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Human Intestinal Organoids Maintain Self-Renewal Capacity and Cellular Diversity in Niche-Inspired Culture Condition
Open accessAbstract
Cellular diversity that shapes tissue architecture and function is governed by multiple niche signals. Nonetheless, maintaining cellular diversity in human intestinal organoids has been challenging. Based on niche ligands present in the natural stem cell milieu, we establish a refined organoid culture condition for intestinal epithelia that allows human intestinal organoids to concurrently undergo multi-differentiation and self-renewal. High-throughput screening reveals that the combination of insulin-like growth factor 1 (IGF-1) and fibroblast growth factor 2 (FGF-2) enhances the clonogenic capacity and CRISPR-genome engineering efficiency of human intestinal stem cells. The combination equally enables long-term culture of a range of intestinal organoids, including rat small intestinal organoids. Droplet-based single-cell RNA sequencing further illustrates the conservation of the native cellular diversity in human small intestinal organoids cultured with the refined condition. The modified culture protocol outperforms the conventional method and offers a viable strategy for modeling human intestinal tissues and diseases in an in vivo relevant context.
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“Classical crypt-villus-like architecture is regarded as an important symbol of the successful organoid establishment, exhibiting the proper branching morphology with robust multicellular composition and location reflecting the organoids differentiation and maturation level118,119.”
From Organoids (2022) · cites this paper as [119]
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“scRNA-seq analysis of human intestinal and brain organoids used random forest classifiers to identify the cell types in their organoid cultures;73,74”
From Single-cell transcriptomics of human-skin-equivalent organoids (2023) · cites this paper as [73]
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Cites
Single Lgr5 stem cells build crypt-villus structures in vitro without a mesenchymal niche
Sato, T., Vries, R. G., Snippert, H. J., van de Wetering, M., Barker, N., Stange, D. E., van Es, J. H., Abo, A., Kujala, P., Peters, P. J., et al. (2009) · Nature · doi:10.1038/nature07935 · Cited by 7,204
Self-citationSpatial reconstruction of single-cell gene expression data
Satija, R., Farrell, J. A., Gennert, D., Schier, A. F., & Regev, A. (2015) · Nature Biotechnology · doi:10.1038/nbt.3192 · Cited by 7,055
Sato, T., Stange, D. E., Ferrante, M., Vries, R. G. J., van Es, J. H., van den Brink, S., van Houdt, W. J., Pronk, A., van Gorp, J., Siersema, P. D., et al. (2011) · Gastroenterology · doi:10.1053/j.gastro.2011.07.050 · Cited by 3,753
Self-citationModeling Development and Disease with Organoids
Clevers, H. (2016) · Cell · doi:10.1016/j.cell.2016.05.082 · Cited by 3,196
Batch effects in single-cell RNA-sequencing data are corrected by matching mutual nearest neighbors
Haghverdi, L., Lun, A. T. L., Morgan, M. D., & Marioni, J. C. (2018) · Nature Biotechnology · doi:10.1038/nbt.4091 · Cited by 2,416
A single-cell survey of the small intestinal epithelium
Haber, A. L., Biton, M., Rogel, N., Herbst, R. H., Shekhar, K., Smillie, C., Burgin, G., Delorey, T. M., Howitt, M. R., Katz, Y., et al. (2017) · Nature · doi:10.1038/nature24489 · Cited by 1,750
