Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins
Mattis, Joanna, Tye, Kay M, Ferenczi, Emily A, Ramakrishnan, Charu, O'Shea, Daniel J, Prakash, Rohit, Gunaydin, Lisa A, Hyun, Minsuk +4 more·2012·Nature Methods
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Items 601–700 of 778
- Ex Vivo Optogenetic Interrogation of Long-Range Synaptic Transmission and Plasticity from Medial Prefrontal Cortex to Lateral Entorhinal CortexLisa Kinnavane, Paul James Banks · 2022 · Journal of Visualized Experiments
- Glutamatergic neurons from the medial prefrontal cortex to the dorsal raphe nucleus regulate maternal aggression in lactating miceYoshikage Muroi, Toshiaki Ishii · 2022 · Neuroscience Research
- Gene Targeting in NeuroendocrinologyMichael Candlish, Roberto De Angelis, Viktoria Götz, Ulrich Boehm · 2015 · Comprehensive physiology
- Quantifying Changes in Pain Sensitivity Using Reproducible Transcutaneous Optogenetic Stimulation in Behaving MiceYu‐Feng Xie, Christopher Dedek, Steven A. Prescott · 2026 · Journal of Neuroscience
- Employing Optogenetics in Memory ResearchLimor Regev, Inbal Goshen · 2017 · Neuromethods
- Implantable Wireless Neural Interface for Multichannel Neural Recording and Optogenetic NeuromodulationDaeho Ryu, Saeyoung Jeon, Yong-Kweon Kim, Sang Beom Jun, Chang‐Hyeon Ji · 2019 · International Conference on Optical MEMS and Nanophotonics
- Network-level effects of optogenetic stimulation in a computer model of macaque primary motor cortexCliff C. Kerr, Daniel J. O’Shea, Werapong Goo, Salvador Durá-Bernal, Joseph Thachil Francis, Ilka Diester, Paul S. A. Kalanithi, Karl A. Deisseroth, K.V. Shenoy, William W. Lytton · 2014 · BMC Neuroscience
- Current Genetic Techniques in Neural Circuit Control of Feeding and Energy MetabolismQi Wu, Yong Han, Qingchun Tong · 2018 · Advances in experimental medicine and biology
- OptogeneticsPaul S. A. Kalanithi, David Arnold Purger · 2017 · Elsevier eBooks
- OptogeneticsLouisa Lyon · 2013 · Materials and Methods
- Bewegungssehen: Zellen, Schaltkreise und AlgorithmenGiordano Ramos-Traslosheros, Miriam Henning, Marion Silies · 2018 · e-Neuroforum
- Innovative device illuminates the horizon of bioelectronic medicinesWarren M. Grill, Jennifer J. DeBerry · 2019 · Nature Reviews Urology
- Novel Organic Light Emitting Diodes for Optogenetic ExperimentsAnkur Shah · 2015 · Arizona State University Library Digital Repository (Arizona State University)
- The fasciola cinereum subregion of the hippocampus is important for the acquisition of visual contextual memorySeong‐Beom Park, Eunyoung Lee, Heung‐Yeol Lim, Seung-Woo Yoo, Eunsoo Lee, Hyun-Suk Jung, Woong Sun, Inah Lee · 2019 · bioRxiv (Cold Spring Harbor Laboratory)
- Optogenetic stimulation of the cochleaDavid López de la Morena · 2019
- Ionic control of porin permeability in bacteriaSantiago E. Caño Muñiz, Anja Hagting, Ieuan Evans, Ali F. Alsulami, David Summers, Tom L. Blundell, R. Andrés Floto · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Cryo-EM structure of a blue-shifted channelrhodopsin from Klebsormidium nitensYuzhu Z. Wang, Koki Natsume, Tatsuki Tanaka, Shoko Hososhima, Rintaro Tashiro, Fumiya K. Sano, Hiroaki Akasaka, Satoshi P. Tsunoda, Wataru Shihoya, Hideki Kandori et al. · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
