Principles for applying optogenetic tools derived from direct comparative analysis of microbial opsins
Mattis, Joanna, Tye, Kay M, Ferenczi, Emily A, Ramakrishnan, Charu, O'Shea, Daniel J, Prakash, Rohit, Gunaydin, Lisa A, Hyun, Minsuk +4 more·2012·Nature Methods
Cited by (778)
Items 701–778 of 778
- Vacation StudentshipsSam Bose, Jonathan Raby · 2013 · Physiology News
- Obituary: Maureen YoungAbigail L. Fowden · 2013 · Physiology News
- Meeting Notes: The ‘H+SSS’ing of Summer LawnsRichard D. Vaughan‐Jones · 2013 · Physiology News
- CGRP neurons and the neural circuitry underlying conditioned taste aversionJane Chen · 2019 · ResearchWorks at the University of Washington (University of Washington)
- The lateral periaqueductal gray and its role in controlling predatory hunting and social defense.Ignacio Marin‐Blasco, Miguel J. Rangel, Marcus Vinícius C. Baldo, Simone Cristina Motta, Lisa Stowers, Newton Sabino Canteras · 2020
- Differential optogenetic excitation of the auditory midbrain in freely moving behaving miceMeike M. Rogalla, Adina Seibert, K. Jannis Hildebrandt · 2021 · bioRxiv (Cold Spring Harbor Laboratory)
- Optogenetic Control of ArrhythmiasBalázs Ördög, Antoine A.F. de Vries, Daniël A. Pijnappels · 2021 · Springer eBooks
- Arrhythmia termination using Global Optogenetic Stimulation in ChR2 mice heartsRaúl A. Quiñonez Uribe · 2021
- Complexity and Computation at the Synapse: Multilayer Architecture and Role of Diffusion in Shaping Synaptic Activity and ComputationAndrea Barberis, Fabio Benfenati · 2014 · Springer eBooks
- Optogenetic stimulation of the basolateral amygdala accelerates acquisition of object-context associations.Lauren E. DiFazio, David S. Reis, Joseph R. Manns · 2021 · Behavioral Neuroscience
- All-optical approaches to studying psychiatric diseaseChristopher K. Lafferty, Thomas Christinck, Jonathan P. Britt · 2021 · Methods
- Optical Neural Interfaces2019 · Frontiers research topics
- Optogenetic Stimulation of Medial Amygdala GABA Neurons With Kinetically Different Channelrhodopsin Variants Yield Opposite Behavioral OutcomesAiste Baleisyte, Ralf Schneggenburger, Olexiy Kochubey · 2021 · SSRN Electronic Journal
- In vivo Optogenetic Stimulation of the Rodent Central Nervous SystemMichelle M. Sidor, Thomas J. Davidson, Kay M. Tye, Melissa R. Warden, Karl Diesseroth, Colleen A. McClung · 2015 · Journal of Visualized Experiments
- Mechanisms of local and global motion detection in DrosophilaMiriam Henning · 2021
- Neural population dynamics and frontal-parietal circuit for context-dependent sensorimotor computationsHao Guo · 2020
- Engineering rhodopsins’ activation spectra using a FRET-based approachConnor Beck, Yiyang Gong · 2022 · Biophysical Journal
- Hit the endothelial layer of your skeletal muscle microvessels with HIT to prevent impaired glucose tolerance and chronic diseaseAnton J. M. Wagenmakers, Matthew S. Cocks · 2013 · Physiology News
- Biology Week & Physiology Friday2013 · Physiology News
- Policy Corner2013 · Physiology News
- Meeting Preview: Physiology 20142013 · Physiology News
- OptogeneticsMichelle M. Sidor, Melissa R. Warden · 2014 · Springer eBooks
- OptogeneticsMichelle M. Sidor, Melissa R. Warden · 2015 · Springer eBooks
