CoChat
Sign Up
Cited by 73

The DOI matches its Crossref record; 1 of the 1 references it cites were found in a registry or an index.

RNAi protects the Caenorhabditis elegans germline against transposition

Vastenhouw, Nadine L., Plasterk, Ronald H.A.·2004·Trends in Genetics
DOI 10.1016/j.tig.2004.04.011
Open this paper in CoChat — free account

Overview

Integrity signals

Registry

Crossref · 10.1016/j.tig.2004.04.011

Cites

1 of 1 references verified0 citation errors · 0 not checkable

Statistics

Recomputing p-values needs the paper’s full text.

Verification

Claims the paper makes

We couldn’t retrieve this paper’s full text, so its claims and self-check weren’t run. The registry and citation checks still apply.

Claims other papers make about this one

Each is checked against this paper’s own text: does it say what the citing paper says it does?

Citations

Cites

Flagged first, then by citations

Show all 1 references

Research works printed but not linked: 56

  1. Lander, 2001, Initial sequencing and analysis of the human genome, Nature, 409, 860, 10.1038/35057062 · DOI · Paper page
  2. 1998, Genome sequence of the nematode C. elegans: a platform for investigating biology, Science, 282, 2012, 10.1126/science.282.5396.2012 · DOI
  3. Fischer, 2003, Continuous exchange of sequence information between dispersed Tc1 transposons in the Caenorhabditis elegans genome, Genetics, 164, 127, 10.1093/genetics/164.1.127 · DOI
  4. Plasterk, 1999, Resident aliens: the Tc1/mariner superfamily of transposable elements, Trends Genet., 15, 326, 10.1016/S0168-9525(99)01777-1 · DOI
  5. Plasterk, 1991, The origin of footprints of the Tc1 transposon of Caenorhabditis elegans, EMBO J., 10, 1919, 10.1002/j.1460-2075.1991.tb07718.x · DOI
  6. Plasterk, R. and H. and Groenen, J.T. (1992) Targeted alterations of the Caenorhabditis elegans genome by transgene instructed DNA double strand break repair following Tc1 excision. EMBO J. 11, 287–290. · DOI
  7. Vos, 1996, Transposase is the only nematode protein required for in vitro transposition of Tc1, Genes Dev., 10, 755, 10.1101/gad.10.6.755 · DOI
  8. Lampe, 1996, A purified mariner transposase is sufficient to mediate transposition in vitro, EMBO J., 15, 5470, 10.1002/j.1460-2075.1996.tb00930.x · DOI
  9. Tosi, L. and R. and Beverley, S.M. (2000) cis and trans factors affecting Mos1 mariner evolution and transposition in vitro, and its potential for functional genomics. Nucleic Acids Res. 28, 784–790. · DOI
  10. Raz, 1998, Transposition of the nematode Caenorhabditis elegans Tc3 element in the zebrafish Danio rerio, Curr. Biol., 8, 82, 10.1016/S0960-9822(98)70038-7 · DOI
  11. Schouten, 1998, Transposon Tc1 of the nematode Caenorhabditis elegans jumps in human cells, Nucleic Acids Res., 26, 3013, 10.1093/nar/26.12.3013 · DOI
  12. Emmons, S. and W. and Yesner, L. (1984) High-frequency excision of transposable element Tc1 in the nematode Caenorhabditis elegans is limited to somatic cells. Cell 36, 599–605. · DOI
  13. Ketting, 1999, Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD, Cell, 99, 133, 10.1016/S0092-8674(00)81645-1 · DOI
  14. Tabara, 1999, The rde-1 gene, RNA interference, and transposon silencing in C. elegans, Cell, 99, 123, 10.1016/S0092-8674(00)81644-X · DOI
  15. Tabara, 2002, The dsRNA binding protein RDE-4 interacts with RDE-1, DCR-1, and a DExH- box helicase to direct RNAi in C. elegans, Cell, 109, 861, 10.1016/S0092-8674(02)00793-6 · DOI