- Medial prefrontal cortex input to lateral entorhinal cortex supports both encoding and retrieval of associative recognition memoryLisa Kinnavane, Gareth RI Barker, Paul James Banks, Zafar Iqbal Bashir, Elizabeth Clea Warburton · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- The differential effect of optogenetic serotonergic manipulation on sustained motor actions and waiting for future rewards in miceMasakazu Taira, Kayoko W. Miyazaki, Katsuhiko Miyazaki, Jianning Chen, Shiho Okitsu-Sakurayama, Anupama Chaudhary, Mika Nishio, Tsukasa Miyake, Akihiro Yamanaka, Kenji F. Tanaka et al. · 2024 · Frontiers in Neuroscience
- Flexible modeling of large-scale neural network stimulation: Electrical and optical extensions to The Virtual Electrode Recording Tool for EXtracellular Potentials (VERTEX)Anne F. Pierce, Larry Shupe, Julien Bloch, Eberhard E. Fetz, Azadeh Yazdan-Shahmorad · 2024 · Journal of Neuroscience Methods
- Toward biomimetic optogenetics: Drug-free activation of acute opiate rewardLyla El-Fayomi, Hendrik W. Steenland, Sabine Lovejoy, Michael Bergamini, Derek van der Kooy · 2025 · iScience
- Implantable Light‐Powered Human Designer Cells for Electrical Energy GenerationShuai Xue, Zhihua Lin, Debasis Maity, Preetam Guha Ray, Mingqi Xie, Martin Fussenegger · 2025 · Advanced Materials
- Developmental embedding of parvalbumin-positive interneurons drives local and crosshemispheric prefrontal gamma synchronyAnton Offermanns, Jastyn A. Pöpplau, Ileana L. Hanganu‐Opatz · 2025 · Progress in Neurobiology
- Desensitization of opsin responses during all-optical interrogation depends on imaging parametersBlake Russell, Robert M. Lees, Armin Lak, Adam M. Packer · 2026 · Neurophotonics
- The role of dopamine-sensitive motor cortical circuits in the development and execution of skilled forelimb movementsMartyna Gorkowska, Gniewosz Drwiȩga, Łukasz Szumiec, Jan M. Rodriguez Parkitna, Przemysław Eligiusz Cieślak · 2026 · iScience
- A Stretchable Optogenetic Probe for Wireless Control of Bladder NociceptionJanghoon Joo, Hannah A. Anderson, Wooseok Kim, Shane H Priester, Bogeun Kim, Firoj Alom, Doyoung Kim, Bhavana Talluri, Hee Kyu Lee, Joohoon Kang et al. · 2026 · Engineering
- Substance P regulates Tacr1 neurons, which control nitric oxide–mediated neurovascular coupling in the mouse cortexFernanda Juarez Anaya, Jiwon Kim, Sarah E. Ross, Alberto L. Vazquez · 2026 · Science Advances
- Micro-LEDs in biomedicine: from implantable optogenetics to intelligent theranosticsYihan Huang, Huaqi Liu, Yun Lin, Junwei Hu, Zou Li, Shula Chen, Ouying Chen, Xiaoyan Yi, Liancheng Wang · 2026 · Journal of Semiconductors
- Optogenetic control of arousal neuronsAntoine Adamantidis, Matthew E. Carter, Luı́s de Lecea · 2013 · Cambridge University Press eBooks
- Geneticsof sleep and circadian rhythmsPaul J. Shaw, Mehdi Tafti, Michael J. Thorpy · 2013 · Cambridge University Press eBooks
- Flexible Electronics and Display Technology for Medical, Biological, and Life Science ApplicationsJoseph T. Smith · 2014
- Optogenetic Approaches to Restoring Intrinsic Visual Processing Features in Retinal Ganglion CellsZhuo‐Hua Pan, Anding Bi, Qi Lu · 2015 · Springer eBooks
- Optogenetic Dissection of Sleep-Wake Circuits in the BrainThomas C. Gent, Antoine Adamantidis · 2015 · Springer eBooks
- Viral Vector-Based Techniques for Optogenetic Modulation In VivoMathias Mahn, Shiri Ron, Ofer Yizhar · 2013 · Neuromethods
- Acute Optogenetic Modulation of Cardiac Twitch Dynamics Explored Through ModelingYasser Aboelkassem, Stuart G. Campbell · 2016 · Journal of Biomechanical Engineering
- Injection of Adeno-Associated Virus Containing Optogenetic and Chemogenetic Probes into the Neonatal Mouse BrainNhan C. Huynh, Baher A. Ibrahim, Christopher M. Lee, Mickeal N. Key, Daniel A. Llano · 2019 · Neuromethods
