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The respiratory tract microbiome and lung inflammation: a two-way street.
Open accessAbstract
The lungs are not sterile or free from bacteria; rather, they harbor a distinct microbiome whose composition is driven by different ecological rules than for the gastrointestinal tract. During disease, there is often a shift in community composition towards Gammaproteobacteria, the bacterial class that contains many common lung-associated gram-negative "pathogens." Numerous byproducts of host inflammation are growth factors for these bacteria. The extracellular nutrient supply for bacteria in the lungs, which is severely limited during health, markedly increases due to the presence of mucus and vascular permeability. While Gammaproteobacteria benefit from airway inflammation, they also encode molecular components that promote inflammation, potentially creating a cyclical inflammatory mechanism. In contrast, Prevotella species that are routinely acquired via microaspiration from the oral cavity may participate in immunologic homeostasis of the airways.vAreas of future research include determining for specific lung diseases (1) whether an altered lung microbiome initiates disease pathogenesis, promotes chronic inflammation, or is merely a marker of injury and inflammation, (2) whether the lung microbiome can be manipulated therapeutically to change disease progression, (3) what molecules (metabolites) generated during an inflammatory response promote cross-kingdom signaling, and (4) how the lung "ecosystem" collapses during pneumonia, to be dominated by a single pathogen.
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“Prevotella from microaspiration, can also participate in the immune homeostasis of the respiratory tract (Huffnagle et al., 2017).”
From Oral Microbiome and SARS-CoV-2: Beware of Lung Co-infection (2020) · cites this paper as Huffnagle et al., 2017
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Cites
Structure, function and diversity of the healthy human microbiome
The Human Microbiome Project Consortium (2012) · Nature · doi:10.1038/nature11234 · Cited by 11,726
A Toll-like receptor recognizes bacterial DNA
Hemmi, H., Takeuchi, O., Kawai, T., Kaisho, T., Sato, S., Sanjo, H., Matsumoto, M., Hoshino, K., Wagner, H., Takeda, K., et al. (2000) · Nature · doi:10.1038/35047123 · Cited by 6,491 · cited 1×
“Many Gammaproteobacteria also encode TLR5-binding flagellins, as well as TLR9-binding unmethylated CpG motifs.(50,51) Thus, a feedback loop can develop where bacteria that contain the most immunostimulatory microbe-associated molecular patterns are also the ones that benefit most metabolically from an inflammatory env…”
BackgroundMetabolites produced by commensal bacteria promote peripheral regulatory T-cell generation
Arpaia, N., Campbell, C., Fan, X., Dikiy, S., van der Veeken, J., deRoos, P., Liu, H., Cross, J. R., Pfeffer, K., Coffer, P. J., et al. (2013) · Nature · doi:10.1038/nature12726 · Cited by 4,838
Induction of Colonic Regulatory T Cells by Indigenous Clostridium Species
Atarashi, K., Tanoue, T., Shima, T., Imaoka, A., Kuwahara, T., Momose, Y., Cheng, G., Yamasaki, S., Saito, T., Ohba, Y., et al. (2011) · Science · doi:10.1126/science.1198469 · Cited by 3,752
Dewhirst, F. E., Chen, T., Izard, J., Paster, B. J., Tanner, A. C. R., Yu, W.-H., Lakshmanan, A., & Wade, W. G. (2010) · Journal of Bacteriology · doi:10.1128/jb.00542-10 · Cited by 3,352
Topographical and Temporal Diversity of the Human Skin Microbiome
