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Harnessing the clustered regularly interspaced short palindromic repeat (CRISPR)/CRISPR-associated Cas9 system to disrupt the hepatitis B virus
Abstract
The current therapies to treat hepatitis B virus (HBV) infection are limited. Recently, clustered regularly interspaced short palindromic repeat (CRISPR) systems, originally identified in bacteria and archaea, have been found to consist of an RNA-based adaptive immune system that degrades complimentary sequences of invading plasmids and viruses. Here, we studied the effects of the CRISPR/CRISPR-associated Cas9 system that was targeted to the surface antigen (HBsAg)-encoding region of HBV, both in a cell culture system and in vivo. The HBsAg levels in the media of the cells and in the sera of mice were analyzed by a quantitative enzyme-linked immunosorbent assay. The HBV DNA levels were assessed by quantitative PCR and HBsAg expression in mouse livers was assessed by an immunohistochemical assay. The amount of HBsAg secreted in the cell culture and mouse serum was reduced by CRISPR/Cas9 treatment. Immunohistochemistry analyses showed almost no HBsAg-positive cells in the liver tissue of CRISPR/Cas9-S1+X3-treated mice. The CRISPR/Cas9 system efficiently produced mutations in HBV DNA. Thus, CRISPR/Cas9 inhibits HBV replication and expression in vitro and in vivo and may constitute a new therapeutic strategy for HBV infection.
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PEI was used to deliver CRISPR plasmid DNA to inhibit HBV replication and gene expression in HBV-infected mice.
“PEI was also used to deliver CRISPR plasmid DNA to inhibit HBV replication and gene expression in HBV-infected mice (Zhen et al., 2015).”
From Delivering CRISPR: a review of the challenges and approaches (2018) · cites this paper as Zhen et al., 2015
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Cites
A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity
Jinek, M., Chylinski, K., Fonfara, I., Hauer, M., Doudna, J. A., & Charpentier, E. (2012) · Science · doi:10.1126/science.1225829 · Cited by 17,116
Multiplex Genome Engineering Using CRISPR/Cas Systems
Cong, L., Ran, F. A., Cox, D., Lin, S., Barretto, R., Habib, N., Hsu, P. D., Wu, X., Jiang, W., Marraffini, L. A., et al. (2013) · Science · doi:10.1126/science.1231143 · Cited by 15,339
RNA-Guided Human Genome Engineering via Cas9
Mali, P., Yang, L., Esvelt, K. M., Aach, J., Guell, M., DiCarlo, J. E., Norville, J. E., & Church, G. M. (2013) · Science · doi:10.1126/science.1232033 · Cited by 9,210
Wang, H., Yang, H., Shivalila, C. S., Dawlaty, M. M., Cheng, A. W., Zhang, F., & Jaenisch, R. (2013) · Cell · doi:10.1016/j.cell.2013.04.025 · Cited by 3,495
Efficient genome editing in zebrafish using a CRISPR-Cas system
Hwang, W. Y., Fu, Y., Reyon, D., Maeder, M. L., Tsai, S. Q., Sander, J. D., Peterson, R. T., Yeh, J.-R. J., & Joung, J. K. (2013) · Nature Biotechnology · doi:10.1038/nbt.2501 · Cited by 2,937
Crystal structure of Cas9 in complex with guide RNA and target DNA
Nishimasu, H., Ran, F. A., Hsu, P. D., Konermann, S., Shehata, S. I., Dohmae, N., Ishitani, R., Zhang, F., & Nureki, O. (2014) · Cell · doi:10.1016/j.cell.2014.02.001 · Cited by 2,306
Improving CRISPR-Cas nuclease specificity using truncated guide RNAs
Fu, Y., Sander, J. D., Reyon, D., Cascio, V. M., & Joung, J. K. (2014) · Nature Biotechnology · doi:10.1038/nbt.2808 · Cited by 1,993
TALENs: A widely applicable technology for targeted genome editing
Joung, J. K., & Sander, J. D. (2013) · Nature Reviews Molecular Cell Biology · doi:10.1038/nrm3486 · Cited by 1,650
Harnessing the CRISPR/Cas9 system to disrupt latent HIV-1 provirus
Ebina, H., Misawa, N., Kanemura, Y., & Koyanagi, Y. (2013) · Scientific Reports · doi:10.1038/srep02510 · Cited by 565
Control of cccDNA function in hepatitis B virus infection
Levrero, M., Pollicino, T., Petersen, J., Belloni, L., Raimondo, G., & Dandri, M. (2009) · Journal of Hepatology · doi:10.1016/j.jhep.2009.05.022 · Cited by 552
Schiffer, J. T., Swan, D. A., Stone, D., & Jerome, K. R. (2013) · PLoS Computational Biology · doi:10.1371/journal.pcbi.1003131 · Cited by 44
Flagged first, then by citations
Research works printed but not linked: 56
- Nguyen DH, Ludgate L, Hu J . Hepatitis B virus-cell interactions and pathogenesis. J Cell Physiol 2008; 216: 289–294. · DOI
- Lee WM . Hepatitis B virus infection. N Engl J Med 1997; 337: 1733–1745. · DOI
- Lau JY, Wright TL . Molecular virology and hathogenesis of hepatitis B. Lancet 1993; 342: 1335–1340.
