parkinson’s disease in Drosophila: what have we learned for dominant traits?, Front. Neurol., 9, 228, 10.3389/fneur.2018.00228 · DOI
  62. Yellman, 1997, Conserved and sexually dimorphic behavioral responses to biogenic amines in decapitated Drosophila, Proc. Natl. Acad. Sci. U. S. A., 94, 4131, 10.1073/pnas.94.8.4131 · DOI · Paper page
  63. Yu, 2018, Endophilin a and B join forces with Clathrin to mediate synaptic vesicle recycling in Caenorhabditis elegans, Front. Mol. Neurosci., 11, 196, 10.3389/fnmol.2018.00196 · DOI
  64. Zhang, 2019, Partial depletion of dopaminergic neurons in the substantia nigra impairs olfaction and alters neural activity in the olfactory bulb, Sci. Rep., 1–13
  65. Zhou, 2015, Autophagy supports survival and phototransduction protein levels in rod photoreceptors, Cell Death Differ., 22, 488, 10.1038/cdd.2014.229 · DOI

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Metadata

Authors
Hernandez-Diaz, S., Ghimire, S., Sanchez-Mirasierra, I., Montecinos-Oliva, C., Swerts, J., Kuenen, S., Verstreken, P., & Soukup, S.-F.
Venue
Neurobiology of Disease
Publisher
Elsevier BV
Published
2022-02
Volume
163
Pages
105595
ISSN
0969-9961
Cited by
27
References
3
Language
en
Funders
  • Conseil Régional Aquitaine (18001716-18001717, ERC-2014-CoG-646671)
  • Vlaamse regering
  • Fonds Wetenschappelijk Onderzoek (ERC-2020-PoC 963639, G0B8119N)

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