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Hybrid Structural Model of the Complete Human ESCRT-0 Complex

Ren, Xuefeng, Kloer, Daniel P., Kim, Young C., Ghirlando, Rodolfo, Saidi, Layla F., Hummer, Gerhard, Hurley, James H.·2009·Structure

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  1. Asao, 1997, Hrs is associated with STAM, a signal-transducing adaptor molecule - Its suppressive effect on cytokine-induced cell growth, J. Biol. Chem., 272, 32785, 10.1074/jbc.272.52.32785 · DOI
  2. Bache, 2003, Hrs regulates multivesicular body formation via ESCRT recruitment to endosomes, J. Cell Biol., 162, 435, 10.1083/jcb.200302131 · DOI
  3. Bache, 2003, STAM and Hrs are subunits of a multivalent ubiquitin-binding complex on early endosomes, J. Biol. Chem., 278, 12513, 10.1074/jbc.M210843200 · DOI · Paper page
  4. Bilodeau, 2002, The Vps27p-Hse1p complex binds ubiquitin and mediates endosomal protein sorting, Nat. Cell Biol., 4, 534, 10.1038/ncb815 · DOI
  5. Bilodeau, 2003, Vps27-Hse1 and ESCRT-I complexes cooperate to increase efficiency of sorting ubiquitinated proteins at the endosome, J. Cell Biol., 163, 237, 10.1083/jcb.200305007 · DOI
  6. Bricogne, 2003, Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0, Acta Crystallogr. D Biol. Crystallogr., 59, 2023, 10.1107/S0907444903017694 · DOI
  7. Emsley, 2004, Coot: model-building tools for molecular graphics, Acta Crystallogr. D Biol. Crystallogr., 60, 2126, 10.1107/S0907444904019158 · DOI · Paper page
  8. Endo, 2000, STAM2, a new member of the STAM family, binding to the Janus kinases, FEBS Lett., 477, 55, 10.1016/S0014-5793(00)01760-9 · DOI
  9. Garcia de la Torre, 2000, Calculation of hydrodynamic properties of globular proteins from their atomic-level structure, Biophys. J., 78, 719, 10.1016/S0006-3495(00)76630-6 · DOI
  10. Hicke, 2005, Ubiquitin-binding domains, Nat. Rev. Mol. Cell Biol., 6, 610, 10.1038/nrm1701 · DOI
  11. Hirano, 2006, Double-sided ubiquitin binding of Hrs-UIM in endosomal protein sorting, Nat. Struct. Mol. Biol., 13, 272, 10.1038/nsmb1051 · DOI
  12. Hoeller, 2006, Regulation of ubiquitin-binding proteins by monoubiquitination, Nat. Cell Biol., 8, 163, 10.1038/ncb1354 · DOI
  13. Hurley, 2008, ESCRT complexes and the biogenesis of multivesicular bodies, Curr. Opin. Cell Biol., 20, 4, 10.1016/j.ceb.2007.12.002 · DOI
  14. Hurley, 2006, Ubiquitin binding domains, Biochem. J., 399, 361, 10.1042/BJ20061138 · DOI
  15. Im, 2008, Integrated structural model and membrane targeting mechanism of the human ESCRT-II complex, Dev. Cell, 14, 902, 10.1016/j.devcel.2008.04.004 · DOI
  16. Kabsch, 1993, Automatic processing of rotation diffraction data from crystals of initially unknown symmetry and cell constants, J. Appl. Crystallogr., 26, 795, 10.1107/S0021889893005588 · DOI
  17. Kanazawa, 2003, Effects of deficiencies of STAMs and Hrs, mammalian class E Vps proteins, on receptor downregulation, Biochem. Biophys. Res. Commun., 309, 848, 10.1016/j.bbrc.2003.08.078 · DOI · Paper page
  18. Katzmann, 2003, Vps27 recruits ESCRT machinery to endosomes during MVB sorting, J. Cell Biol., 162, 413, 10.1083/jcb.200302136 · DOI