  16. Ketting, 2001, Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans, Genes Dev., 15, 2654, 10.1101/gad.927801 · DOI · Paper page
  17. Bernstein, 2001, Role for a bidentate ribonuclease in the initiation step of RNA interference, Nature, 409, 363, 10.1038/35053110 · DOI
  18. Knight, 2001, A role for the RNase III enzyme DCR-1 in RNA interference and germ line development in Caenorhabditis elegans, Science, 293, 2269, 10.1126/science.1062039 · DOI
  19. Grishok, 2001, Genes and mechanisms related to RNA interference regulate expression of the small temporal RNAs that control C. elegans developmental timing, Cell, 106, 23, 10.1016/S0092-8674(01)00431-7 · DOI · Paper page
  20. Hammond, 2000, An RNA-directed nuclease mediates post-transcriptional gene silencing in Drosophila cells, Nature, 404, 293, 10.1038/35005107 · DOI
  21. Sijen, 2003, Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi, Nature, 426, 310, 10.1038/nature02107 · DOI
  22. Ambros, 2003, MicroRNAs and other tiny endogenous RNAs in C. elegans, Curr. Biol., 13, 807, 10.1016/S0960-9822(03)00287-2 · DOI · Paper page
  23. Smardon, 2000, EGO-1 is related to RNA-directed RNA polymerase and functions in germ-line development and RNA interference in C. elegans, Curr. Biol., 10, 169, 10.1016/S0960-9822(00)00323-7 · DOI
  24. Sijen, 2001, On the role of RNA amplification in dsRNA-triggered gene silencing, Cell, 107, 465, 10.1016/S0092-8674(01)00576-1 · DOI
  25. Tijsterman, 2002, RNA helicase MUT-14-dependent gene silencing triggered in C. elegans by short antisense RNAs, Science, 295, 694, 10.1126/science.1067534 · DOI
  26. Vastenhouw, 2003, A genome-wide screen identifies 27 genes involved in transposon silencing in C. elegans, Curr. Biol., 13, 1311, 10.1016/S0960-9822(03)00539-6 · DOI
  27. Djikeng, 2003, An siRNA ribonucleoprotein is found associated with polyribosomes in Trypanosoma brucei, RNA, 9, 802, 10.1261/rna.5270203 · DOI
  28. Zimmermann, 2003, The double life of ribosomal proteins, Cell, 115, 130, 10.1016/S0092-8674(03)00804-3 · DOI
  29. Carmell, 2002, The Argonaute family: tentacles that reach into RNAi, developmental control, stem cell maintenance, and tumorigenesis, Genes Dev., 16, 2733, 10.1101/gad.1026102 · DOI
  30. Verdel, 2004, RNAi-mediated targeting of heterochromatin by the RITS complex, Science, 303, 672, 10.1126/science.1093686 · DOI
  31. Yan, 2003, Structure and conserved RNA binding of the PAZ domain, Nature, 426, 468, 10.1038/nature02129 · DOI
  32. Song, 2003, The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes, Nat. Struct. Biol., 10, 1026, 10.1038/nsb1016 · DOI
  33. Hammond, 2001, Argonaute2, a link between genetic and biochemical analyses of RNAi, Science, 293, 1146, 10.1126/science.1064023 · DOI · Paper page
  34. Martinez, 2002, Single-stranded antisense siRNAs guide target RNA cleavage in RNAi, Cell, 110, 563, 10.1016/S0092-8674(02)00908-X · DOI
  35. Tijsterman, 2002, PPW-1, a PAZ/PIWI protein required for efficient germline RNAi, is defective in a natural isolate of C. elegans, Curr. Biol., 12, 1535, 10.1016/S0960-9822(02)01110-7 · DOI
  36. Schramke, 2003, Hairpin RNAs and retrotransposon LTRs effect RNAi and chromatin-based gene silencing, Science, 301, 1069, 10.1126/science.1086870 · DOI
  37. Singer, 2001, Robertson's Mutator transposons in A. thaliana are regulated by the chromatin-remodeling gene Decrease in DNA Methylation (DDM1), Genes Dev., 15, 591, 10.1101/gad.193701 · DOI
