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OCRL controls trafficking through early endosomes via PtdIns4,5P2‐dependent regulation of endosomal actin

Vicinanza, Mariella, Di Campli, Antonella, Polishchuk, Elena, Santoro, Michele, Di Tullio, Giuseppe, Godi, Anna, Levtchenko, Elena, De Leo, Maria Giovanna, Polishchuk, Roman, Sandoval, Lisette, Marzolo, Maria‐Paz, De Matteis, Maria Antonietta·2011·The EMBO Journal

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Crossref · 10.1038/emboj.2011.354

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  • Other PI(4,5)P2 phosphatases and kinases impact trafficking and degradation of the epidermal growth factor receptor and the transferrin receptor.

    “Notably, other PI(4,5)P2 phosphatases (e.g. Lowe oculocerebrorenal syndrome protein (OCRL), also known as INPP5F) and kinases have been reported to impact trafficking and degradation of the epidermal growth factor receptor and the transferrin receptor, which are recycled and degraded in a manner similar to LDLR11–13.”

    From Phosphatidylinositol-(4,5)-Bisphosphate Regulates Plasma Cholesterol Through LDL (Low-Density Lipoprotein) Receptor Lysosomal Degradation (2020) · cites this paper as [11]

    The Results section reports that OCRL depletion slows transferrin-receptor recycling and delays EGFR degradation. It also reports that reducing PIP5K levels affects transferrin uptake, but does not show a kinase effect on EGFR degradation or transferrin-receptor degradation. The cited paper therefore supports the trafficking claim, not all of its stated degradation effects. (LLM, conf=0.84)

    Experimental — accuracy not yet measured
  • OCRL is a phosphatase that converts PI(4,5)P2 to PI4P.

    “OCRL is a phosphatase that converts PI(4,5)P2 to PI4P11, 36.”

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Research works printed but not linked: 77