- Why does Impact Factor still have impact?David Gibbes Miller · 2013 · Physiology News
- Studying Neuronal Function Ex Vivo Using Optogenetic Stimulation and Patch ClampAyla Aksoy‐Aksel, Julien Genty, Martin Zeller, Ingrid Ehrlich · 2020 · Methods in molecular biology
- Optogenetics: Novel Brain Interface Technology That Originates in BioprospectingRamin Pashaie · 2020 · Springer eBooks
- Optogenetics in Complex Model Systems (Non-Human Primate)Robijanto Soetedjo, Yoshiko Kojima · 2022 · Neuromethods
- KCa1.1 channels contribute to optogenetically driven post-stimulation silencing in cerebellar molecular layer interneuronsMerouann Kassa, Jonathan Bradley, Abdelali Jalil, Isabel Llano · 2022 · The Journal of General Physiology
- Spatial and Temporal Considerations of Optogenetic Tools in an All-Optical Single-Beam ExperimentDamaris Holder, Matthias Prigge · 2023 · Neuromethods
- Characterization of the tail current of Channelrhodopsin-2 variantsTiShang Zheng, HengQi Wei, Congjian Zhao · 2024 · Biochemistry and Biophysics Reports
- Specific parvalbumin-positive optogenetic stimulations in specific brain regions restore navigational flexibility in an acute MK801 mouse model of schizophreniaEnrico Patrono, Daniela Černotová, Jan Svoboda, Aleš Stuchlı́k · 2025 · Neuroscience
- Optogenetic and Chemogenetic Tools for Drug Discovery in SchizophreniaDennis Kätzel, Dimitri Michael Kullmann · 2015 · Royal Society of Chemistry eBooks
- Highly Multiplexed Nanophotonic Probes With Independently Controllable Emitters for Optogenetic Brain StimulationEran Segev, Laurent C. Moreaux, Jacob Reimer, Trevor M. Fowler, Derrick Chi, Wesley D. Sacher, Maisie Lo, Karl A. Deisseroth, Andreas Savas Tolias, Andrei Faraon et al. · 2016 · Conference on Lasers and Electro-Optics
- Optogenetics Research in Behavioral Neuroscience: Insights into the Brain Basis of Reward Learning and Goal-directed BehaviorAdam C. G. Crego, Stephen E. Chang, William N. Butler, Kyle S. Smith · 2017 · Cambridge University Press eBooks
- Neuromodulation Using Optogenetics and Related TechnologiesNigel P. Pedersen, Robert E. Gross · 2018 · Elsevier eBooks
- Optogenetics Dissection of Sleep Circuits and FunctionsCornelia Schöne, Antoine Adamantidis · 2018 · Elsevier eBooks
- Perturbations in the Activity of Cholinergic Interneurons in the Dorsomedial Striatum Impairs the Update of Actions to an Instrumental Contingency ChangeHector Alatriste-León, Anil K Verma-Rodríguez, Josué O. Ramírez‐Jarquín, Fatuel Tecuapetla · 2019 · Neuroscience
- Optogenetics: An updateSergey Kasparov, Sam Lane, Anja G. Teschemacher · 2013 · Physiology News
- Selecting Channelrhodopsin Constructs for Optimal Visual Restoration in Differing Light ConditionsTushar H. Ganjawala, Zhuo‐Hua Pan · 2020 · Methods in molecular biology
- Channelrhodopsin-2 Assisted Circuit Mapping in the Spinal Cord Dorsal HornKelly M. Smith, Brett Anthony Graham · 2022 · Neuromethods
- Anatomical and functional characterization of serotonergic neurocircuitryIskra Pollak Dorocic · 2016 · Figshare
- Behavioral Phenotyping Using Optogenetic TechnologyStephen D. Glasgow, Carolina Gutierrez Herrera, Antoine Adamantidis · 2017
- Top-down attention: neural pathways in the human and non-human primate examined by electrophysiology, optogenetics and psychophysicsJanina Hüer · 2019
- Obituary: Marianne Fillenz (1924 – 2013)John Frederick Stein · 2013 · Physiology News