Activation and signaling of the p38 MAP kinase pathway
Zarubin, T., & Han, J. (2005) · Cell Research · doi:10.1038/sj.cr.7290257 · Cited by 1,711
Long-Term Culture of Genome-Stable Bipotent Stem Cells from Adult Human Liver
Huch, M., Gehart, H., van Boxtel, R., Hamer, K., Blokzijl, F., Verstegen, M. M. A., Ellis, E., van Wenum, M., Fuchs, S. A., de Ligt, J., et al. (2015) · Cell · doi:10.1016/j.cell.2014.11.050 · Cited by 1,619
In vitro expansion of single Lgr5+ liver stem cells induced by Wnt-driven regeneration
Huch, M., Dorrell, C., Boj, S. F., van Es, J. H., Li, V. S. W., van de Wetering, M., Sato, T., Hamer, K., Sasaki, N., Finegold, M. J., et al. (2013) · Nature · doi:10.1038/nature11826 · Cited by 1,555
Self-citationLgr5+ve Stem Cells Drive Self-Renewal in the Stomach and Build Long-Lived Gastric Units In Vitro
Barker, N., Huch, M., Kujala, P., van de Wetering, M., Snippert, H. J., van Es, J. H., Sato, T., Stange, D. E., Begthel, H., van den Born, M., et al. (2010) · Cell Stem Cell · doi:10.1016/j.stem.2009.11.013 · Cited by 1,547
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Cassotta, M., Forbes-Hernández, T. Y., Iglesias, R. C., Ruíz, R., Elexpuru-Zabaleta, M., Giampieri, F., & Battino, M. A. (2020) · Nutrients · doi:10.3390/nu12061827 · Cited by 59
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Kramer, N., Pratscher, B., Meneses, A. M. C., Tschulenk, W., Walter, I., Swoboda, A., Kruitwagen, H. S., Schneeberger, K., Penning, L. C., Spee, B., et al. (2020) · Cells · doi:10.3390/cells9040822 · Cited by 53
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He, X., Jiang, Y. J., Zhang, L., Li, Y., Hu, X., Hua, G., Cai, S., Mo, S., & Peng, J. (2023) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2023.1190637 · Cited by 56
Li, Y., Wang, X., Zhou, X., Chen, H., Song, S., Deng, L., Yao, Y., & Yin, X. (2025) · Nature Communications · doi:10.1038/s41467-024-55567-2 · Cited by 58
Xu, P., Elizalde, M., Masclee, A., Pierik, M. J., & Jonkers, D. M. A. E. (2021) · Journal of Molecular Medicine · doi:10.1007/s00109-021-02045-7 · Cited by 51
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Rizzo, G., Bertotti, A., Leto, S. M., & Vetrano, S. (2021) · Journal of Experimental & Clinical Cancer Research · doi:10.1186/s13046-021-01970-2 · Cited by 51
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Niklinska-Schirtz, B. J., Venkateswaran, S., Anbazhagan, M., Kolachala, V. L., Prince, J., Dodd, A., Chinnadurai, R., Gibson, G. C., Denson, L. A., Cutler, D. J., et al. (2021) · Cellular and Molecular Gastroenterology and Hepatology · doi:10.1016/j.jcmgh.2021.06.018 · Cited by 49
Hirokawa, Y., Clarke, J. E., Palmieri, M., Tan, T., Mouradov, D., Li, S., Lin, C., Li, F., Luo, H., Wu, K., et al. (2021) · Communications Biology · doi:10.1038/s42003-021-02607-y · Cited by 53
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Living biobank-based cancer organoids: prospects and challenges in cancer research
Li, H., Liu, H., & Chen, K. (2022) · Cancer Biology and Medicine · doi:10.20892/j.issn.2095-3941.2021.0621 · Cited by 50
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Sahara, M. (2023) · International Journal of Molecular Sciences · doi:10.3390/ijms24076244 · Cited by 47
Joosten, S. P. J., Spaargaren, M., Clevers, H. C., & Pals, S. T. (2020) · Biochimica et Biophysica Acta (BBA) - Reviews on Cancer · doi:10.1016/j.bbcan.2020.188437 · Cited by 47