- Optogenetics and Related Technologies for Psychiatric Disease ResearchLief E. Fenno, Karl A. Deisseroth · 2017 · Oxford University Press eBooks
- EditorialMike Collis · 2013 · Physiology News
- OptogeneticsEhud Y. Isacoff, Andreas Reiner · 2015 · Elsevier eBooks
- Faculty Opinions recommendation of Direct optogenetic stimulation of smooth muscle cells to control gastric contractility.Gemma Mazzuoli‐Weber, Ronja Schliep · 2021 · Faculty Opinions – Post-Publication Peer Review of the Biomedical Literature
- Neuroscience 2013Nick Boross-Toby, Sally Howells · 2013 · Physiology News
- Vision: Optogenetics Addressing AMD DiseasesLeila Montazeri, Chuanqing Wang, Mohamad Sawan · 2022 · Handbook of Neuroengineering
- OptogeneticsEhud Y. Isacoff, Andreas Reiner · 2022 · Elsevier eBooks
- Viruses for Systemic DeliveryZikai Wang, Alon Greenbaum, Jennifer B. Treweek · 2023 · Neuromethods
- Vision: Optogenetics Addressing AMD DiseasesLeila Montazeri, Chuanqing Wang, Mohamad Sawan · 2023 · Handbook of Neuroengineering
- Optogenetics: application to central autonomic regulatory pathwaysAndrew Mark Allen, Clément Menuet · 2023 · Elsevier eBooks
- Direct optogenetic stimulation of smooth muscle cells to control gastric contractilityMarkus Vogt · 2023
- Characterization of human Neuropsin (hOPN5) and development of new mutants for optogenetic stimulation of the Gq signaling cascadeUdhayabhaskar Sathyanarayanan · 2024
- Cerebellar Purkinje Cells Control Posture in Larval Zebrafish (Danio rerio)Franziska Auer, Katherine Nardone, Kōji Matsuda, Masahiko Hibi, David Schoppik · 2024 · eLife
- PV+ optogenetic stimulations at specific frequencies in specific brain regions can restore navigational flexibility in an acute MK801 mouse model of schizophreniaEnrico Patrono, Daniela Černotová, Jan Svoboda, Aleš Stuchlı́k · 2024 · bioRxiv (Cold Spring Harbor Laboratory)
- Optogenetics switching control and application for neuromorphic computingNeha Gupta, Vikas Maheshwari, Sukhdev Roy · 2024 · International Conference on Current Trends in Physics and Photonics (ICCTPP)
- From Circuits to Drug Targets: The Promise of Opto- and Chemogenetics for Drug DiscoveryDennis Kätzel · 2024 · Royal Society of Chemistry eBooks
- Cerebellar Purkinje Cells Control Posture in Larval Zebrafish (Danio rerio)Franziska Auer, Katherine Nardone, Kōji Matsuda, Masahiko Hibi, David Schoppik · 2025 · eLife
- Optogenetics and Related Technologies for Psychiatric Disease ResearchLief E. Fenno, Karl A. Deisseroth · 2025 · Oxford University Press eBooks
- Role of Median Raphe Serotonergic Neurons in Positive and Negative Information ProcessingHiroyuki Kawai · 2025 · YAKUGAKU ZASSHI
- Light‐Mediated Insulin and Amylin Secretion: Influence of Irradiation Parameters in Optogenetically Modified Mouse‐Pancreatic β CellsNidhi Maharwal, Rashmi Shrivastava, Khageswar Sahu, Shovan Kumar Majumder · 2025 · Journal of Biophotonics
- Hemodynamic and electrophysiological progression of the Rose Bengal photothrombotic stroke model in mice: vasoactive properties of Rose Bengal, tissue heating, wavelength optimization, and sex differences in lesion volumePatrick Chary, Sarah Rehmani, Simone Davidson, Xiaonan Li, Simon D.M. Chen, Gergely Silasi · 2025 · bioRxiv (Cold Spring Harbor Laboratory)
