Perspective on the Current State-of-the-Art of Quantum Computing for Drug Discovery Applications
Open accessAbstract
Computational chemistry is an essential tool in the pharmaceutical industry. Quantum computing is a fast evolving technology that promises to completely shift the computational capabilities in many areas of chemical research by bringing into reach currently impossible calculations. This perspective illustrates the near-future applicability of quantum computation of molecules to pharmaceutical problems. We briefly summarize and compare the scaling properties of state-of-the-art quantum algorithms and provide novel estimates of the quantum computational cost of simulating progressively larger embedding regions of a pharmaceutically relevant covalent protein-drug complex involving the drug Ibrutinib. Carrying out these calculations requires an error-corrected quantum architecture that we describe. Our estimates showcase that recent developments on quantum phase estimation algorithms have dramatically reduced the quantum resources needed to run fully quantum calculations in active spaces of around 50 orbitals and electrons, from estimated over 1000 years using the Trotterization approach to just a few days with sparse qubitization, painting a picture of fast and exciting progress in this nascent field.
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SpinQ Technology developed the first desktop quantum computer with a high-speed processor.
“Recently, a startup company from China known as SpinQ Technology informed about the development of the first-desktop quantum computer with a high-speed processor [8, 19, 38, 39].”
From Quantum Computing in the Next-Generation Computational Biology Landscape: From Protein Folding to Molecular Dynamics (2024) · cites this paper as [39]
The Introduction discusses quantum hardware from Google, USTC and IBM, but does not mention SpinQ Technology. Searches for SpinQ, a desktop quantum computer and a high-speed processor found no passage in our copy addressing the claimed development. (LLM, conf=0.74)
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The Variational Quantum Eigensolver: A review of methods and best practices
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“Finding accurate solutions to the electronic structure problem is of great importance to various industries, from modeling pharmaceutical drug docking [1], to designing new materials for light harvesting and CO2 reduction [2], to elucidating reaction mechanisms in novel battery materials [3].”
BackgroundDrug Design and Disease Diagnosis: The Potential of Deep Learning Models in Biology
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“Quantum computing holds transformative potential for the field of drug discovery, offering unprecedented capabilities in simulating molecular interactions and accelerating the design of new pharmaceuticals [11,28,29].”
BackgroundQuantum computing in bioinformatics: a systematic review mapping
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“[5] is a review of articles on drug discovery.”
BackgroundBlock-encoding structured matrices for data input in quantum computing
Sünderhauf, C., Campbell, E. T., & Camps, J. (2024) · Quantum · doi:10.22331/q-2024-01-11-1226 · Cited by 50 · see citing works
“Not all gates are equal in error correction codes, rather, in the popular surface codes [24], so-called T gates and Toffoli gates (which can be reexpressed with T gates) are much more expensive than Clifford gates [25–29].”
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“While VQE might have its merits in certain use cases, it appears the emerging consensus is that QPE has a superior scaling with the system size [1, 55].”
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“15 Zinner et al. reported that quantum algorithms can be used on machines to study pharmaceutical designs.”
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Statistical Phase Estimation and Error Mitigation on a Superconducting Quantum Processor
Blunt, N. S., Caune, L., Izsák, R., Campbell, E. T., & Holzmann, N. (2023) · PRX Quantum · doi:10.1103/prxquantum.4.040341 · Cited by 27 · see citing works
Self-citationBettanti, A., Beccari, A. R., & Biccarino, M. (2024) · Discover Artificial Intelligence · doi:10.1007/s44163-024-00188-3 · Cited by 21 · see citing works
“The advent of quantum computing is poised to revolutionize AIDD, offering the potential to significantly enhance the speed, accuracy, and scope of pharmaceutics [134, 135].”
Nature meets machine: the AI renaissance in natural product drug discovery
Muthuraj, R., & Chandrasekaran, J. (2026) · Natural Products and Bioprospecting · doi:10.1007/s13659-025-00589-6 · Cited by 24 · see citing works
“This same cost barrier will likely apply to early implementations of quantum-enhanced methods until more efficient hybrid solutions are developed [175].”