  1. Addis M, Loi M, Lepiani C, Cau M, Melis MA (2004) OCRL mutation analysis in Italian patients with Lowe syndrome. Hum Mutat 23: 524–525 · DOI
  2. Allen PG (2003) Actin filament uncapping localizes to ruffling lamellae and rocketing vesicles. Nat Cell Biol 5: 972–979 · DOI
  3. Arber S, Barbayannis FA, Hanser H, Schneider C, Stanyon CA, Bernard O, Caroni P (1998) Regulation of actin dynamics through phosphorylation of cofilin by LIM‐kinase. Nature 393: 805–809 · DOI
  4. Attree O, Olivos IM, Okabe I, Bailey LC, Nelson DL, Lewis RA, McInnes RR, Nussbaum RL (1992) The Lowe's oculocerebrorenal syndrome gene encodes a protein highly homologous to inositol polyphosphate‐5‐phosphatase. Nature 358: 239–242 · DOI
  5. Ben El Kadhi K, Roubinet C, Solinet S, Emery G, Carreno S (2011) The Inositol 5‐Phosphatase dOCRL Controls PI (4,5) P2 Homeostasis and Is Necessary for Cytokinesis. Curr Biol 21: 1074–1079 · DOI
  6. Benesch S, Polo S, Lai FP, Anderson KI, Stradal TE, Wehland J, Rottner K (2005) N‐WASP deficiency impairs EGF internalization and actin assembly at clathrin‐coated pits. J Cell Sci 118: 3103–3115 · DOI
  7. Bohdanowicz M, Cosio G, Backer JM, Grinstein S (2010) Class I and class III phosphoinositide 3‐kinases are required for actin polymerization that propels phagosomes. J Cell Biol 191: 999–1012 · DOI
  8. Bu G, Geuze HJ, Strous GJ, Schwartz AL (1995) 39 kDa receptor‐associated protein is an ER resident protein and molecular chaperone for LDL receptor‐related protein. EMBO J 14: 2269–2280 · DOI · Paper page
  9. Choudhury R, Diao A, Zhang F, Eisenberg E, Saint‐Pol A, Williams C, Konstantakopoulos A, Lucocq J, Johannes L, Rabouille C, Greene LE, Lowe M (2005) Lowe syndrome protein OCRL1 interacts with clathrin and regulates protein trafficking between endosomes and the trans‐Golgi network. Mol Biol Cell 16: 3467–3479 · DOI
  10. Choudhury R, Noakes CJ, McKenzie E, Kox C, Lowe M (2009) Differential clathrin binding and subcellular localization of OCRL1 splice isoforms. J Biol Chem 284: 9965–9973 · DOI
  11. Christensen EI, Birn H (2002) Megalin and cubilin: multifunctional endocytic receptors. Nat Rev Mol Cell Biol 3: 256–266 · DOI
  12. Christensen EI, Devuyst O, Dom G, Nielsen R, Van der Smissen P, Verroust P, Leruth M, Guggino WB, Courtoy PJ (2003) Loss of chloride channel ClC‐5 impairs endocytosis by defective trafficking of megalin and cubilin in kidney proximal tubules. Proc Natl Acad Sci USA 100: 8472–8477 · DOI
  13. Christoforidis S, Miaczynska M, Ashman K, Wilm M, Zhao L, Yip SC, Waterfield MD, Backer JM, Zerial M (1999) Phosphatidylinositol‐3‐OH kinases are Rab5 effectors. Nat Cell Biol 1: 249–252 · DOI · Paper page
  14. Clague MJ, Urbe S, de Lartigue J (2009) Phosphoinositides and the endocytic pathway. Exp Cell Res 315: 1627–1631 · DOI
  15. Compagnon J, Gervais L, Roman MS, Chamot‐Boeuf S, Guichet A (2009) Interplay between Rab5 and PtdIns (4,5)P2 controls early endocytosis in the Drosophila germline. J Cell Sci 122: 25–35 · DOI
  16. Coon BG, Mukherjee D, Hanna CB, Riese II DJ, Lowe M, Aguilar RC (2009) Lowe syndrome patient fibroblasts display Ocrl1‐specific cell migration defects that cannot be rescued by the homologous Inpp5b phosphatase. Hum Mol Genet 18: 4478–4491 · DOI
  17. Cremona O, Di Paolo G, Wenk MR, Luthi A, Kim WT, Takei K, Daniell L, Nemoto Y, Shears SB, Flavell RA, McCormick DA, De Camilli P (1999) Essential role of phosphoinositide metabolism in synaptic vesicle recycling. Cell 99: 179–188 · DOI
  18. Cui S, Guerriero CJ, Szalinski CM, Kinlough CL, Hughey RP, Weisz OA (2010) OCRL1 function in renal epithelial membrane traffic. Am J Physiol Renal Physiol 298: F335–F345 · DOI
  19. Czekay RP, Orlando RA, Woodward L, Lundstrom M, Farquhar MG (1997) Endocytic trafficking of megalin/RAP complexes: dissociation of the complexes in late endosomes. Mol Biol Cell 8: 517–532 · DOI