  19. Kim, 2008, Coarse-grained models for simulations of multiprotein complexes: application to ubiquitin binding, J. Mol. Biol., 375, 1416, 10.1016/j.jmb.2007.11.063 · DOI
  20. Kirkin, 2007, Role of ubiquitin- and Ubl-binding proteins in cell signaling, Curr. Opin. Cell Biol., 19, 199, 10.1016/j.ceb.2007.02.002 · DOI
  21. Kostelansky, 2007, Molecular architecture and functional model of the complete yeast ESCRT-I heterotetramer, Cell, 129, 485, 10.1016/j.cell.2007.03.016 · DOI · Paper page
  22. Langer, 2008, Automated macromolecular model building for X-ray crystallography using ARP/wARP version 7, Nat. Protocols, 3, 1171, 10.1038/nprot.2008.91 · DOI · Paper page
  23. Lebowitz, 2002, Modern analytical ultracentrifugation in Prot. Sci.: A tutorial review, Protein Sci., 11, 2067, 10.1110/ps.0207702 · DOI
  24. Leung, 2008, Evolution of the multivesicular body ESCRT machinery; retention across the eukaryotic lineage, Traffic, 9, 1698, 10.1111/j.1600-0854.2008.00797.x · DOI
  25. Lloyd, 2002, Hrs regulates endosome membrane invagination and tyrosine kinase receptor signaling in Drosophila, Cell, 108, 261, 10.1016/S0092-8674(02)00611-6 · DOI · Paper page
  26. Lu, 2003, TSG101 interaction with HRS mediates endosomal trafficking and receptor down-regulation, Proc. Natl. Acad. Sci. USA, 100, 7626, 10.1073/pnas.0932599100 · DOI · Paper page
  27. Mao, 2000, Crystal structure of the VHS and FYVE tandem domains of Hrs, a protein involved in membrane trafficking and signal transduction, Cell, 100, 447, 10.1016/S0092-8674(00)80680-7 · DOI
  28. McCullough, 2006, Activation of the endosome-associated ubiquitin isopeptidase AMSH by STAM, a component of the multivesicular body-sorting machinery, Curr. Biol., 16, 160, 10.1016/j.cub.2005.11.073 · DOI
  29. Misra, 2001, Recognizing phosphatidylinositol 3-phosphate, Cell, 107, 559, 10.1016/S0092-8674(01)00594-3 · DOI
  30. Mizuno, 2003, STAM proteins bind ubiquitinated proteins on the early endosome via the VHS domain and ubiquitin-interacting motif, Mol. Biol. Cell, 14, 3675, 10.1091/mbc.E02-12-0823 · DOI
  31. Mizuno, 2004, Association with Hrs is required for the early endosomal localization, stability, and function of STAM, J. Biochem., 135, 385, 10.1093/jb/mvh046 · DOI
  32. Murshudov, 1999, Efficient anisotropic refinement of macromolecular structures using FFT, Acta Crystallogr. D Biol. Crystallogr., 55, 247, 10.1107/S090744499801405X · DOI
  33. Nickerson, 2007, A concentric circle model of multivesicular body cargo sorting, EMBO Rep., 8, 644, 10.1038/sj.embor.7401004 · DOI
  34. Piper, 2007, Ubiquitin-dependent sorting of integral membrane proteins for degradation in lysosomes, Curr. Opin. Cell Biol., 19, 459, 10.1016/j.ceb.2007.07.002 · DOI · Paper page
  35. Pornillos, 2003, HIV Gag mimics the Tsg101-recruiting activity of the human Hrs protein, J. Cell Biol., 162, 425, 10.1083/jcb.200302138 · DOI
  36. Prag, 2007, The Vps27/Hse1 complex is a GAT domain-based scaffold for ubiquitin-dependent sorting, Dev. Cell, 12, 973, 10.1016/j.devcel.2007.04.013 · DOI