Modeling Heterogeneous Catalysis Using Quantum Computers: An Academic and Industry Perspective
Hariharan, S., Kinge, S., & Visscher, L. (2024) · Journal of Chemical Information and Modeling · doi:10.1021/acs.jcim.4c01212 · Cited by 20 · see citing works
Quantum simulations of chemistry in first quantization with any basis set
Georges, T. N., Bothe, M., Sünderhauf, C., Berntson, B. K., Izsák, R., & Ivanov, A. V. (2025) · npj Quantum Information · doi:10.1038/s41534-025-00987-1 · Cited by 21 · see citing works
“Speci fi cally,QPEwith qubitization is the leading approach 14 – 16 whichrequires the lowest quantum resources for quantum chemistry problems 2,8,17 – 19 .”
Self-citationHow generative Artificial Intelligence can transform drug discovery?
Jusoh, A. S., Remli, M. A., Mohamad, M. S., Cazenave, T., & Fong, C. (2025) · European Journal of Medicinal Chemistry · doi:10.1016/j.ejmech.2025.117825 · Cited by 21 · see citing works
“Furthermore, the exploration of novel generative architectures, particularly diffusion models [146,147], could revolutionize the field of Generative AI for drug discovery.”
Atomic Quantum Technologies for Quantum Matter and Fundamental Physics Applications
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Computational strategies for antimicrobial discovery: From machine learning to multiscale simulation
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Towards Building Quantum Resistant Blockchain
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“The introduction of Shor’s algorithm [8], which can factorize primes in O ( √ N ) time compared to classical computers’ O ( N ) time [5, 8], has raised concerns about the vulnerability of classical cryptography, particularly in key generation methods.”
BackgroundQuantum intelligence in drug discovery: Advancing insights with quantum machine learning
Danishuddin, Haque, M. A., Kumar, V., Khan, S. N., & Kim, J.-J. (2025) · Drug Discovery Today · doi:10.1016/j.drudis.2025.104463 · Cited by 15 · see citing works
Quantum Molecular Docking with a Quantum-Inspired Algorithm
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“Quantum computing, for example, is emerging as a possible adjunct to speed up the discovery process (Li et al., 2024; Kumar et al., 2024; Blunt et al., 2022).”
Reducing Entanglement with Physically Inspired Fermion-To-Qubit Mappings
Parella-Dilmé, T., Kottmann, K., Zambrano, L., Mortimer, L., Kottmann, J. S., & Acín, A. (2024) · PRX Quantum · doi:10.1103/prxquantum.5.030333 · Cited by 14 · see citing works
“Electronic structure ab-initio quantum chemistry simulations play a pivotal role in various fields, including drug development [1, 2], computational catalysis [3], and material science [4].”
Quantum-machine-assisted drug discovery
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“In this setting, quantum subroutines can capture subtle electronic changes that classical fixed-charge force fields must approximate, with proof-of-concept studies reported for catalytic motifs in viral proteases and metalloenzymes [66, 67].”
InfluentialQuantum simulation of preferred tautomeric state prediction
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Compilation of a simple chemistry application to quantum error correction primitives
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“These physical error rates are commonly used when estimating the resource requirements of fault-tolerant quantum algorithms [4, 12, 19].”
BackgroundSelf-citationAccurate quantum-centric simulations of intermolecular interactions
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“Further examplesofsimulationsthatcouldbeenabledbyourapproachinclude quantumcomputingsimulationsofchemicalreactivityof CO 2 - fi xating ruthenium catalyst proposed by Burg et al. 83 , Ibrutinib drug simulations proposed by Blunt et al. 84 , and the drug-discovery work fl ows proposed by Pyrkov et al. 85 and Kumar et al.…”
What is the plausibility that all drugs will be designed by computers by the end of the decade?