  20. Dambournet D, Machicoane M, Chesneau L, Sachse M, Rocancourt M, El Marjou A, Formstecher E, Salomon R, Goud B, Echard A (2011) Rab35 GTPase and OCRL phosphatase remodel lipids and F‐actin for successful cytokinesis. Nat Cell Biol 13: 981–988 · DOI
  21. Daniele T, Di Tullio G, Santoro M, Turacchio G, De Matteis MA (2008) ARAP1 regulates EGF receptor trafficking and signalling. Traffic 9: 2221–2235 · DOI
  22. De Matteis MA, Godi A (2004) PI‐loting membrane traffic. Nat Cell Biol 6: 487–492 · DOI
  23. Derivery E, Sousa C, Gautier JJ, Lombard B, Loew D, Gautreau A (2009) The Arp2/3 activator WASH controls the fission of endosomes through a large multiprotein complex. Dev Cell 17: 712–723 · DOI · Paper page
  24. Duleh SN, Welch MD (2010) WASH and the Arp2/3 complex regulate endosome shape and trafficking. Cytoskeleton (Hoboken) 67: 193–206 · DOI · Paper page
  25. Erdmann KS, Mao Y, McCrea HJ, Zoncu R, Lee S, Paradise S, Modregger J, Biemesderfer D, Toomre D, De Camilli P (2007) A role of the Lowe syndrome protein OCRL in early steps of the endocytic pathway. Dev Cell 13: 377–390 · DOI
  26. Faucherre A, Desbois P, Nagano F, Satre V, Lunardi J, Gacon G, Dorseuil O (2005) Lowe syndrome protein Ocrl1 is translocated to membrane ruffles upon Rac GTPase activation: a new perspective on Lowe syndrome pathophysiology. Hum Mol Genet 14: 1441–1448 · DOI
  27. Faucherre A, Desbois P, Satre V, Lunardi J, Dorseuil O, Gacon G (2003) Lowe syndrome protein OCRL1 interacts with Rac GTPase in the trans‐Golgi network. Hum Mol Genet 12: 2449–2456 · DOI
  28. Fisher SE, van Bakel I, Lloyd SE, Pearce SH, Thakker RV, Craig IW (1995) Cloning and characterization of CLCN5, the human kidney chloride channel gene implicated in Dent disease (an X‐linked hereditary nephrolithiasis). Genomics 29: 598–606 · DOI
  29. Fukuda M, Kanno E, Ishibashi K, Itoh T (2008) Large scale screening for novel rab effectors reveals unexpected broad Rab binding specificity. Mol Cell Proteomics 7: 1031–1042 · DOI
  30. Ghosh P, Dahms NM, Kornfeld S (2003) Mannose 6‐phosphate receptors: new twists in the tale. Nat Rev Mol Cell Biol 4: 202–212 · DOI
  31. Gomez TS, Billadeau DD (2009) A FAM21‐containing WASH complex regulates retromer‐dependent sorting. Dev Cell 17: 699–711 · DOI · Paper page
  32. Gorbatyuk VY, Nosworthy NJ, Robson SA, Bains NP, Maciejewski MW, Dos Remedios CG, King GF (2006) Mapping the phosphoinositide‐binding site on chick cofilin explains how PIP2 regulates the cofilin‐actin interaction. Mol Cell 24: 511–522 · DOI
  33. Guerriero CJ, Weixel KM, Bruns JR, Weisz OA (2006) Phosphatidylinositol 5‐kinase stimulates apical biosynthetic delivery via an Arp2/3‐dependent mechanism. J Biol Chem 281: 15376–15384 · DOI
  34. Harrington AW, St Hillaire C, Zweifel LS, Glebova NO, Philippidou P, Halegoua S, Ginty DD (2011) Recruitment of actin modifiers to TrkA endosomes governs retrograde NGF signaling and survival. Cell 146: 421–434 · DOI
  35. Hayakawa A, Hayes SJ, Lawe DC, Sudharshan E, Tuft R, Fogarty K, Lambright D, Corvera S (2004) Structural basis for endosomal targeting by FYVE domains. J Biol Chem 279: 5958–5966 · DOI
  36. Hilpela P, Vartiainen MK, Lappalainen P (2004) Regulation of the actin cytoskeleton by PI (4,5) P2 and PI (3,4,5) P3. Curr Top Microbiol Immunol 282: 117–163
  37. Hryciw DH, Wang Y, Devuyst O, Pollock CA, Poronnik P, Guggino WB (2003) Cofilin interacts with ClC‐5 and regulates albumin uptake in proximal tubule cell lines. J Biol Chem 278: 40169–40176 · DOI
  38. Hyvola N, Diao A, McKenzie E, Skippen A, Cockcroft S, Lowe M (2006) Membrane targeting and activation of the Lowe syndrome protein OCRL1 by rab GTPases. EMBO J 25: 3750–3761 · DOI
  39. Kessels MM, Qualmann B (2002) Syndapins integrate N‐WASP in receptor‐mediated endocytosis. EMBO J 21: 6083–6094 · DOI
  40. Lasne D, Baujat G, Mirault T, Lunardi J, Grelac F, Egot M, Salomon R, Bachelot‐Loza C (2010) Bleeding disorders in Lowe syndrome patients: evidence for a link between OCRL mutations and primary haemostasis disorders. Br J Haematol 150: 685–688 · DOI