Grice, E. A., Kong, H. H., Conlan, S., Deming, C. B., Davis, J., Young, A. C., Program, N. C. S., Bouffard, G. G., Blakesley, R. W., Murray, P. R., et al. (2009) · Science · doi:10.1126/science.1171700 · Cited by 2,953
Gut Microbiota Metabolism of Dietary Fiber Influences Allergic Airway Disease and Hematopoiesis
Trompette, A., Gollwitzer, E. S., Yadava, K., Sichelstiel, A. K., Sprenger, N., Ngom-Bru, C., Blanchard, C., Junt, T., Nicod, L. P., Harris, N. L., et al. (2014) · Nature Medicine · doi:10.1038/nm.3444 · Cited by 2,862
Zelante, T., Iannitti, R. G., Cunha, C., De Luca, A., Giovannini, G., Pieraccini, G., Zecchi, R., D’Angelo, C., Massi-Benedetti, C., Fallarino, F., et al. (2013) · Immunity · doi:10.1016/j.immuni.2013.08.003 · Cited by 2,614
Disordered Microbial Communities in Asthmatic Airways
Hilty, M., Burke, C. M., Pedro, H., Cárdenas, P., Bush, A., Bossley, C. J., Davies, J. C., Ervine, A., Poulter, L. W., Pachter, L. S., et al. (2010) · PLoS ONE · doi:10.1371/journal.pone.0008578 · Cited by 1,874
Inflammation and wound healing: the role of the macrophage
Koh, T. J., & DiPietro, L. A. (2011) · Expert Reviews in Molecular Medicine · doi:10.1017/s1462399411001943 · Cited by 1,667
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Koo, W. L. Y., Thng, K. X., Tiew, P. Y., & Chotirmall, S. H. (2026) · British Journal of Hospital Medicine · doi:10.31083/bjhm50163 · Cited by 1
Jin, J., Wen, C., Li, J., Mai, C., Yuan, J., Wang, P., Peng, D., Zhao, Y., Sun, C., Ma, X., et al. (2026) · Science China Life Sciences · doi:10.1007/s11427-024-3076-6 · Cited by 1
Minty, M., Lê, S., Addi, M., Canceill, T., Thomas, C., Loubières, P., Burcelin, R., & Blasco‐Baqué, V. (2026) · Reviews in Endocrine and Metabolic Disorders · doi:10.1007/s11154-026-10017-w · Cited by 1
Kubba, R., Kejriwal, S., Razzouk, J. A., & Evans, J. R. (2026) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2026.1766220 · Cited by 1
Gschwendtner, S., Kovacevic, D., Gaede, K. I., Herzmann, C., Overmann, J., Schloter, M., & Krauss‐Etschmann, S. (2026) · Respiratory Research · doi:10.1186/s12931-026-03644-z · Cited by 2
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Yu, Z., Song, Z., Hong, W., He, X., & Wei, X. (2026) · Genes & Diseases · doi:10.1016/j.gendis.2026.102200 · Cited by 1
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Arooj, S., Zubair, A., Batool, S. Z., Niaz, G., Ali, M., Waheed, Y., Elsharkawy, E. R., & Afghan, N. (2026) · MicrobiologyOpen · doi:10.1002/mbo3.70349 · Cited by 1
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Vacaru, R.-P., Didilescu, A. C., & Scannapieco, F. A. (2026) · Journal of Periodontal Research · doi:10.1111/jre.70126 · Cited by 1
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Liu, A., Ran, D., Shen, Z., Rojba, M., & Zhang, J. (2026) · Microorganisms · doi:10.3390/microorganisms14071572 · Cited by 1
Temneanu, O. R., Mihai, A., Olariu, R., Oroș, M., Ioniuc, I. K., Lupu, V. V., Ignat, A., Grudnicki, A., Roșu, M. F., Șerban, R., et al. (2026) · Nutrients · doi:10.3390/nu18152496 · Cited by 1
Bani-Amer, M., Hundam, S., Ababneh, M. M. K., Al‐Zghoul, M. B., Alghizzawi, D., Abualghusein, I. H. M., & Al-Ghawanmeh, A. (2026) · VirusDisease · doi:10.1007/s13337-026-00980-y · Cited by 1
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Ruf, F., Schmidt, K. M., Pross, A., Zeman, F., Hackl, C., Schlitt, H. J., & Göcze, I. (2022) · Transplantation Proceedings · doi:10.1016/j.transproceed.2021.11.032 · Cited by 2