  37. Pullan, 2006, The endosome-associated protein Hrs is hexameric and controls cargo sorting as a “master molecule”, Structure, 14, 661, 10.1016/j.str.2006.01.012 · DOI
  38. Raiborg, 2001, FYVE and coiled-coil domains determine the specific localisation of Hrs to early endosomes, J. Cell Sci., 114, 2255, 10.1242/jcs.114.12.2255 · DOI
  39. Raiborg, 2002, Hrs sorts ubiquitinated proteins into clathrin-coated microdomains of early endosomes, Nat. Cell Biol., 4, 394, 10.1038/ncb791 · DOI · Paper page
  40. Ren, 2007, Hse1, a component of the yeast Hrs-STAM ubiquitin sorting complex, associates with ubiquitin peptidases and a ligase to control sorting efficiency into multivesicular bodies, Mol. Biol. Cell, 18, 324, 10.1091/mbc.E06-06-0557 · DOI · Paper page
  41. Row, 2006, The ubiquitin isopeptidase UBPY regulates endosomal ubiquitin dynamics and is essential for receptor down-regulation, J. Biol. Chem., 281, 12618, 10.1074/jbc.M512615200 · DOI · Paper page
  42. Roxrud, 2008, An endosomally localized isoform of Eps15 interacts with Hrs to mediate degradation of epidermal growth factor receptor, J. Cell Biol., 180, 1205, 10.1083/jcb.200708115 · DOI
  43. Schneider, 2002, Substructure solution with SHELXD, Acta Crystallogr. D Biol. Crystallogr., 58, 1772, 10.1107/S0907444902011678 · DOI
  44. Schuck, 2003, On the analysis of protein self-association by sedimentation velocity analytical ultracentrifugation, Anal. Biochem., 320, 104, 10.1016/S0003-2697(03)00289-6 · DOI
  45. Sheffield, 1999, Overcoming expression and purification problems of RhoGDI using a family of “parallel” expression vectors, Protein Expr. Purif., 15, 34, 10.1006/prep.1998.1003 · DOI
  46. Shih, 2002, Epsins and Vps27p/Hrs contain ubiquitin-binding domains that function in receptor endocytosis, Nat. Cell Biol., 4, 389, 10.1038/ncb790 · DOI
  47. Stahelin, 2002, Phosphatidylinositol 3-phosphate induces the membrane penetration of the FYVE domains of Vps27p and Hrs, J. Biol. Chem., 277, 26379, 10.1074/jbc.M201106200 · DOI
  48. Studier, 2005, Protein production by auto-induction in high-density shaking cultures, Protein Expr. Purif., 41, 207, 10.1016/j.pep.2005.01.016 · DOI
  49. Tan, 2001, A modular polycistronic expression system for overexpressing protein complexes in Escherichia coli, Protein Expr. Purif., 21, 224, 10.1006/prep.2000.1363 · DOI
  50. Terwilliger, 2003, Automated main-chain model building by template matching and iterative fragment extension, Acta Crystallogr. D Biol. Crystallogr., 59, 38, 10.1107/S0907444902018036 · DOI
  51. Williams, 2007, The emerging shape of the ESCRT machinery, Nat. Rev. Mol. Cell Biol., 8, 355, 10.1038/nrm2162 · DOI
  52. Winn, 2001, Use of TLS parameters to model anisotropic displacements in macromolecular refinement, Acta Crystallogr. D Biol. Crystallogr., 57, 122, 10.1107/S0907444900014736 · DOI

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Metadata

Authors
Ren, X., Kloer, D. P., Kim, Y. C., Ghirlando, R., Saidi, L. F., Hummer, G., & Hurley, J. H.
Venue
Structure
Publisher
Elsevier BV
Published
2009-03
Volume
17
Issue
3
Pages
406-416
ISSN
0969-2126
Cited by
72
References
1
Language
en

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