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CRISPR-Cas and restriction–modification systems are compatible and increase phage resistance
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A Programmable Dual-RNA–Guided DNA Endonuclease in Adaptive Bacterial Immunity
Jinek, M., Chylinski, K., Fonfara, I., Hauer, M., Doudna, J. A., & Charpentier, E. (2012) · Science · doi:10.1126/science.1225829 · Cited by 17,116
Multiplex Genome Engineering Using CRISPR/Cas Systems
Cong, L., Ran, F. A., Cox, D., Lin, S., Barretto, R., Habib, N., Hsu, P. D., Wu, X., Jiang, W., Marraffini, L. A., et al. (2013) · Science · doi:10.1126/science.1231143 · Cited by 15,339
RNA-Guided Human Genome Engineering via Cas9
Mali, P., Yang, L., Esvelt, K. M., Aach, J., Guell, M., DiCarlo, J. E., Norville, J. E., & Church, G. M. (2013) · Science · doi:10.1126/science.1232033 · Cited by 9,210
CRISPR Provides Acquired Resistance Against Viruses in Prokaryotes
Barrangou, R., Fremaux, C., Deveau, H., Richards, M., Boyaval, P., Moineau, S., Romero, D. A., & Horvath, P. (2007) · Science · doi:10.1126/science.1138140 · Cited by 5,947
Self-citationRepurposing CRISPR as an RNA-Guided Platform for Sequence-Specific Control of Gene Expression
Qi, L. S., Larson, M. H., Gilbert, L. A., Doudna, J. A., Weissman, J. S., Arkin, A. P., & Lim, W. A. (2013) · Cell · doi:10.1016/j.cell.2013.02.022 · Cited by 5,016
Efficient genome editing in zebrafish using a CRISPR-Cas system
Hwang, W. Y., Fu, Y., Reyon, D., Maeder, M. L., Tsai, S. Q., Sander, J. D., Peterson, R. T., Yeh, J.-R. J., & Joung, J. K. (2013) · Nature Biotechnology · doi:10.1038/nbt.2501 · Cited by 2,937
CRISPR/Cas, the Immune System of Bacteria and Archaea
Horvath, P., & Barrangou, R. (2010) · Science · doi:10.1126/science.1179555 · Cited by 2,465
RNA-guided editing of bacterial genomes using CRISPR-Cas systems
Jiang, W., Bikard, D., Cox, D., Zhang, F., & Marraffini, L. A. (2013) · Nature Biotechnology · doi:10.1038/nbt.2508 · Cited by 2,429
Bacteriophage resistance mechanisms
Labrie, S. J., Samson, J. E., & Moineau, S. (2010) · Nature Reviews Microbiology · doi:10.1038/nrmicro2315 · Cited by 2,397
Self-citationEvolution and classification of the CRISPR–Cas systems
Makarova, K. S., Haft, D. H., Barrangou, R., Brouns, S. J. J., Charpentier, E., Horvath, P., Moineau, S., Mojica, F. J. M., Wolf, Y. I., Yakunin, A. F., et al. (2011) · Nature Reviews Microbiology · doi:10.1038/nrmicro2577 · Cited by 2,331
Self-citationThe CRISPR/Cas bacterial immune system cleaves bacteriophage and plasmid DNA
Garneau, J. E., Dupuis, M.-È., Villion, M., Romero, D. A., Barrangou, R., Boyaval, P., Fremaux, C., Horvath, P., Magadán, A. H., & Moineau, S. (2010) · Nature · doi:10.1038/nature09523 · Cited by 2,328
Self-citationRNA-guided genetic silencing systems in bacteria and archaea
Wiedenheft, B., Sternberg, S. H., & Doudna, J. A. (2012) · Nature · doi:10.1038/nature10886 · Cited by 1,851
Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems
DiCarlo, J. E., Norville, J. E., Mali, P., Rios, X., Aach, J., & Church, G. M. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt135 · Cited by 1,566
Short motif sequences determine the targets of the prokaryotic CRISPR defence system
Mojica, F. J. M., Díez-Villaseñor, C., García-Martínez, J., & Almendros, C. (2009) · Microbiology · doi:10.1099/mic.0.023960-0 · Cited by 1,426
Phage Response to CRISPR-Encoded Resistance in Streptococcus thermophilus
Deveau, H., Barrangou, R., Garneau, J. E., Labonté, J., Fremaux, C., Boyaval, P., Romero, D. A., Horvath, P., & Moineau, S. (2008) · Journal of Bacteriology · doi:10.1128/jb.01412-07 · Cited by 1,213
Self-citationGrissa, I., Vergnaud, G., & Pourcel, C. (2007) · BMC Bioinformatics · doi:10.1186/1471-2105-8-172 · Cited by 888
Here a virus, there a virus, everywhere the same virus?