- Wands JR, Blum HE . Primary hepatocellular carcinoma. N Engl J Med 1991; 325: 729–731. · DOI
- Brechot C, Pourcel C, Louise A, Rain B, Tiollais P . Presence of integrated hepatitis B virus DNA sequences in cellular DNA of human hepatocellular carcinoma. Nature 1980; 86: 533–535. · DOI
- Bréchot C, Nalpas B, Couroucé AM, Duhamel G, Callard P, Carnot F et al. Evidence that hepatitis B virus has a role in liver-cell carcinoma in alcoholic liver disease. N Engl J Med 1982; 306: 1384–1387. · DOI
- Dienstag JL, Cianciara J, Karayalcin S, Kowdley KV, Willems B, Plisek B et al. Durability of serologic response after lamivudine treatment of chronic hepatitis B. Hepatology 2003; 37: 748–755. · DOI
- Lai CL, Rosmawati M, Lao J, Van Vlierberghe H, Anderson FH, Thomas N et al. Entecavir is superior to lamivudine in reducing hepatitis B virus DNA in patients with chronic hepatitis B infection. Gastroenterology 2002; 123: 1831–1838. · DOI
- Lin OS, Keeffe EB . Current treatment strategies for chronic hepatitis B and C. Annu Rev Med 2001; 52: 29–49. · DOI
- Marcellin P, Chang TT, Lim SG, Tong MJ, Sievert W, Shiffman ML et al. Adefovir dipivoxil for the treatment of hepatitis B e antigen positive chronic hepatitis B. N Engl J Med 2003; 348: 808–816. · DOI
- Buti M, Rodriguez-Frias F, Jardi R, Esteban R . Hepatitis B virus genome variability and disease progression: the impact of pre-core mutants and HBV genotypes. J Clin Virol 2005; 34: S79–S82. · DOI
- Tillmann HL . Antiviral therapy and resistance with hepatitis B virus infection. World J Gastroenterol 2007; 13: 125–140. · DOI
- Raimondo G, Caccamo G, Filomia R, Pollicino T . Occult HBV infection. Semin Immunopathol 2013; 35: 39–52. · DOI
- Xie H-Y, Cheng J, Xing C-Y, Wang J-J, Su R, Wei X-Y et al. Evaluation of hepatitis B viral replication and proteomic analysis of HepG2.2.15 cell line after knockdown of HBx. Hepatobility Pancreat Dis Int 2011; 10: 295–301. · DOI
- Delius H, Gough NM, Cameron CH, Murray K . Structure of the Hepatitis B Virus Genome. J Virol 1983; 47: 337–343. · DOI
- Wain-Hobson S, Pourcel C, Brechot C, Charnay P, Dubois MF, Fritsch A et al. Structure and expression of the hepatitis B virus genome. Dev Biol Stand 1981; 50: 293–300.
- Bloom K, Ely A, Mussolino C, Cathomen T, Arbuthnot P . Inactivation of Hepatitis B virus replication in cultured cells and in vivo with engineered transcripation activator-like effector nucleases. Am Soc Gene Cell Ther 2013; 10: 1038.