- Reevaluating the role of the STN-GPe network in generating beta synchronized oscillatory activity in parkinsonismBrice de la Crompe, Marc Deffains, Arthur Leblois, Nicolas P. Mallet · 2025 · Handbook of behavioral neuroscience
- Current and emerging tools for studying animal models of sleep and autismPhillip Kyriakakis, Oscar Christian Gonzalez · 2025 · Journal of Psychiatric Research
- Additional file 1 of Long-term in vivo application of a potassium channel-based optogenetic silencer in the healthy and epileptic mouse hippocampusPiret Kleis, Enya Paschen, Ute Häussler, Yinth Andrea Bernal Sierra, Carola A. Haas · 2022 · Figshare
- Additional file 1 of Functional organization of the midbrain periaqueductal gray for regulating aversive memory formationYeh, Li-Feng, Takaaki Ozawa, Joshua P. Johansen · 2021 · Figshare
- Additional file 2 of Functional organization of the midbrain periaqueductal gray for regulating aversive memory formationYeh, Li-Feng, Ozawa, Takaaki, Joshua P. Johansen · 2021 · Figshare
- Additional file 2 of Long-term in vivo application of a potassium channel-based optogenetic silencer in the healthy and epileptic mouse hippocampusPiret Kleis, Enya Paschen, Ute Häussler, Yinth Andrea Bernal Sierra, Carola A. Haas · 2022 · Figshare
- 44‐2: Optogenetic Manipulation of Neurons Using Organic Light‐Emitting DiodesKukjoo Kim, Congqi Yang, Yong Hee Kim, Dae Hyun Ahn, Sukyung Choi, Jin-Wook Shin, Jong-Heon Yang, Chun-Won Byun, Sang-Don Jung, Seongjun Park · 2025 · SID Symposium Digest of Technical Papers
- Depth targeted opto-neuromodulation of brain regions: From mechanistic insights to disease modelsYanbo Zhou, Jianjun Yang, Haitao Liu, Daqing Ma · 2025 · Biosensors and Bioelectronics
- Parallel cholinergic circuit in oculomotor nucleus to control EMs and REM sleepChengyong Jiang, Jiayi Zhang · 2026 · Research Square
- Hemodynamic and Electrophysiological Progression of the Rose Bengal Photothrombotic Stroke Model in MicePatrick Chary, Sarah Rehmani, Simone Davidson, Xiaonan Li, Simon X. Chen, Gergely Silasi · 2026 · Journal of Neuroscience
- Réponses des circuits corticaux aux afférences sous-corticales impliquées dans les états de vigilanceY. Audrey Hay · 2014 · theses.fr (ABES)
- Implication des interneurones cholinergiques striataux dans la physiopathologie de la maladie de Parkinson : étude optogénétique, pharmacologique et comportementaleSamira Ztaou · 2016 · theses.fr (ABES)
- Modulation of premotor circuits controlling locomotor activity by spinal GABAergic sensory neurons in zebrafish : connectivity mapping of an intraspinal sensory feedback circuitKevin Fidelin · 2016
- Neuronal populations underlying locomotion in zebrafishJenna R. Sternberg · 2016 · theses.fr (ABES)
- Rôle du noyau subthalamique et de ses afférences hyperdirectes provenant du cortex préfrontal dans le codage et la recherche de récompense chez le ratAlix Tiran‐Cappello · 2018
- A new gene therapy approach to restore light sensitivity in Rod-Cone DystrophiesCardillia-Joe Simon · 2019
- Respiratory Adaption to Running Exercise : A Behavioral and Neuronal Circuits Study in MiceCoralie Hérent · 2021
- Contrôle optogénétique du potentiel de membrane et de l'homéostasie calcique dans le modèle musculaire squelettique : impact sur les processus myogéniquesCharles-Albert Chapotte-Baldacci · 2021 · theses.fr (ABES)