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Park, J., Lemons, A. R., Croston, T. L., Roseman, J., Green, B. J., & Cox‐Ganser, J. M. (2025) · Building and Environment · doi:10.1016/j.buildenv.2025.112657 · Cited by 1
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Goldspiel, B. P., Haggadone, M. D., Shin, S., & Bailis, W. (2025) · Elsevier eBooks · doi:10.1016/b978-0-443-15447-8.00003-9 · Cited by 1
Foesel, B. U., Pfeiffer, S., Raj, A. C. D., Krauss‐Etschmann, S., & Schloter, M. (2019) · European Respiratory Society eBooks · doi:10.1183/2312508x.10015718 · Cited by 1
Current and Future Diagnostic Tests for COVID-19 - Challenges and Recommendations
Kaushal, A. (2020) · ACTA SCIENTIFIC MICROBIOLOGY · doi:10.31080/asmi.2020.03.0683 · Cited by 1
Cruz, J. R. (2020) · Ciencia Tecnología y Salud · doi:10.36829/63cts.v7i3.974 · Cited by 1
Lung neutrophils on a paleo diet: lean, mean inflammatory machines
Cartwright, I. M., & Colgan, S. P. (2021) · Journal of Clinical Investigation · doi:10.1172/jci149495 · Cited by 1
Schmid‐Hempel, P. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198832140.003.0007 · Cited by 1
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Bothamley, G. H. (2018) · European Respiratory Society eBooks · doi:10.1183/2312508x.10026118 · Cited by 1
Russo, E., Curini, L., Fabbrizzi, A., & Amedei, A. (2022) · Springer eBooks · doi:10.1007/978-981-16-8957-4_14 · Cited by 1
Pérez‐Cobas, A. E., Ginévra, C., Rusniok, C., Jarraud, S., & Buchrieser, C. (2019) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/808238 · Cited by 1
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Cho, Y.-J. (2020) · Allergy Asthma and Immunology Research · doi:10.4168/aair.2020.12.3.375 · Cited by 1
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Cadena, A. M. (2017) · D-Scholarship@Pitt (University of Pittsburgh)
Bryant, M. (2017) · D-Scholarship@Pitt (University of Pittsburgh)
Albornoz, S. P. P. (2018) · Digital Library of Theses and Dissertations (Universidade de São Paulo) · doi:10.11606/t.17.2018.tde-13092018-111209
Küçük, M. P., & Ülger, F. (2019) · Türk yoğun bakım derneği dergisi/Türk yoğun bakım dergisi · doi:10.4274/tybd.galenos.2019.70883
Nishizawa, T. (2020) · Respiratory disease series · doi:10.1007/978-981-15-4506-1_9
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Toni, T., & Alverdy, J. C. (2021) · Annals of Surgery Open · doi:10.1097/as9.0000000000000056
Zhou, Y., Lu, S., Li, M., Wang, M., Ma, J., Mao, Y., Zhu, Z., Min, J., Xiao, J., Qiu, R., et al. (2021) · Research Square · doi:10.21203/rs.3.rs-490714/v1
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Kolla, H. B., Reddy, P. N., & Bramhachari, P. V. (2021) · Springer eBooks · doi:10.1007/978-981-16-3156-6_7
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Schmid‐Hempel, P. (2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198832140.003.0015
Sulaiman, I., Tsay, J.-C. J., & Segal, L. N. (2022) · Respiratory medicine · doi:10.1007/978-3-030-87104-8_8
Chronic lung sepsis in a sample of Egyptian patients with type II diabetes mellitus
Elhussini, M. S., Hussieny, M. S. E., & Bilal, D. (2021) · Journal of The Arab Society for Medical Research · doi:10.4103/jasmr.jasmr_25_21
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Finotto, S., Haag, P., Andreev, D., Li, N., Kiefer, A., Rauh, M., Gleich, L., Wirtz, S. J., & Papadopoulos, N. G. (2021) · Research Square · doi:10.21203/rs.3.rs-289750/v1
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Faculty Opinions recommendation of Caspase-11 promotes allergic airway inflammation.
