Student or educator? Sign up with your school email and get 6 months of Pro free.
Cited by 611

The DOI matches its Crossref record; 5 of the 5 references it cites were found in a registry or an index.

Epigenetic Memory and Preferential Lineage-Specific Differentiation in Induced Pluripotent Stem Cells Derived from Human Pancreatic Islet Beta Cells

Open access
Bar-Nur, Ori, Russ, Holger A., Efrat, Shimon, Benvenisty, Nissim·2011·Cell Stem Cell

Abstract

Human induced pluripotent stem cells (HiPSCs) appear to be highly similar to human embryonic stem cells (HESCs). Using two genetic lineage-tracing systems, we demonstrate the generation of iPSC lines from human pancreatic islet beta cells. These reprogrammed cells acquired markers of pluripotent cells and differentiated into the three embryonic germ layers. However, the beta cell-derived iPSCs (BiPSCs) maintained open chromatin structure at key beta-cell genes, together with a unique DNA methylation signature that distinguishes them from other PSCs. BiPSCs also demonstrated an increased ability to differentiate into insulin-producing cells both in vitro and in vivo, compared with ESCs and isogenic non-beta iPSCs. Our results suggest that the epigenetic memory may predispose BiPSCs to differentiate more readily into insulin producing cells. These findings demonstrate that HiPSC phenotype may be influenced by their cells of origin, and suggest that their skewed differentiation potential may be advantageous for cell replacement therapy.

Overview

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Integrity signals

Registry

Crossref · 10.1016/j.stem.2011.06.007

Cites

5 of 5 references verified0 citation errors · 0 not checkable

Statistics

Verification

Claims the paper makes

The claims and statistics of this paper haven’t been checked yet.

Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.

A few free checks a day · papers already verified open instantly · results are public

Self-check

Percentages, sums and reported differences re-computed from the paper’s own numbers.

The self-check needs the paper’s full text.