  38. Miura, 2001, Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis, Nature, 411, 212, 10.1038/35075612 · DOI
  39. Jiang, 2002, Transcriptional cosuppression of yeast Ty1 retrotransposons, Genes Dev., 16, 467, 10.1101/gad.923502 · DOI
  40. Collins, 1987, Activation of a transposable element in the germ-line but not the soma of Caenorhabditis elegans, Nature, 328, 726, 10.1038/328726a0 · DOI
  41. Voinnet, 2001, RNA silencing as a plant immune system against viruses, Trends Genet., 17, 449, 10.1016/S0168-9525(01)02367-8 · DOI
  42. Mori, 1990, Interstrain crosses enhance excision of Tc1 transposable elements in Caenorhabditis elegans, Mol. Gen. Genet., 220, 251, 10.1007/BF00260490 · DOI
  43. Jensen, 1999, Taming of transposable elements by homology-dependent gene silencing, Nat. Genet., 21, 209, 10.1038/5997 · DOI
  44. Gauthier, 2000, Artificial and epigenetic regulation of the I factor, a nonviral retrotransposon of Drosophila melanogaster, Genetics, 156, 1867, 10.1093/genetics/156.4.1867 · DOI
  45. Malinsky, 2000, New insights on homology-dependent silencing of I factor activity by transgenes containing ORF1 in Drosophila melanogaster, Genetics, 156, 1147, 10.1093/genetics/156.3.1147 · DOI
  46. Ambros, 2001, microRNAs: tiny regulators with great potential, Cell, 107, 823, 10.1016/S0092-8674(01)00616-X · DOI
  47. Lee, 2002, MicroRNA maturation: stepwise processing and subcellular localization, EMBO J., 21, 4663, 10.1093/emboj/cdf476 · DOI
  48. Lee, 2003, The nuclear RNase III Drosha initiates microRNA processing, Nature, 425, 415, 10.1038/nature01957 · DOI
  49. Wu-Scharf, 2000, Transgene and transposon silencing in Chlamydomonas reinhardtii by DEAH-Box RNA helicase, Science, 290, 1159, 10.1126/science.290.5494.1159 · DOI
  50. Djikeng, 2001, RNA interference in Trypanosoma brucei: cloning of small interfering RNAs provides evidence for retroposon-derived 24-26 nucleotide RNAs, RNA, 7, 1522
  51. Aravin, 2001, Double-stranded RNA-mediated silencing of genomic tandem repeats and transposable elements in the D. melanogaster germline, Curr. Biol., 11, 1017, 10.1016/S0960-9822(01)00299-8 · DOI
  52. Rudenko, 2003, Initiation of silencing of maize MuDR/Mu transposable elements, Plant J., 33, 1013, 10.1046/j.1365-313X.2003.01683.x · DOI
  53. Lippman, 2003, Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification, PLoS Biol, 1, E67, 10.1371/journal.pbio.0000067 · DOI · Paper page
  54. Okamoto, 2001, Silencing of transposable elements in plants, Trends Plant Sci., 6, 527, 10.1016/S1360-1385(01)02105-7 · DOI
  55. Mette, 2000, Transcriptional silencing and promoter methylation triggered by double-stranded RNA, EMBO J., 19, 5194, 10.1093/emboj/19.19.5194 · DOI
  56. Sijen, 2001, Transcriptional and posttranscriptional gene silencing are mechanistically related, Curr. Biol., 11, 436, 10.1016/S0960-9822(01)00116-6 · DOI

Cited by

Sorted by citations

See all 73

Metadata

Authors
Vastenhouw, N. L., & Plasterk, R. H. A.
Venue
Trends in Genetics
Publisher
Elsevier BV
Published
2004-07
Volume
20
Issue
7
Pages
314-319
ISSN
0168-9525
DOI
10.1016/j.tig.2004.04.011
Cited by
73
References
1
Language
en
Licence
www.elsevier.com/tdm/userlicense/1.0/ (tdm)

About these checks

Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.

Statistics and arithmetic are recomputed, not judged.

Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.

What counts as a claim ›How we measure confidence ›How we check this ›

Are you an author, or do you see a problem with this page? Request a review