Garcia, A. L. C., Arlt, V. M., & Phillips, D. H. (2021) · Mutagenesis · doi:10.1093/mutage/geab023 · Cited by 47
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Hautefort, I., Poletti, M., Papp, D., & Korcsmáros, T. (2022) · Cellular and Molecular Gastroenterology and Hepatology · doi:10.1016/j.jcmgh.2022.04.012 · Cited by 49
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Generation of 3D human gastrointestinal organoids: principle and applications
Zhang, M., Liu, Y., & Chen, Y. (2020) · Cell Regeneration · doi:10.1186/s13619-020-00040-w · Cited by 47
Genshaft, A. S., Ziegler, C. G. K., Tzouanas, C. N., Mead, B. E., Jaeger, A. M., Navia, A. W., King, R. P., Mana, M., Huang, S., Mitsialis, V., et al. (2021) · Nature Communications · doi:10.1038/s41467-021-25279-y · Cited by 44
Foglizzo, V., Cocco, E., & Marchiò, S. (2022) · Cancers · doi:10.3390/cancers14153692 · Cited by 48
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Tan, T., Mouradov, D., Lee, M., Gard, G., Hirokawa, Y., Li, S., Lin, C., Li, F., Luo, H., Wu, K., et al. (2023) · Cell Reports Medicine · doi:10.1016/j.xcrm.2023.101335 · Cited by 47
Parihar, A., Pandita, V., & Khan, R. (2022) · Biotechnology and Bioengineering · doi:10.1002/bit.28166 · Cited by 41
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Bohin, N., McGowan, K., Keeley, T. M., Carlson, E. A., Yan, K. S., & Samuelson, L. C. (2020) · Cellular and Molecular Gastroenterology and Hepatology · doi:10.1016/j.jcmgh.2020.05.013 · Cited by 43
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Devall, M. A. M., Jennelle, L. T., Bryant, J., Bien, S. A., Peters, U., Powell, S. M., & Casey, G. (2020) · PLoS ONE · doi:10.1371/journal.pone.0227116 · Cited by 36
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Tao, B., Li, X., Hao, M., Tian, T., Li, Y., Li, X., Yang, C., Li, Q., Feng, Q., Zhou, H., et al. (2025) · MedComm · doi:10.1002/mco2.70195 · Cited by 38
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Luo, H., Zheng, J., Chen, Y., Wang, T., Zhang, Z., Shan, Y., Xu, J., Yue, M., Fang, W., & Li, X. (2020) · Frontiers in Microbiology · doi:10.3389/fmicb.2020.00821 · Cited by 36
Sato, T., Ishikawa, S., Asano, J., Yamamoto, H., Fujii, M., Sato, T., Yamamoto, K., Kitagaki, K., Akashi, T., Okamoto, R., et al. (2020) · Nature Cell Biology · doi:10.1038/s41556-020-0545-5 · Cited by 36
Self-citationHumayun, M., Ayuso, J. M., Park, K. Y., Genova, B. M. D., Skala, M. C., Kerr, S. C., Knoll, L. J., & Beebe, D. J. (2022) · Science Advances · doi:10.1126/sciadv.abm8012 · Cited by 34
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Lee, H., Yang, S., Lee, K. J., Kim, S.-N., Jeong, J., Kim, K. Y., Jung, C., Jeon, S., Kwon, D., Lee, S., et al. (2024) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2024.1383893 · Cited by 42
Shinohara, M., Arakawa, H., Oda, Y., Shiraki, N., Sugiura, S., Nishiuchi, T., Satoh, T., Iino, K., Leo, S., Kato, Y. S., et al. (2021) · Scientific Reports · doi:10.1038/s41598-021-84861-y · Cited by 34
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Chen, L., Zhong, Y., Ouyang, X., Wang, C., Yin, L., Huang, J., Li, Y., Wang, Q., Xie, J., Huang, P., et al. (2022) · Animal nutrition · doi:10.1016/j.aninu.2022.10.008 · Cited by 33
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Bertorello, S., Cei, F., Fink, D., Niccolai, E., & Amedei, A. (2024) · Microorganisms · doi:10.3390/microorganisms12091828 · Cited by 36