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Megremis, S., Yap, C. F., Tapinos, A., Kritikou, M., Wardzyńska, A., Busby, J., Rovina, N., Chałubiński, M., Xepapadaki, P. V., Muldoon, M. R., et al. (2022) · Research Square · doi:10.21203/rs.3.rs-1580980/v1
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Zhang, L., Rahman, J. A., Lashua, L. P., Gordon, A. L., Balmaseda, Á., Kuan, G. M., Bonneau, R., & Ghedin, E. (2022) · medRxiv · doi:10.1101/2022.08.11.22278625
Vientós‐Plotts, A. I. (2022) · MOspace Institutional Repository (University of Missouri) · doi:10.32469/10355/91692
Belyaev, V. S., Червинец, В. М., & Chervinets, Y. V. (2022) · PULMONOLOGIYA · doi:10.18093/0869-0189-2022-3053
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Iancu, M. A., Chirila, S. I., & Busneag, I.-C. (2022) · Medic ro · doi:10.26416/med.150.6.2022.7360
(2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198832140.002.0006
(2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198832140.002.0007
(2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198832140.002.0004
(2021) · Oxford University Press eBooks · doi:10.1093/oso/9780198832140.002.0003
Nicola, T., Wenger, N. M., Xu, X., Evans, M. T., Rezonzew, G., Qiao, L., Yang, Y., Ambalavanan, N., Blalock, J. E., Gaggar, A., et al. (2023) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2023.03.02.529882
Pulvirenti, F., Giuffrè, M., Pentimalli, T. M., Camilli, R., Milito, C., Villa, A., Cerquetti, M., Pantosti, A., & Quinti, I. (2023) · Research Square · doi:10.21203/rs.3.rs-2700729/v1
Paradnikova, S. A., Druzhinin, V. G., Baranova, E. D., Сергеевич, Д. П., & Викторович, Л. А. (2023) · Molecular Genetics Microbiology and Virology (Russian) · doi:10.17116/molgen20234102113
Hosmani, J., Alqarni, A., Yavagal, C. M., Abullais, S. S., Khalid, I., Basheer, S. A., Ibrahim, M., Alshahrani, M. Y., & Alshahrani, A. Y. (2023) · Science of Advanced Materials · doi:10.1166/sam.2023.4493
Paradnikova, S. A., Druzhinin, V. G., Baranova, E. D., Сергеевич, Д. П., & Викторович, Л. А. (2023) · Molecular Genetics Microbiology and Virology · doi:10.3103/s0891416823020076
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Haag, P., Андреев, Д. А., Li, N., Kiefer, A., Rauh, M., Gleich, L., Wirtz, S. J., Papadopoulos, N. G., & Finotto, S. (2024) · doi:10.22541/au.170664743.36198990/v1
Lacroix, M., Moreau, J., Zampaloni, C., Bissantz, C., Shirvani, H., Marchand, S., Couet, W. R., & Chauzy, A. (2024) · International Journal of Antimicrobial Agents · doi:10.1016/j.ijantimicag.2024.107189
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Daniel, S., & Lund, A. K. (2024) · Elsevier eBooks · doi:10.1016/b978-0-323-95488-4.00117-0
Udayan, S., & Naik, A. S. (2024) · Elsevier eBooks · doi:10.1016/b978-0-323-90144-4.00004-5
Anwar, H., Mukhtar, I., Muzaffar, H., Irfan, S., Saleem, S., & Ijaz, F. (2024) · Springer eBooks · doi:10.1007/978-981-97-3790-1_2