- Optogenetically Induced Spatiotemporal Gamma Oscillations in Visual CortexArab, Fereshteh, Sareh Rostami, Mohammad Dehghani-Habibabadi, Vahid Salari, Mir-Shahram Safari · 2021 · arXiv (Cornell University)
- Brainstem cholinergic modulation of the thalamocortical activity in urethane anesthetized miceY. Audrey Hay · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Bioluminescent Synthetic Cells Communicate with Natural Cells and Self-Activate Light-Responsive ProteinsOmer Adir, Ravit Abel, Mia R. Albalak, Lucien E. Weiss, Gal Chen, Amit Gruber, Oskar Staufer, Jeny Shklover, Janna Shainsky‐Roitman, Ilia Platzman et al. · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Improved Version of ChETA Promotes Aggression in the Medial AmygdalaRongfeng K. Hu, Patrick B. Chen, A. Berndt, David J. Anderson, Weizhe Hong · 2022 · bioRxiv (Cold Spring Harbor Laboratory)
- Temporal weighting of cortical and subcortical spikes reveals stimulus dependent differences in their contributions to behaviorJackson J. Cone, Autumn O. Mitchell, Rachel K. Parker, John H. R. Maunsell · 2023 · bioRxiv (Cold Spring Harbor Laboratory)
- Integration of distinct cortical inputs to primary and higher order inhibitory cells of the thalamusChristian Puzzo, Rosa I. Martinez-Garcia, H Liu, Levi F. Dyson, William O. Gilbert, Scott J. Cruikshank · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
- WAChRs are excitatory opsins sensitive to indoor lightingAmanda J. Tose, Alberto A. Nava, Sara N. McGrath, Alan R. Mardinly, Alexander Naka · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Synaptic activity controls local exposure of an ‘eat-me’ signal via ANO3-ITPR1 signalingKunal Shroff, Molly C O'Brien, Tyler J. Smith, Jialing Fang, Kelly S Yu, Sonia I Lombroso, Shengjie Feng, Chao Chen, Gregory A. Mohl, Indigo V.L. Rose et al. · 2026 · bioRxiv (Cold Spring Harbor Laboratory)
- Dissecting Neural Circuits for Vision in Nonhuman Primates using fMRI-Guided Electrophysiology and OptogeneticsShay Ohayon · 2014 · CaltechTHESIS (California Institute of Technology)
- Delivery of time-varying stimuli using ChR2Tatjana Tchumatchenko, Jonathan P. Newman, Ming‐fai Fong, Steve M. Potter · 2013 · arXiv (Cornell University)
- An Optogenetic Brain-machine Interface for Spatiotemporal NeuromodulationRyan Baumgartner · 2014 · UWM Digital Commons (University of Wisconsin–Milwaukee)
- Engineering microbial rhodopsins to expand the optogenetic toolkitVeena Venkatachalam · 2014 · Digital Access to Scholarship at Harvard (DASH) (Harvard University)
- Future focal treatment approaches to epilepsyLaura Mantoan Ritter, Hannah R. Cock · 2015
- Télécommander l’activité des canaux ioniques endogènes par la lumièreGuillaume Sandoz, Ehud Y. Isacoff · 2012 · médecine/sciences
- The Rich World of Applicable Algal PhotoreceptorsArash Kianianmomeni · 2012 · Journal of Physical Chemistry & Biophysics
- Opto-mechanical control of nerve growthSeongjun Park · 2015 · DSpace@MIT (Massachusetts Institute of Technology)
- Discovery and Development of Spectrally Diverse Channelrhodopsins (ChR) for Neurobiological ApplicationsJohn Y. Lin, Per Magne Knutsen, Arnaud Muller · 2015 · Biological and medical physics, biomedical engineering
- Advancing Fear Memory Research with OptogeneticsInbal Goshen, Anat Shapir, Yanir Mor · 2015 · Elsevier eBooks
- Optogenetic Control of Heart MuscleEmilia G. Entcheva, Ira S. Cohen · 2013 · Elsevier eBooks
- Neocortical Circuit Interrogation with OptogeneticsLief E. Fenno, Karl A. Deisseroth · 2013 · Neuromethods