  41. Li Y, Lu W, Marzolo MP, Bu G (2001) Differential functions of members of the low density lipoprotein receptor family suggested by their distinct endocytosis rates. J Biol Chem 276: 18000–18006 · DOI · Paper page
  42. Lichter‐Konecki U, Farber LW, Cronin JS, Suchy SF, Nussbaum RL (2006) The effect of missense mutations in the RhoGAP‐homology domain on ocrl1 function. Mol Genet Metab 89: 121–128 · DOI
  43. Lowe CU, Terrey M, Mac LE (1952) Organic‐aciduria, decreased renal ammonia production, hydrophthalmos, and mental retardation; a clinical entity. AMA Am J Dis Child 83: 164–184
  44. Mao Y, Balkin DM, Zoncu R, Erdmann KS, Tomasini L, Hu F, Jin MM, Hodsdon ME, De Camilli P (2009) A PH domain within OCRL bridges clathrin‐mediated membrane trafficking to phosphoinositide metabolism. EMBO J 28: 1831–1842 · DOI
  45. Marzolo MP, Yuseff MI, Retamal C, Donoso M, Ezquer F, Farfan P, Li Y, Bu G (2003) Differential distribution of low‐density lipoprotein‐receptor‐related protein (LRP) and megalin in polarized epithelial cells is determined by their cytoplasmic domains. Traffic 4: 273–288 · DOI · Paper page
  46. Maxfield FR, McGraw TE (2004) Endocytic recycling. Nat Rev Mol Cell Biol 5: 121–132 · DOI · Paper page
  47. McCrea HJ, Paradise S, Tomasini L, Addis M, Melis MA, De Matteis MA, De Camilli P (2008) All known patient mutations in the ASH‐RhoGAP domains of OCRL affect targeting and APPL1 binding. Biochem Biophys Res Commun 369: 493–499 · DOI
  48. Merrifield CJ, Qualmann B, Kessels MM, Almers W (2004) Neural Wiskott Aldrich Syndrome Protein (N‐WASP) and the Arp2/3 complex are recruited to sites of clathrin‐mediated endocytosis in cultured fibroblasts. Eur J Cell Biol 83: 13–18 · DOI
  49. Miki H, Miura K, Takenawa T (1996) N‐WASP, a novel actin‐depolymerizing protein, regulates the cortical cytoskeletal rearrangement in a PIP2‐dependent manner downstream of tyrosine kinases. EMBO J 15: 5326–5335 · DOI
  50. Noakes CJ, Lee G, Lowe M (2011) The PH domain proteins IPIP27A and B link OCRL1 to receptor recycling in the endocytic pathway. Mol Biol Cell 22: 606–623 · DOI
  51. Padron D, Wang YJ, Yamamoto M, Yin H, Roth MG (2003) Phosphatidylinositol phosphate 5‐kinase Ibeta recruits AP‐2 to the plasma membrane and regulates rates of constitutive endocytosis. J Cell Biol 162: 693–701 · DOI
  52. Perera RM, Zoncu R, Lucast L, De Camilli P, Toomre D (2006) Two synaptojanin 1 isoforms are recruited to clathrin‐coated pits at different stages. Proc Natl Acad Sci USA 103: 19332–19337 · DOI
  53. Pfeffer SR (2009) Multiple routes of protein transport from endosomes to the trans Golgi network. FEBS Lett 583: 3811–3816 · DOI
  54. Pirruccello M, Swan LE, Folta‐Stogniew E, De Camilli P (2011) Recognition of the F&H motif by the Lowe syndrome protein OCRL. Nat Struct Mol Biol 18: 789–795 · DOI
  55. Ponting CP (2006) A novel domain suggests a ciliary function for ASPM, a brain size determining gene. Bioinformatics 22: 1031–1035 · DOI
  56. Puthenveedu MA, Lauffer B, Temkin P, Vistein R, Carlton P, Thorn K, Taunton J, Weiner OD, Parton RG, von Zastrow M (2010) Sequence‐dependent sorting of recycling proteins by actin‐stabilized endosomal microdomains. Cell 143: 761–773 · DOI · Paper page
  57. Riedl J, Crevenna AH, Kessenbrock K, Yu JH, Neukirchen D, Bista M, Bradke F, Jenne D, Holak TA, Werb Z, Sixt M, Wedlich‐Soldner R (2008) Lifeact: a versatile marker to visualize F‐actin. Nat Methods 5: 605–607 · DOI · Paper page
  58. Rottner K, Hanisch J, Campellone KG (2010) WASH, WHAMM and JMY: regulation of Arp2/3 complex and beyond. Trends Cell Biol 20: 650–661 · DOI
  59. Rusk N, Le PU, Mariggio S, Guay G, Lurisci C, Nabi IR, Corda D, Symons M (2003) Synaptojanin 2 functions at an early step of clathrin‐mediated endocytosis. Curr Biol 13: 659–663 · DOI