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Yang, X., Jiao, W., Zeng, X., Yu, J., Xiao, J., Jiang, T., Tang, H., Bi, J., Chen, Y., Li, X., et al. (2024) · Pediatric Pulmonology · doi:10.1002/ppul.27253
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Liu, F., Luo, J., Feng, L., Chen, X., Xu, Y., Xia, Y., & Liu, Y. (2025) · Research Square · doi:10.21203/rs.3.rs-6051340/v1
Respiratory microbiome and respiratory infections
Zou, X., Mu, Y., Ni, Y., & Cao, B. (2025) · Chinese Science Bulletin (Chinese Version) · doi:10.1360/tb-2024-0689
Role of the gut lung axis and microbiota based approaches in the treatment of tuberculosis
Nayak, A. K., Pratap, R., Rai, V. K., Kar, B., Ghosh, G., & Rath, G. (2025) · Elsevier eBooks · doi:10.1016/b978-0-443-24035-5.00007-4
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Hernandez, C. J. R., Terekhova, M., Chen, P., Perpich, J. D., Potempa, B. A., Carey, K., Peeples, M. E., Grayson, M. H., Potempa, J., Artyomov, M. N., et al. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.05.03.652018
Pérez‐Losada, M. (2025) · Allergies · doi:10.3390/allergies5020014
Brintha, V. P., Kumar, S. A., Shanmugam, S., & Narayanan, M. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.07.08.661948
Zhang, T., Zhang, L., He, Y., Hou, J., & Tao, H. (2025) · Journal of Thoracic Disease · doi:10.21037/jtd-2025-278
Pesthy, S., Gschwendtner, S., Schloter, M., Liebchen, N., Kauke, T., Kovács, J., & Liebchen, U. (2025) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2025.10.08.680399 · Cited by 1
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Tarquinio, K. M., Farrell, J. M., Varga, J. J., Zhao, C., Mehlferber, E. C., & Brown, S. P. (2025) · Microbiology Spectrum · doi:10.1128/spectrum.00448-25
Drost, M., & Fuhrmann, G. (2025) · ACS Infectious Diseases · doi:10.1021/acsinfecdis.5c00759
Yi, X.-Z., Yang, J.-H., Huang, Y., Han, X.-R., Li, H.-M., Cen, L.-J., Lin, Z.-H., Pan, C.-X., Wang, Z., & Guan, W.-J. (2024) · Figshare · doi:10.6084/m9.figshare.26634996
Yi, X.-Z., Yang, J.-H., Huang, Y., Han, X.-R., Li, H.-M., Cen, L.-J., Lin, Z.-H., Pan, C.-X., Wang, Z., & Guan, W.-J. (2024) · Figshare · doi:10.6084/m9.figshare.26635026
Melo-Dias, S., Cabral, M., Furtado, A., Souto‐Miranda, S., Mendes, M. A., Cravo, J., Almeida, C. R., Marques, A., & Sousa, A. (2024) · Figshare · doi:10.6084/m9.figshare.26564073
Daniel, S., Phillippi, D., Schneider, L. J., Nguyen, K. N., Mirpuri, J., & Lund, A. K. (2021) · Figshare · doi:10.6084/m9.figshare.13549788
Yi, X.-Z., Yang, J.-H., Huang, Y., Han, X.-R., Li, H.-M., Cen, L.-J., Lin, Z.-H., Pan, C.-X., Wang, Z., & Guan, W.-J. (2024) · Figshare · doi:10.6084/m9.figshare.26635005
Goolam Mahomed, T., Peters, R., Pretorius, G., Goolam Mahomed, A., Ueckermann, V., Kock, M., & Ehlers, M. (2021) · Figshare · doi:10.6084/m9.figshare.15253893
Yi, X.-Z., Yang, J.-H., Huang, Y., Han, X.-R., Li, H.-M., Cen, L.-J., Lin, Z.-H., Pan, C.-X., Wang, Z., & Guan, W.-J. (2024) · Figshare · doi:10.6084/m9.figshare.26635032