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“Emerging technologies such as quantum computing [14,15] are anticipated to continue playing a pivotal role in selecting and identifying hits, their development, and rational drug repurposing.”
BackgroundReAIM: A ReRAM-based Adaptive Ising Machine for Solving Combinatorial Optimization Problems
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“The Ising machine (IM) is a quantum-inspired system with promising capabilities in solving 1 combinatorial optimization problems (COPs) [1], [37], [40], [50], widely applied in finance [47], drug development [8], and logistics [42].”
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“13 Considering such rapid progress in quantum hardware, the research of the FTQC algorithms is an urgent issue.”
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Position Papers for the ASCR Workshop on Basic Research Needs in Quantum Computing and Networking
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“In contrast, quantum computers operating with principles of quantum mechanics are particularly well-suited for simulating molecular quantum phenomena in the fields of catalysis, materials research, and drug discovery [15–17].”
BackgroundMitigating Errors on Superconducting Quantum Processors Through Fuzzy Clustering
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Metrics for spin-based computing
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“Common COPs include resource allocation 138 , scheduling 139 , graph partitioning 140,141 , drug design 142,143 , routing in logistics 144,145 , designing efficient networks 146 , and even enhancing machine learning and artificial intelligence models 147,148 .”
A fault-tolerant variational quantum algorithm with limited T-depth
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A Review on Smart Healthcare Employing Quantum Internet of Things
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Unveiling Advanced Computational Applications in Quantum Computing: A Comprehensive Review
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Quantum Internet of Things for Smart Healthcare
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Challenges and opportunities in quantum computing in healthcare
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“Quantum computers are particularly suitable for simulating structure and properties in the areas of catalysis, materials research, and drug discovery [15–17].”
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Self-citationQuantum Computing in Drug Discovery
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Molecular Symmetry in VQE: A Dual Approach for Trapped-Ion Simulations of Benzene
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A brief review on quantum computing based drug design
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“Although quantum computing has made computational chemistry (a tool for drug design) more advanced and faster (Blunt et al., 2022), the applications of quantum computing in drug design and discovery are still at a very nascent research stage.”
Enhancing the electron pair approximation with measurements on trapped-ion quantum computers
Zhao, L., Wang, Q., Goings, J. J., Shin, K., Kyoung, W., Noh, S., Rhee, Y. M., & Kim, K. (2024) · npj Quantum Information · doi:10.1038/s41534-024-00871-4 · Cited by 6 · see citing works
“Published in partnership with The University of New South Wales https://doi.org/10.1038/s41534-024-00871-4 Enhancing the electron pair approximation with measurements on trapped-ion quantum computers”
InfluentialAb initio extended Hubbard model of short polyenes for efficient quantum computing
Yoshida, Y., Takemori, N., & Mizukami, W. (2024) · The Journal of Chemical Physics · doi:10.1063/5.0213525 · Cited by 6 · see citing works
QUASIM: Quantum Computing Enhanced Service Ecosystem for Simulation in Manufacturing
Maaß, W., Agrawal, A., Ciani, A., Danz, S., Delgadillo, A., Ganser, P., Kienast, P., Kulig, M., König, V., Rodellas-Gràcia, N., et al. (2024) · Künstliche Intell. · doi:10.1007/s13218-024-00860-x · Cited by 6 · see citing works
“Quantum computing technologies are evaluated in various domains, such as finance [27], production [7], chemical modeling [52], and drug design [15].”
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Quantum Computing and Its Promise in Drug Discovery
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Scalable narrow linewidth high power laser for barium ion optical qubits
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Distributed Quantum Error Correction Based on Hyperbolic Floquet Codes
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“These codes enable reliable operations in the presence of noise, at the cost of requiring thousands or even millions of physical qubits for industrially relevant applications [3]–[7].”