Breitbart, M., & Rohwer, F. (2005) · Trends in Microbiology · doi:10.1016/j.tim.2005.04.003 · Cited by 854
Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system
Bondy-Denomy, J., Pawluk, A., Maxwell, K. L., & Davidson, A. R. (2013) · Nature · doi:10.1038/nature11723 · Cited by 830
Diversity, Activity, and Evolution of CRISPR Loci in Streptococcus thermophilus
Horvath, P., Romero, D. A., Coûté-Monvoisin, A.-C., Richards, M., Deveau, H., Moineau, S., Boyaval, P., Fremaux, C., & Barrangou, R. (2008) · Journal of Bacteriology · doi:10.1128/jb.01415-07 · Cited by 780
Self-citation5500 Phages examined in the electron microscope
Ackermann, H.-W. (2007) · Archives of Virology · doi:10.1007/s00705-006-0849-1 · Cited by 752
RESTRICTION AND MODIFICATION SYSTEMS
Wilson, G. G., & Murray, N. E. (1991) · Annual Review of Genetics · doi:10.1146/annurev.ge.25.120191.003101 · Cited by 714
The phage‐host arms race: Shaping the evolution of microbes
Stern, A., & Sorek, R. (2011) · BioEssays · doi:10.1002/bies.201000071 · Cited by 527
Defense Islands in Bacterial and Archaeal Genomes and Prediction of Novel Defense Systems
Makarova, K. S., Wolf, Y. I., Snir, S., & Koonin, E. V. (2011) · Journal of Bacteriology · doi:10.1128/jb.05535-11 · Cited by 489
Comparative genomics of defense systems in archaea and bacteria
Makarova, K. S., Wolf, Y. I., & Koonin, E. V. (2013) · Nucleic Acids Research · doi:10.1093/nar/gkt157 · Cited by 435
REBASE: restriction enzymes and methyltransferases
Roberts, R. J. (2003) · Nucleic Acids Research · doi:10.1093/nar/gkg069 · Cited by 301
Dam methylation: coordinating cellular processes
Løbner-Olesen, A., Skovgaard, O., & Marinus, M. G. (2005) · Current Opinion in Microbiology · doi:10.1016/j.mib.2005.02.009 · Cited by 252
RNA processing enables predictable programming of gene expression
Qi, L., Haurwitz, R. E., Shao, W., Doudna, J. A., & Arkin, A. P. (2012) · Nature Biotechnology · doi:10.1038/nbt.2355 · Cited by 199
REBASE--restriction enzymes and DNA methyltransferases
Roberts, R. J. (2004) · Nucleic Acids Research · doi:10.1093/nar/gki029 · Cited by 141
Cleavage of Phage DNA by the Streptococcus thermophilus CRISPR3-Cas System
Magadán, A. H., Dupuis, M.-È., Villion, M., & Moineau, S. (2012) · PLoS ONE · doi:10.1371/journal.pone.0040913 · Cited by 112
Self-citationYoung, J. C., Dill, B. D., Pan, C., Hettich, R. L., Banfield, J. F., Shah, M. B., Fremaux, C., Horvath, P., Barrangou, R., & VerBerkmoes, N. C. (2012) · PLoS ONE · doi:10.1371/journal.pone.0038077 · Cited by 91
Levesque, C. M., Duplessis, M., Labonté, J., Labrie, S., Fremaux, C., Tremblay, D. M., & Moineau, S. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.7.4057-4068.2005 · Cited by 91