- Zoulim F, Saoutellia A, Seeger C . Woodchuck hepatitis virus X protein is required for viral infection in vivo. J Virol 1994; 68: 2026–2030. · DOI
- Arbuthnot P, Capovilla A, Kew M . Putative role of hepatitis B virus X protein in hepatocarcinogenesis: effects on apoptosis, DNA require, mitogen-activated protein kinase and JAK/STAT pathways. J Gastroenterol Hepatol 2000; 15: 357–368. · DOI
- Tuttleman JS, Pourcel C, Summers J . Formation of the pool of covalently closed circular viral DNA in hepadnavirus-infected cells. Cell 1986; 47: 451–460. · DOI
- Wu TT, Coates L, Aldrich CE, Summers J, Mason WS . In hepatocytes infected with duck hepatitis B virus, the template for viral RNA synthesis is amplified by an intracellular pathway. Virology 1990; 175: 255–261. · DOI
- Levrero M, Pollicino T, Petersen J, Belloni L, Raimondo G, Dandri M . Control of cccDNA function in hepatitis B virus infection. J Hepatol 2009; 51: 581–592. · DOI · Paper page
- Urnov FD, Miller JC, Lee YL, Beausejour CM, Augustus S, Jamieson AC et al. Highly efficient endogenous human gene correcting using designed zinc-finger nucleases. Nature 2005; 435: 646–651. · DOI
- Mahfouz MM, Li L, Shamimuzzaman M, Wibowo A, Fang X, Zhu JK . De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double strand breaks. Proc Natl Acad Sci USA 2011; 108: 2623–2628. · DOI
- Liu J, Li C, Yu Z, Huang P, Wu H, Wei C et al. Efficient and specific modifications of the Drosophila genome by means of an easy TALEN strategy. J Genet Genomics 2012; 39: 209–215. · DOI
- Huang P, Xiao A, Zhou M, Zhu Z, Lin S, Zhang B . Heritable gene targeting in zebrafish using customized TALENs. Nat Biotechnol 2011; 29: 699–700. · DOI
- Dolgin E . The knockout rat pack. Nat Med 2010; 16: 254–257. · DOI
- Klug A . The discovery of zinc fingers and their applications in gene regulation and genome manipulation. Annu Rev Biochem 2010; 79: 213–231. · DOI · Paper page
- Gasiunas G, Barrangou R, Horvath P, Siksnys V . Cas9-crRNA ribonucleoprotein complex mediates specific DNA cleavage for adaptive immunity in bacteria. Proc Natl Acad Sci USA 2012; 109: E2579–E2586. · DOI · Paper page
- Garneau JE, Dupuis ME, Villion M, Romero DA, Barrangou R, Boyaval P et al. The CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA. Nature 2010; 468: 67–71. · DOI
- Ebina H, Misawa N, Kanemura Y, Koyanagi Y . Harnessing the CRISPR/Cas9 system to disrupt latent HIV-1 provirus. Sci Rep 2013; 10: 1038.
- Cho SW, Kim S, Kim JM, Kim JS . Targeted genome engineering in human cells with the Cas9 RNA-guided endonuclease. Nat Biotechnol 2013; 31: 230–232. · DOI · Paper page
- Yang PL, Althage A, Chung J, Chisari FV . Hydrodynamic injection of viral DNA: a mouse model of acute hepatitis B virus infection. Proc Natl Acad Sci USA 2012; 99: 13825–13830. · DOI
- Esvelt KM, Wang HH . Genome-scale engineering for systems and synthetic biology. Mol Syst Biol 2013; 9: 641. · DOI
- Schiffer JT, Aubert M, Weber ND, Mintzer E, Stone D, Jerome KR . Targeted DNA mutagenesis for the cure of chronic viral infections. J Virol 2012; 86: 8920–8936. · DOI
- Jurica MS, Stoddard BL . Homing endonucleases: structure, function and evalution. Cell Mol Life Sci 1999; 55: 1304–1326. · DOI
- Aiba Y, Sumaoka J, Komiyama M . Artificial DNA cutters for DNA manipulation and genome engineering. Chem Soc Rev 2011; 40: 5657–5668. · DOI
- Kim YG, Cha J, Chandrasegaran S . Hybrid restriction enzymes: zinc finger fusions to Fok I cleavage domain. Proc Nati Acod Sci USA 1996; 93: 1156–1160. · DOI · Paper page
- Hu W, Kaminski R, Yang F, Zhang Y, Cosentino L, Li F et al. RNA-directed gene editing specifically eradicates latent and prevents new HIV-1 infection. Proc Natl Acad Sci USA 2014; 21: pii201405186.