Parada‐Venegas, D., la Fuente, M. D., Dubois‐Camacho, K., Landskron, G., Blokzijl, T., Molina, H., Casanova, M., Cui, Y., Liu, M., Pina, A. M. D. C. D., et al. (2025) · FEBS Journal · doi:10.1111/febs.70289 · Cited by 39
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Hu, Y., Tattikota, S. G., Liu, Y., Comjean, A., Gao, Y., Forman, C., Kim, G. S., Rodiger, J., Papatheodorou, I., dos Santos, G., et al. (2021) · Computational and Structural Biotechnology Journal · doi:10.1016/j.csbj.2021.04.021 · Cited by 34
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Childs, C. J., Holloway, E. M., Sweet, C. W., Tsai, Y.-H., Wu, A., Vallie, A., Eiken, M. K., Capeling, M. M., Zwick, R. K., Palikuqi, B., et al. (2023) · JCI Insight · doi:10.1172/jci.insight.165566 · Cited by 36
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López‐Cortés, A., Guevara‐Ramírez, P., Kyriakidis, N. C., Barba‐Ostria, C., Cáceres, Á. L., Guerrero, S. X., Ortiz‐Prado, E., Munteanu, C. R., Tejera, E., Cevallos-Robalino, D., et al. (2021) · Frontiers in Pharmacology · doi:10.3389/fphar.2021.598925 · Cited by 30
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Ogoke, O., Maloy, M. H., & Parashurama, N. (2020) · Biological reviews/Biological reviews of the Cambridge Philosophical Society · doi:10.1111/brv.12650 · Cited by 28
Bollen, Y., Hageman, J. H., van Leenen, P., Derks, L. L. M., Ponsioen, B., Amorie, J. R. B. D., Verlaan-Klink, I., van den Bos, M., Terstappen, L. W. M. M., van Boxtel, R., et al. (2022) · PLoS Biology · doi:10.1371/journal.pbio.3001527 · Cited by 29
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Takahashi, J., Mizutani, T., Sugihara, H. Y., Nagata, S., Kato, S., Hiraguri, Y., Takeoka, S., Tsuchiya, M., Kuno, R., Kakinuma, S., et al. (2022) · Cell Reports Methods · doi:10.1016/j.crmeth.2022.100337 · Cited by 29
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Takayama, K., Ito, K., Matsui, A., Yamashita, T., Kawakami, K., Hirayama, D., Kishimoto, W., Nakase, H., & Mizuguchi, H. (2020) · Drug Metabolism and Disposition · doi:10.1124/dmd.120.000283 · Cited by 28
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Miedzybrodzka, E. L., Foreman, R. E., Lu, V. B., George, A. L., Smith, C. A., Larraufie, P., Kay, R. G., Goldspink, D. A., Reimann, F. M., & Gribble, F. M. (2021) · Molecular Metabolism · doi:10.1016/j.molmet.2021.101356 · Cited by 31
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Huang, K., Li, M., Li, Q., Chen, Z., Zhang, Y., & Gu, Z. (2024) · Computers in Biology and Medicine · doi:10.1016/j.compbiomed.2024.108322 · Cited by 27
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Onji, M., Sigl, V., Lendl, T., Novatchkova, M., Ullate‐Agote, A., Andersson-Rolf, A., Kozieradzki, I., Koglgruber, R., Pai, T., Lichtscheidl, D., et al. (2024) · Nature · doi:10.1038/s41586-024-08284-1 · Cited by 26
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Kellner, M. J., Monteil, V., Zelger, P., Pei, G., Jiao, J., Onji, M., Nayak, K., Zilbauer, M., Balkema‐Buschmann, A., Dorhoi, A., et al. (2025) · Nature Immunology · doi:10.1038/s41590-025-02155-1 · Cited by 29
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Zwiggelaar, R. T., Lindholm, H. T., Fosslie, M., Pedersen, M. T., Ohta, Y., Díez-Sánchez, A., Martín-Alonso, M., Ostrop, J., Matano, M., Parmar, N., et al. (2020) · Science Advances · doi:10.1126/sciadv.abc0367 · Cited by 26