  60. Saito A, Sato H, Iino N, Takeda T (2010) Molecular mechanisms of receptor‐mediated endocytosis in the renal proximal tubular epithelium. J Biomed Biotechnol 2010: 403272 · DOI
  61. Schmid AC, Wise HM, Mitchell CA, Nussbaum R, Woscholski R (2004) Type II phosphoinositide 5‐phosphatases have unique sensitivities towards fatty acid composition and head group phosphorylation. FEBS Lett 576: 9–13 · DOI
  62. Scita G, Di Fiore PP (2010) The endocytic matrix. Nature 463: 464–473 · DOI
  63. Semerdjieva S, Shortt B, Maxwell E, Singh S, Fonarev P, Hansen J, Schiavo G, Grant BD, Smythe E (2008) Coordinated regulation of AP2 uncoating from clathrin‐coated vesicles by rab5 and hRME‐6. J Cell Biol 183: 499–511 · DOI
  64. Sonnichsen B, De Renzis S, Nielsen E, Rietdorf J, Zerial M (2000) Distinct membrane domains on endosomes in the recycling pathway visualized by multicolor imaging of Rab4, Rab5, and Rab11. J Cell Biol 149: 901–914 · DOI · Paper page
  65. Suchy SF, Nussbaum RL (2002) The deficiency of PIP2 5‐phosphatase in Lowe syndrome affects actin polymerization. Am J Hum Genet 71: 1420–1427 · DOI
  66. Swan LE, Tomasini L, Pirruccello M, Lunardi J, De Camilli P (2010) Two closely related endocytic proteins that share a common OCRL‐binding motif with APPL1. Proc Natl Acad Sci USA 107: 3511–3516 · DOI
  67. Takeda T, Yamazaki H, Farquhar MG (2003) Identification of an apical sorting determinant in the cytoplasmic tail of megalin. Am J Physiol Cell Physiol 284: C1105–C1113 · DOI
  68. Tsujishita Y, Guo S, Stolz LE, York JD, Hurley JH (2001) Specificity determinants in phosphoinositide dephosphorylation: crystal structure of an archetypal inositol polyphosphate 5‐phosphatase. Cell 105: 379–389 · DOI
  69. Ullrich O, Reinsch S, Urbe S, Zerial M, Parton RG (1996) Rab11 regulates recycling through the pericentriolar recycling endosome. J Cell Biol 135: 913–924 · DOI · Paper page
  70. Ungewickell A, Ward ME, Ungewickell E, Majerus PW (2004) The inositol polyphosphate 5‐phosphatase Ocrl associates with endosomes that are partially coated with clathrin. Proc Natl Acad Sci USA 101: 13501–13506 · DOI
  71. Ungewickell AJ, Majerus PW (1999) Increased levels of plasma lysosomal enzymes in patients with Lowe syndrome. Proc Natl Acad Sci USA 96: 13342–13344 · DOI
  72. van den Bout I, Divecha N (2009) PIP5K‐driven PtdIns (4,5) P2 synthesis: regulation and cellular functions. J Cell Sci 122: 3837–3850 · DOI
  73. von Blume J, Duran JM, Forlanelli E, Alleaume AM, Egorov M, Polishchuk R, Molina H, Malhotra V (2009) Actin remodeling by ADF/cofilin is required for cargo sorting at the trans‐Golgi network. J Cell Biol 187: 1055–1069 · DOI
  74. Watt SA, Kular G, Fleming IN, Downes CP, Lucocq JM (2002) Subcellular localization of phosphatidylinositol 4,5‐bisphosphate using the pleckstrin homology domain of phospholipase C delta1. Biochem J 363: 657–666 · DOI
  75. Yarar D, Waterman‐Storer CM, Schmid SL (2005) A dynamic actin cytoskeleton functions at multiple stages of clathrin‐mediated endocytosis. Mol Biol Cell 16: 964–975 · DOI · Paper page
  76. Yuseff MI, Farfan P, Bu G, Marzolo MP (2007) A cytoplasmic PPPSP motif determines megalin′s phosphorylation and regulates receptor′s recycling and surface expression. Traffic 8: 1215–1230 · DOI
  77. Zoncu R, Perera RM, Balkin DM, Pirruccello M, Toomre D, De Camilli P (2009) A phosphoinositide switch controls the maturation and signaling properties of APPL endosomes. Cell 136: 1110–1121 · DOI

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Metadata

Authors
Vicinanza, M., Di Campli, A., Polishchuk, E., Santoro, M., Di Tullio, G., Godi, A., Levtchenko, E., De Leo, M. G., Polishchuk, R., Sandoval, L., Marzolo, M., & De Matteis, M. A.
Venue
The EMBO Journal
Published
2011-10-04
Volume
30
Issue
24
Pages
4970-4985
ISSN
  • 0261-4189
  • 1460-2075
Cited by
196
References
3
Language
en

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