- Optogenetic Dissection of Neural Circuit Function in Behaving AnimalsCarolina Gutierrez Herrera, Antoine Adamantidis, Feng Zhang, Karl A. Deisseroth, Luı́s de Lecea · 2014 · Neuromethods
- 3D Monte Carlo model with direct photon flux recording for optimal optogenetic light deliveryYounghoon Shin, Dongmok Kim, Jihoon Lee, Hyuk-Sang Kwon · 2017 · Proceedings of SPIE, the International Society for Optical Engineering/Proceedings of SPIE
- Revolutionizing Causal Circuitry Neurostimulation Utilizing the Optogenetic Technique Through Advanced Microsystems DevelopmentRajas P. Kale, Seungleal Brian Paek, Susannah J. Tye, Abbas Z. Kouzani · 2017 · Series in bioengineering
- Engineering Biological Systems for LightToru Ishizuka, Ryo Egawa, Keiko Umeda, Wataru Shoji, Hiromu Yawo · 2015 · Seibutsu Butsuri
- Optogenetik: Eine neue Methodik zur kausalen Analyse neuronaler Netzwerke in vivoAlbrecht Stroh, Ilka Diester · 2012 · e-Neuroforum
- Tuning for light and more : engineering phototrophy and membrane proteins in Escherichia coliNico J. Claassens · 2017
- Optogenetic Approaches to Investigating Brain CircuitsAlexander M. Herman, Jay M Patel, Benjamin Russell Arenkiel · 2017 · Cambridge University Press eBooks
- Determination of the Dynamic Gain Function of Cortical Interneurons with distinct Electrical TypesRicardo Martins Merino · 2017
- Expanding the optogenetic toolkit with a photocleavable protein and a near infrared pH indicatorWei Zhang · 2017 · ERA: Education and Research Archive (University of Alberta)
- Optogenetics: Applications in neurobiologyMaria A. Mikhailova, Alex L. Deal, Evgeny A. Budygin, Raul R. Gainetdinov · 2017 · Biological Communications
- Micro-fabricated implantable hybrid neural interfaces for optogeneticsKi Yong Kwon · 2014
- The Effects of Dopamine on Frequency Dependent Short Term Synaptic Plasticity: A Comparison of Layer Contributions and Rhythmic DynamicsJonna Marie Jackson · 2017 · Scholarship & Creative Works - Digital UNC a service of University Libraries (University of Northern Colorado)
- Book review - Everest: The First Ascent By Harriet TuckeyAustin Elliot · 2013 · Physiology News
- Optogenetic Inhibition of the mPFC During Delay DiscountingShelby White · 2019 · Figshare
- Neural Control of Respiration by the Retrotrapezoid Nucleus.Tyler M. Basting · 2016
- Engineering Affinity and Specificity of Antibodies Targeting Protein ModificationsDan Li · 2019 · OpenCommons at University of Connecticut (University of Connecticut)
- Mapping the cell-surface proteome underlying hippocampal mossy fiber synapse identityNuno Apóstolo, Samuel N. Smukowski, Julie Vanderlinden, Giuseppe Condomitti, Vasily Rybakin, Jolijn ten Bos, Sybren Portegies, Kristel M. Vennekens, Natalia V. Gounko, Keimpe D. B. Wierda et al. · 2019 · Greater South Information System
- Q&A: Gero MiesenböckGero Miesenböck · 2013 · Physiology News
- Meeting Notes: Young Life Scientists’ Symposium 2013Andrew Leese · 2013 · Physiology News
- Brain-Heart Interactions in Health and Disease – a symposium in honour of John CooteT.A. Lovick · 2013 · Physiology News
- The sympathetic nervous system and control of resting blood flow in adults with metabolic syndromeJacqueline K. Limberg, Barbara J. Morgan, William G. Schrage · 2013 · Physiology News
- Meeting Notes: Talking Physiology in IndiaRichard D. Vaughan‐Jones · 2013 · Physiology News
- Meeting Notes: ‘DABfest’Sue Jones, ANNETTE C. DOLPHIN, Mala M. Shah, Trevor G. Smart · 2013 · Physiology News