- Mashiko D, Fujihara Y, Satouh Y, Miyata H, Isotani A, Ikawa M . Generation of mutant mice by pronuclear injection of circular plasmid expressing Cas9 and single guided RNA. Sci Rep 2013; 10: 3355. · DOI
- Fujji W, Kano K, Sugiura K, Naito K . Repeatable construction method for engineered zinc nuclease based on overlap extension PCR and TA-cloning. PLoS One 2013; 8: e59801. · DOI
- Sung YH, Baek IJ, Kim DH, Jeon J, Lee J, Lee K et al. Knockout mice created by TALEN-mediated gene targeting. Nat Biotechnol 2013; 31: 23–24. · DOI
- Fujii W, Kawasaki K, Sugiura K, Naito K . Efficient generation of large-scale genome-modified mice using gRNA and CAS9 endonuclease. Nucleic Acids Res 2013; 41: e187. · DOI
- Yin H, Xue W, Chen S, Bogorad RL, Benedetti E, Grompe M et al. Genome editing with Cas9 in adult mice corrects a disease mutation and phenotype. Nat Biotechnol 2014; 32: 551–553. · DOI · Paper page
- Ying R-S, Zhu C, Fan X-G, Li N, Tian X-F, Liu H-B et al. 2007. Hepatitis B virus is inhibited by RNA interference in cell culture and in mice. Antiviral Res 2007; 73: 24–30. · DOI
- Yang W, Mason WS, Summers J . Covalently dosed circular viral DNA formed from two types of linear DNA in woodchuck hepatitis virus-infected liver. J Virol 1996; 70: 4567–4575. · DOI
- Dejean A, Vitvitski L, Brechot C, Trepo C, Tiollais P, Charnay P . Presence and state of woodchuck hepatitis virus DNA in liver and serum of woodchucks: further analogies with human hepatitis B virus. Virology 1982; 121: 195–199. · DOI
- Mali P, Yang L, Esvelt KM, Aach J, Guell M, DiCarlo JE et al. RNA-guided human genome engineering via Cas9. Science 2013; 339: 823–826. · DOI · Paper page
- Ran FA, Hsu PD, Lin CY, Gootenberg JS, Konermann S, Trevino AE et al. Double nicking by RNA-guided CRISPR Cas9 for enhanced genome editing specificity. Cell 2013; 154: 1380–1389. · DOI · Paper page
- Wong DK, Yuen MF, Yuan H, Sum SS, Hui CK, Hall J . Quantitation of covalently closed circular hepatitis B virus DNA in chronic hepatitis B patients. Hepatology 2004; 40: 727–737. · DOI
- Tremblay JP, Xiao X, Aartsma-Rus A, Barbas C, Blau HM, Bogdanove AJ et al. Translating the genomics revolution: the need for an international gene therapy consortium for monogenic diseases. Mol Ther 2013; 21: 266–268. · DOI
- Guschin DY, Waite AJ, Katibah GE, Miller JC, Holmes MC, Rebar EJ . A rapid and general assay for monitoring endogenous gene modification. Methods Mol Biol 2010; 649: 247–256. · DOI
- Li D, Xu DZ, Choi BC, Men K, Zhang JX, Lei XY . Preliminary study on the efficacy and safety of lamivudine and interferon alpha therapy in decreasing serum HBV DNA level in HBV positive transgenic mice during pregnancy. J Med Virol 2005; 76: 2003–2007. · DOI
- Chen X, Li M, Le X, Ma W, Zhou B . Recombinant hepatitis B core antigen carrying preS1 epitopes induce immune response against chronic HBV infection. Vaccine 2004; 22: 439–446. · DOI
- Gao LF, Sun WS, Ma CH, Liu SX, Wang XY, Zhang LN . Establishment of mice model with human viral hepatitis B. World J Gastroenterol 2004; 10: 841–846. · DOI
- Zhang G, Budker V, Wolff A . High levels of foreign gene expression in hepatocytes after tail vein injections of naked plasmid DNA.Hum. Gene Ther 1999; 10: 1735–1737. · DOI
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Self-citation
Metadata
- Authors
- Zhen, S., Hua, L., Liu, Y.-H., Gao, L.-C., Fu, J., Wan, D.-Y., Dong, L.-H., Song, H.-F., & Gao, X.
- Venue
- Gene Therapy
- Published
- 2015-02-05
- Volume
- 22
- Issue
- 5
- Pages
- 404-412
- ISSN
- 0969-7128
- 1476-5462
- Cited by
- 215
- References
- 11
- Language
- en
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