Self-citationMoineau, S., Walker, S. A., Vedamuthu, E. R., & Vandenbergh, P. A. (1995) · Applied and Environmental Microbiology · doi:10.1128/aem.61.6.2193-2202.1995 · Cited by 71
Self-citationCerritelli, S. M., Springhorn, S. S., & Lacks, S. A. (1989) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.86.23.9223 · Cited by 63
Burrus, V., Bontemps, C., Decaris, B., & Guédon, G. (2001) · Applied and Environmental Microbiology · doi:10.1128/aem.67.4.1522-1528.2001 · Cited by 62
Buckley, N. D., Vadeboncoeur, C., LeBlanc, D. J., Lee, L. N., & Frenette, M. (1999) · Applied and Environmental Microbiology · doi:10.1128/aem.65.9.3800-3804.1999 · Cited by 56
Broad-Range Bacteriophage Resistance in Streptococcus thermophilus by Insertional Mutagenesis
Lucchini, S., Sidoti, J., & Brüssow, H. (2000) · Virology · doi:10.1006/viro.2000.0499 · Cited by 41
Sequence analysis and characterization of plasmids from Streptococcus thermophilus
Geis, A., Demerdash, H. A. M. E., & Heller, K. J. (2003) · Plasmid · doi:10.1016/s0147-619x(03)00029-5 · Cited by 38
Effects of DNA Methylation on Expression of Virulence Genes in Streptococcus mutans
Banas, J. A., Biswas, S., & Zhu, M. Y. (2011) · Applied and Environmental Microbiology · doi:10.1128/aem.00543-11 · Cited by 33
The double-edged sword of CRISPR-Cas systems
Villion, M., & Moineau, S. (2012) · Cell Research · doi:10.1038/cr.2012.124 · Cited by 10
Self-citation
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The arms race between bacteria and their phage foes
Hampton, H. G., Watson, B. N. J., & Fineran, P. C. (2020) · Nature · doi:10.1038/s41586-019-1894-8 · Cited by 917
The CRISPR-Cas immune system: Biology, mechanisms and applications
Rath, D., Amlinger, L., Rath, A., & Lundgren, M. (2015) · Biochimie · doi:10.1016/j.biochi.2015.03.025 · Cited by 471
The Ecology and Evolution of Pangenomes
Brockhurst, M. A., Harrison, E., Hall, J. P. J., Richards, T., McNally, A., & MacLean, C. (2019) · Current Biology · doi:10.1016/j.cub.2019.08.012 · Cited by 385
Oliveira, P. H., Touchon, M., & Rocha, E. P. C. (2014) · Nucleic Acids Research · doi:10.1093/nar/gku734 · Cited by 354
Discovery of phage determinants that confer sensitivity to bacterial immune systems
Stokar-Avihail, A., Fedorenko, T., Hör, J., Garb, J., Leavitt, A., Millman, A., Shulman, G., Wojtania, N., Melamed, S., Amitai, G., et al. (2023) · Cell · doi:10.1016/j.cell.2023.02.029 · Cited by 176
Metadata
- Authors
- Dupuis, M.-È., Villion, M., Magadán, A. H., & Moineau, S.
- Venue
- Nature Communications
- Published
- 2013-07-02
- Volume
- 4
- Issue
- 1
- Pages
- 2087-2087
- ISSN
- 2041-1723 (ISSN-L)
- OpenAlex
- W2036005489
- Cited by
- 288
- References
- 39
- FWCI
- 5.65
- Type
- journal article
- Language
- en
- Open access
- bronze
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