Citations

Cites

Research works printed but not linked: 33

  1. Aasen, 2008, Efficient and rapid generation of induced pluripotent stem cells from human keratinocytes, Nat. Biotechnol., 26, 1276, 10.1038/nbt.1503 · DOI · Paper page
  2. Chan, 2009, Live cell imaging distinguishes bona fide human iPS cells from partially reprogrammed cells, Nat. Biotechnol., 27, 1033, 10.1038/nbt.1580 · DOI · Paper page
  3. Chin, 2009, Induced pluripotent stem cells and embryonic stem cells are distinguished by gene expression signatures, Cell Stem Cell, 5, 111, 10.1016/j.stem.2009.06.008 · DOI · Paper page
  4. Daley, 2009, Broader implications of defining standards for the pluripotency of iPSCs, Cell Stem Cell, 4, 200, 10.1016/j.stem.2009.02.009 · DOI
  5. Doi, 2009, Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts, Nat. Genet., 41, 1350, 10.1038/ng.471 · DOI · Paper page
  6. Eminli, 2009, Differentiation stage determines potential of hematopoietic cells for reprogramming into induced pluripotent stem cells, Nat. Genet., 41, 968, 10.1038/ng.428 · DOI · Paper page
  7. Feng, 2010, Hemangioblastic derivatives from human induced pluripotent stem cells exhibit limited expansion and early senescence, Stem Cells, 28, 704, 10.1002/stem.321 · DOI · Paper page
  8. Gao, 2003, Somatic cell-like features of cloned mouse embryos prepared with cultured myoblast nuclei, Biol. Reprod., 69, 48, 10.1095/biolreprod.102.014522 · doi:10.1095/biolreprod.102.014522
  9. Ghosh, 2010, Persistent donor cell gene expression among human induced pluripotent stem cells contributes to differences with human embryonic stem cells, PLoS ONE, 5, e8975, 10.1371/journal.pone.0008975 · DOI · Paper page
  10. Hu, 2010, Neural differentiation of human induced pluripotent stem cells follows developmental principles but with variable potency, Proc. Natl. Acad. Sci. USA, 107, 4335, 10.1073/pnas.0910012107 · DOI · Paper page
  11. Itskovitz-Eldor, 2000, Differentiation of human embryonic stem cells into embryoid bodies compromising the three embryonic germ layers, Mol. Med., 6, 88, 10.1007/BF03401776 · DOI · Paper page
  12. Kim, 2009, Direct reprogramming of human neural stem cells by OCT4, Nature, 461, 10.1038/nature08436 · DOI · Paper page
  13. Kim, 2010, Epigenetic memory in induced pluripotent stem cells, Nature, 467, 285, 10.1038/nature09342 · DOI · Paper page
  14. Lister, 2011, Hotspots of aberrant epigenomic reprogramming in human induced pluripotent stem cells, Nature, 471, 68, 10.1038/nature09798 · DOI · Paper page
  15. Maherali, 2008, Guidelines and techniques for the generation of induced pluripotent stem cells, Cell Stem Cell, 3, 595, 10.1016/j.stem.2008.11.008 · DOI · Paper page
  16. Marchetto, 2009, Transcriptional signature and memory retention of human-induced pluripotent stem cells, PLoS ONE, 4, e7076, 10.1371/journal.pone.0007076 · DOI · Paper page
  17. Mayshar, 2010, Identification and classification of chromosomal aberrations in human induced pluripotent stem cells, Cell Stem Cell, 7, 521, 10.1016/j.stem.2010.07.017 · DOI · Paper page
  18. McKnight, 2010, Deconstructing pancreas development to reconstruct human islets from pluripotent stem cells, Cell Stem Cell, 6, 300, 10.1016/j.stem.2010.03.003 · DOI
  19. Ng, 2005, Epigenetic memory of active gene transcription is inherited through somatic cell nuclear transfer, Proc. Natl. Acad. Sci. USA, 102, 1957, 10.1073/pnas.0409813102 · DOI
  20. Ng, 2008, Epigenetic memory of an active gene state depends on histone H3.3 incorporation into chromatin in the absence of transcription, Nat. Cell Biol., 10, 102, 10.1038/ncb1674 · DOI · Paper page
  21. Ohi, 2011, Incomplete DNA methylation underlies a transcriptional memory of somatic cells in human iPS cells, Nat. Cell Biol., 13, 541, 10.1038/ncb2239 · DOI · Paper page
  22. Park, 2008, Reprogramming of human somatic cells to pluripotency with defined factors, Nature, 451, 141, 10.1038/nature06534 · DOI · Paper page
  23. Pick, 2009, Clone- and gene-specific aberrations of parental imprinting in human induced pluripotent stem cells, Stem Cells, 27, 2686, 10.1002/stem.205 · DOI · Paper page
  24. Polo, 2010, Cell type of origin influences the molecular and functional properties of mouse induced pluripotent stem cells, Nat. Biotechnol., 28, 848, 10.1038/nbt.1667 · DOI · Paper page
  25. Russ, H.A., and Efrat, S. (in press). In-vivo functional assessment of engineered human insulin-producing cells. In Cell Transplantation, A. Soto-Gutierrez, N. Kobayashi and I.J. Fox, eds. (Norwood, MA: Artech House).
  26. Russ, 2008, In vitro proliferation of cells derived from adult human β-cells revealed by cell-lineage tracing, Diabetes, 57, 1575, 10.2337/db07-1283 · DOI · Paper page
  27. Russ, 2009, Epithelial-mesenchymal transition in cells expanded in vitro from lineage-traced adult human pancreatic beta cells, PLoS ONE, 4, e6417, 10.1371/journal.pone.0006417 · DOI
  28. Santos, 2003, Epigenetic marking correlates with developmental potential in cloned bovine preimplantation embryos, Curr. Biol., 13, 1116, 10.1016/S0960-9822(03)00419-6 · DOI · Paper page
  29. Stadtfeld, 2008, Reprogramming of pancreatic β cells into induced pluripotent stem cells, Curr. Biol., 18, 890, 10.1016/j.cub.2008.05.010 · DOI · Paper page
  30. Takahashi, 2007, Induction of pluripotent stem cells from adult human fibroblasts by defined factors, Cell, 131, 861, 10.1016/j.cell.2007.11.019 · DOI · Paper page
  31. Thomson, 1998, Embryonic stem cell lines derived from human blastocysts, Science, 282, 1145, 10.1126/science.282.5391.1145 · DOI · Paper page
  32. Urbach, 2010, Differential modeling of fragile X syndrome by human embryonic stem cells and induced pluripotent stem cells, Cell Stem Cell, 6, 407, 10.1016/j.stem.2010.04.005 · DOI · Paper page
  33. Wee, 2006, Inheritable histone H4 acetylation of somatic chromatins in cloned embryos, J. Biol. Chem., 281, 6048, 10.1074/jbc.M511340200 · DOI

Cited by

See all 611

Metadata

Authors
Bar-Nur, O., Russ, H. A., Efrat, S., & Benvenisty, N.
Venue
Cell Stem Cell
Publisher
Elsevier BV
Published
2011-07
Volume
9
Issue
1
Pages
17-23
ISSN
  • 1875-9777 (ISSN-L)
  • 1934-5909
OpenAlex
W2081628067
Cited by
611
References
5
FWCI
26.80
Type
journal article
Language
en
Open access
bronze
Licence

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review

Data sources

Bibliographic data: Semantic Scholar, OpenAlex, Crossref.

Contains information from the Semantic Scholar Academic Graph Datasets, made available under the ODC Attribution License (ODC-BY 1.0).

Semantic Scholar’s data is described in: Kinney, R., et al. (2023). The Semantic Scholar Open Data Platform. arXiv:2301.10140.