Self-citationExtending quantum computing through subspace, embedding and classical molecular dynamics techniques
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Modern Drug Research and Its Impact on Pharmaceutical Industries
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Research and Application of Quantum Computing Algorithm for Asset Portfolio Optimization
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Self-citationUnfolding Post-Quantum Cryptosystems: CRYSTALS-Dilithium, McEliece, BIKE, and HQC
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Quantum computing applications in biology
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Quantum Computer Simulation of Protein Protonation
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Solvent Distribution Effects on Quantum Chemical Calculations with Quantum Computers
Yoshida, Y., Mizukami, W., & Yoshida, N. (2024) · Journal of Chemical Theory and Computation · doi:10.1021/acs.jctc.3c01189 · Cited by 5 · see citing works
Quantum computing in Healthcare 5.0
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Unified framework for matchgate classical shadows
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“Understanding the physics of correlated electronic systems is crucial for quantum chemistry [1–3] and condensed matter physics [4, 5], with potential far-reaching applications in drug discovery [6], chemical engineering [7] and material science [8].”
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The Second Quantum Revolution: Unexplored Facts and Latest News
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“The ability to model atomic interactions with unprecedented precision accelerates the development of new materials and drugs, thus reducing the time and costs associated with research and development [104].”
BackgroundQuantum Computational Concepts and Approaches in Drug Discovery, Development and Delivery
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Challenges and Advances in the Simulation of Targeted Covalent Inhibitors Using Quantum Computing
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Application of artificial intelligence in the development of circular bioeconomy
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RobQFL: Robust Quantum Federated Learning in Adversarial Environment
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“Proof-of-concepts already span diverse areas—from cancer diagnosis [10], [11] and drug discovery [12] to finance [13]–[23], and cybersecurity [24]—showing QML’s broad practical reach.”
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Quantum Computing Approach to Fixed-Node Monte Carlo Using Classical Shadows
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The Quantum Computing Paradigm
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Treespilation: Architecture- and State-Optimised Fermion-to-Qubit MappingsPreprint
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- Authors
- Blunt, N. S., Camps, J., Crawford, O., Izsák, R., Leontica, S., Mirani, A., Moylett, A. E., Scivier, S. A., Sünderhauf, C., Schopf, P., Taylor, J. M., & Holzmann, N.
- Affiliations
- Riverlane (United Kingdom) (GB)
- Astex Pharmaceuticals, 436 Cambridge Science Park, Cambridge CB4 0QA, United Kingdom
- Corresponding author
- Holzmann, Nicole
- ORCID
- Venue
- Journal of Chemical Theory and Computation
- Publisher
- American Chemical Society (ACS)
- Published
- 2022-11-10
- Volume
- 18
- Issue
- 12
- Pages
- 7001-7023
- ISSN
- 1549-9618 (ISSN-L)
- 1549-9626
- PMC
- PMC9753588
- OpenAlex
- W4308683072
- Cited by
- 192
- References
- 166
- Citations by year
- 2026: 40 · 2025: 59 · 2024: 60 · 2023: 29 · 2022: 3
- FWCI
- 2.63
- Type
- journal article
- Language
- en
- Open access
- hybrid
- doi.org
- Locations
- Journal of Chemical Theory and Computation (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- arXiv (Cornell University) (submittedVersion)
- arXiv (Cornell University)
- Funders
- Astex Pharmaceuticals
- Innovate UK (105622)
- Topics
- Physical Sciences › Computer Science › Artificial Intelligence › Quantum Computing Algorithms and Architecture
- Physical Sciences › Physics and Astronomy › Atomic and Molecular Physics, and Optics › Advanced Chemical Physics Studies
- Physical Sciences › Computer Science › Computational Theory and Mathematics › Computational Drug Discovery Methods
- Keywords
- quantum computing, drug discovery, quantum chemistry, quantum phase estimation, Trotterization, protein-drug complexes, ibrutinib, quantum algorithms
- MeSH terms
- Computing Methodologies, Pharmaceutical Preparations, Electrons, Quantum Theory, Drug Discovery
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