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Funata, M., Nio, Y., Erion, D. M., Thompson, W. L., & Takebe, T. (2020) · Cell Death and Differentiation · doi:10.1038/s41418-020-00661-3 · Cited by 28
Sugimoto, S., & Sato, T. (2021) · Cellular and Molecular Gastroenterology and Hepatology · doi:10.1016/j.jcmgh.2021.06.027 · Cited by 27
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Yaqinuddin, A., Jabri, A., Mhannayeh, A., Taftafa, B., Alsharif, M., Abbad, T., Khan, J. A., Elsalti, A., Chinnappan, R., Alshehri, E. A., et al. (2025) · Frontiers in Cardiovascular Medicine · doi:10.3389/fcvm.2025.1537730 · Cited by 29
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Mahalingam, R., Dharmalingam, P., Santhanam, A., Kotla, S., Davuluri, G., Karmouty‐Quintana, H., Guha, A., & Thandavarayan, R. A. (2020) · Journal of Cellular Physiology · doi:10.1002/jcp.30054 · Cited by 25
Orr, B., Sutton, K., Christian, S., Nash, T. J., Niemann, H., Hansen, L. L., McGrew, M. J., Jensen, S. R., & Vervelde, L. (2021) · Veterinary Research · doi:10.1186/s13567-021-01010-z · Cited by 27
Ghorbaninejad, M., Asadzadeh‐Aghdaei, H., Baharvand, H., & Meyfour, A. (2023) · Life Sciences · doi:10.1016/j.lfs.2023.121506 · Cited by 27
Cui, W., Nagano, Y., Morita, S., Tanoue, T., Yamane, H., Ishikawa, K., Sato, T., Kubo, M., Hori, S., Taniguchi, T., et al. (2023) · The Journal of Experimental Medicine · doi:10.1084/jem.20221773 · Cited by 25
Self-citationGenova, E. C., Cavion, F., Lucafò, M., Leo, L. D., Pelin, M., Stocco, G., & Decorti, G. (2019) · World Journal of Stem Cells · doi:10.4252/wjsc.v11.i12.1020 · Cited by 26
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Okamoto, T., Natsume, Y., Doi, M., Nosato, H., Iwaki, T., Yamanaka, H., Yamamoto, M., Kawachi, H., Noda, T., Nagayama, S., et al. (2022) · Cancer Science · doi:10.1111/cas.15396 · Cited by 25
Metadata
- Authors
- Fujii, M., Matano, M., Toshimitsu, K., Takano, A., Mikami, Y., Nishikori, S., Sugimoto, S., & Sato, T.
- Affiliations
- Keio University (JP)
- Otsuka (Japan) (JP)
- Corresponding author
- Sato, Toshiro
- ORCID
- Venue
- Cell Stem Cell
- Publisher
- Elsevier BV
- Published
- 2018-12
- Volume
- 23
- Issue
- 6
- Pages
- 787-793.e6
- ISSN
- 1875-9777 (ISSN-L)
- 1934-5909
- OpenAlex
- W2904971405
- Cited by
- 558
- References
- 38
- Citations by year
- 2026: 77 · 2025: 94 · 2024: 72 · 2023: 76 · 2022: 83 · 2021: 71 · 2020: 70 · 2019: 14
- FWCI
- 14.43
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Cell stem cell (publishedVersion)
- PubMed (publishedVersion)
- Funders
- Japan Agency for Medical Research and Development (18cm0106206h0003)
- Topics
- Health Sciences › Medicine › Oncology › Cancer Cells and Metastasis
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Pluripotent Stem Cells Research
- Health Sciences › Medicine › Gastroenterology › Digestive system and related health
- Keywords
- intestinal organoids, self-renewal, cellular diversity, intestinal stem cells, insulin-like growth factor I, FGF2, clonogenicity, CRISPR gene editing, small intestinal organoids, single-cell RNA sequencing, tissue engineering
- MeSH terms
- Cell Self Renewal, Animals, Cells, Cultured, Humans, Intestines, Male, Organoids, Rats, Inbred Lew, Cell Culture Techniques, Rats, Stem Cell Niche
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