Additional file 1 of Saliva as a non-invasive specimen for COPD assessment
Melo-Dias, S., Valente, C., Andrade, L., Marques, A. S. P. D. D., & Sousa, A. (2022) · Figshare · doi:10.6084/m9.figshare.19092499
Jeon, Y. J., Gil, C. H., Won, J., Jo, A., & Kim, H. J. (2020) · Figshare · doi:10.6084/m9.figshare.13065401
Yi, X.-Z., Yang, J.-H., Huang, Y., Han, X.-R., Li, H.-M., Cen, L.-J., Lin, Z.-H., Pan, C.-X., Wang, Z., & Guan, W.-J. (2024) · Figshare · doi:10.6084/m9.figshare.26635017
Melo-Dias, S., Cabral, M., Furtado, A., Souto‐Miranda, S., Mendes, M. A., Cravo, J., Almeida, C. R., Marques, A., & Sousa, A. (2024) · Figshare · doi:10.6084/m9.figshare.26564076
Fenn, D. W., Abdel‐Aziz, M. I., van Oort, P. M. P., Brinkman, P., Ahmed, W., Felton, T., Artigas, A., Póvoa, P. M. S. R., Martín‐Loeches, I., Schultz, M. J., et al. (2022) · Figshare · doi:10.6084/m9.figshare.20252815
Yi, X.-Z., Yang, J.-H., Huang, Y., Han, X.-R., Li, H.-M., Cen, L.-J., Lin, Z.-H., Pan, C.-X., Wang, Z., & Guan, W.-J. (2024) · Figshare · doi:10.6084/m9.figshare.26635011
Metadata
- Authors
- Huffnagle, G. B., Dickson, R. P., & Lukacs, N. W.
- Affiliations
- University of Michigan (US)
- Corresponding author
- Huffnagle, G.B.
- Venue
- Mucosal Immunology
- Publisher
- Elsevier BV
- Published
- 2017-03
- Volume
- 10
- Issue
- 2
- Pages
- 299-306
- ISSN
- 1933-0219 (ISSN-L)
- PMC
- PMC5765541
- OpenAlex
- W2561758149
- Cited by
- 535
- References
- 75
- Citations by year
- 2026: 42 · 2025: 60 · 2024: 73 · 2023: 60 · 2022: 84 · 2021: 94 · 2020: 61 · 2019: 21 · 2018: 26 · 2017: 12
- FWCI
- 1.78
- Type
- journal article
- Language
- en
- Open access
- bronze
- doi.org
- Licence
- Locations
- Mucosal Immunology (publishedVersion)
- PubMed (publishedVersion)
- Europe PMC (PubMed Central) (acceptedVersion)
- PubMed Central (acceptedVersion)
- Funders
- University of Michigan (UL1TR000433)
- National Institutes of Health (UL1TR000433)
- National Heart, Lung, and Blood Institute (U01HL098961, ROI-HL114447, R01HL114858, K23HL130641, R01HL114447, T32HL007749)
- National Institute of Allergy and Infectious Diseases (AI-036302, R01AI036302)
- National Center for Advancing Translational Sciences
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Gut microbiota and health
- Health Sciences › Dentistry › Periodontics › Oral microbiology and periodontitis research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Bacterial biofilms and quorum sensing
- Keywords
- airway microbiome, lung inflammation, Gammaproteobacteria, Gram-negative pathogens, Prevotella, mucus, vascular permeability, host-microbe interactions, chronic inflammation, pneumonia, microaspiration
- MeSH terms
- Animals, Capillary Permeability, Homeostasis, Humans, Lung Diseases, Pneumonia, Respiratory System, Prevotella, Gammaproteobacteria, Host-Pathogen Interactions, Microbiota, Dysbiosis
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