- Development of advanced optical systems for spatially and temporally precise brain interrogationClément Molinier · 2021 · theses.fr (ABES)
- Brainstem circuits for locomotor and orienting movements : a functional and connectivity study of V2a neuronsGiovanni Usseglio · 2022
- Evaluation dynamique et fonctionnelle de l'inhibition périsomatique dans le circuit hippocampique au cours du développement normal et pathologique chez la souris in vivoArnaldo Ferreira Gomes Da Silva · 2022 · theses.fr (ABES)
- Dommages de la substance blanche et impact de l'activité axonale sur l'invasion tumorale dans un modèle murin de glioblastomeQuentin Lemercier · 2024 · theses.fr (ABES)
- Val109 and Ile170 contribute to channel function in Guillardia theta-derived anion channelrhodopsinsTakanori Yokoyama, Eriko Sugano, Kitako Tabata, Taira Kakizaki, Shu Maruoka, Yuka Endo, Taku Ozaki, Tomokazu Fukuda, Lanlan Bai, Hiroshi Tomita · 2026 · Scientific Reports
- Bioluminescence Driving OpsinsUte Hochgeschwender · 2026 · Springer eBooks
- Thermal management of flexible MicroLED films for optogenetics using an Ag heat spreading layerHiroto Sekiguchi, Wataru Oda, Kazuto Matsui, Mitsuhiro Yamada, Takemi Hanai, Ruri Kurogi, Alexander Loesing, Atsushi Nishikawa · 2026 · Japanese Journal of Applied Physics
- Flexible MicroLED–electrocorticography sheet for wide-area bidirectional neural interface in miceKazuto Matsui, Ruri Kurogi, Takuya Hikima, Mitsuhiro Yamada, Atsushi Nishikawa, Alexander Loesing, Noriaki Ohkawa, Hiroto Sekiguchi · 2026 · Applied Physics Express
- Mitochondrial fission factor regulates mitochondrial Ca2+ homeostasis and neuronal activity in AgRP neuronsAlmudena Del Río-Martín, Gagik Yeghiazaryan, Rui O. Beleza, Sinika Henschke, Marie Holm Solheim, Paul N. Mirabella, Tamara Sotelo-Hitschfeld, Corinna A. Bauder, Hong Jiang, Weiyi Chen et al. · 2026 · Neuron
- Optogenetic Strategies to Dissect Neuronal Contributions to Neurovascular and Neurometabolic ResponsesAdiya Rakymzhan, Andrew E Toader, Mitsuhiro Fukuda, Alberto L. Vazquez · 2026 · Neuromethods
- Methamphetamine potentiates the use of outcome-specific associations via a hypothalamic-dopamine circuitIvy B. Hoang, Joseph J. Munier, Anna Verghese, Masakazu Taira, Arvie Abiero, Jessica Leake, Adrian Dawson, Mirari V. B. Wilcher, Kiruthika Ganesan, Miriam E. Ortega et al. · 2026 · Neuron
- Crosstalk-free optical indicator-actuator combinations for bidirectional optogeneticsGlena Travis, Hallur Reynisson, Anai Gonzalez-Cordero, Stefano Palomba · 2026 · npj Biomedical Innovations.
- Seizure-Inducible Risks of In Vivo Optogenetic ManipulationsXutao Zhu, Zhijian Zhang, Yu Tian, Li Wang, Yue Liu, Ronghui Li, Pengjie Wen, Jie Wang, Liping Wang, Qing Liu et al. · 2026 · Biology
- Single neurons detect spatiotemporal activity transitions through STP and EI imbalanceAditya Asopa, Upinder S. Bhalla · 2026 · eLife
- Microbial Rhodopsins: Structural–Functional Mechanisms and the Design of Optogenetic Silencing Tools—With Emphasis on Halorubrum ArchaeorhodopsinsChaoluomeng, Yuxia Yang · 2026 · Biology
- Nanomaterial-genetics enables near-infrared-driven genetically targeted neuromodulationYi Liu, Xiaolei Wang, Weiwei Yin, Jiahui Chen, Yu Fan, Jiani Yang, Yu Wang, Lin Ge, Wei Rao, Laiyuan Wang et al. · 2026 · Science Advances