Context-dependent control of alternative splicing by RNA-binding proteins

Fu, Xiang-Dong, Ares, Manuel·2014·Nature Reviews Genetics

Cited by (1,000)

Items 101–200 of 1,000

  1. Systematic profiling of alternative splicing signature reveals prognostic predictor for ovarian cancer
    Junyong Zhu, Zuhua Chen, Yong Hong Lei · 2017 · Gynecologic Oncology
  2. Alternative Splicing in Angiogenesis
    Elizabeth Bowler, Sebastian Oltean · 2019 · International Journal of Molecular Sciences
  3. Rare deleterious mutations of HNRNP genes result in shared neurodevelopmental disorders
    Madelyn A. Gillentine, Tianyun Wang, Kendra Hoekzema, Jill Anne Rosenfeld, Pengfei Liu, Hui Guo, Chang N. Kim, Bert B A De Vries, Lisenka E.L.M. Vissers, Magnus Nordenskjöld et al. · 2021 · Genome Medicine
  4. Regulation of alternative mRNA splicing: old players and new perspectives
    Heidi Dvinge · 2018 · FEBS Letters
  5. Alternative Splicing: A New Cause and Potential Therapeutic Target in Autoimmune Disease
    Pingping Ren, Luying Lu, Shasha Cai, Jianghua Chen, Weiqiang Lin, Fei Han · 2021 · Frontiers in Immunology
  6. Splicing Activation by Rbfox Requires Self-Aggregation through Its Tyrosine-Rich Domain
    Ying Yi, Xiaojun Wang, Celine K. Vuong, Chia-Ho Lin, Andrey Damianov, Douglas L. Black · 2017 · Cell
  7. Loss of TDP43 inhibits progression of triple-negative breast cancer in coordination with SRSF3
    Ke Hao, Limin Zhao, Honglei Zhang, Feng Xu, Haibo Xu, Junjun Hao, Shaowei Wang, Qin Yang, Li Zou, Xiaosan Su et al. · 2018 · Proceedings of the National Academy of Sciences
  8. rMAPS: RNA map analysis and plotting server for alternative exon regulation
    Juw Won Park, Sungbo Jung, Eric Christian Rouchka, Yu‐Ting Tseng, Yi Xing · 2016 · Nucleic Acids Research
  9. ESRP2 controls an adult splicing programme in hepatocytes to support postnatal liver maturation
    Bhate, Amruta, Parker, Darren J., Bebee, Thomas W., Ahn, Jaegyoon, Arif, Waqar, Rashan, Edrees H., Chorghade, Sandip, Chau, Anthony, Lee, Jae-Hyung, Anakk, Sayeepriyadarshini et al. · 2015 · Nature Communications
  10. High-Resolution RNA Maps Suggest Common Principles of Splicing and Polyadenylation Regulation by TDP-43
    Gregor Rot, Zhen Wang, Ina Huppertz, Miha Modic, Tina Lenče, Martina Hallegger, Nejc Haberman, Tomaž Curk, Christian von Mering, Jernej Ule · 2017 · Cell Reports
  11. Transcriptome-wide splicing network reveals specialized regulatory functions of the core spliceosome
    Malgorzata Ewa Rogalska, Estefanía Mancini, Sophie Bonnal, André Gohr, Bryan M. Dunyak, Niccolò Arecco, Peter G. Smith, Frédéric H. Vaillancourt, Juan Valcárcel · 2024 · Science
  12. A dynamic intron retention program in the mammalian megakaryocyte and erythrocyte lineages
    Christopher R. Edwards, William Ritchie, Justin J. -L. Wong, Ulf Schmitz, Robert M. Middleton, Xiuli An, Narla Mohandas, John E.J. Rasko, Gerd A. Blobel · 2016 · Blood
  13. Evidence that C9ORF72 Dipeptide Repeat Proteins Associate with U2 snRNP to Cause Mis-splicing in ALS/FTD Patients
    Shanye Yin, Rodrigo Lopez-Gonzalez, Ryan C. Kunz, Jaya Pal Gangopadhyay, Carl Borufka, Steven P. Gygi, Fen‐Biao Gao, Robin Reed · 2017 · Cell Reports
  14. Alternative splicing in cancers: From aberrant regulation to new therapeutics
    Xiaowei Song, Zhenyu Zeng, Huanhuan Y. Wei, Zefeng Wang · 2017 · Seminars in Cell and Developmental Biology
  15. Perfect timing: splicing and transcription rates in living cells
    Alpert, Tara, Herzel, Lydia, Neugebauer, Karla M. · 2017 · WIREs RNA
  16. Splicing at the phase-separated nuclear speckle interface: a model
    Susan E. Liao, Oded Regev · 2020 · Nucleic Acids Research
  17. Interpretation of mRNA splicing mutations in genetic disease: review of the literature and guidelines for information-theoretical analysis
    Natasha Caminsky, Eliseos J. Mucaki, Peter K. Rogan · 2014 · F1000Research
  18. Second-Generation HSP90 Inhibitor Onalespib Blocks mRNA Splicing of Androgen Receptor Variant 7 in Prostate Cancer Cells
    Roberta Ferraldeschi, Jonathan C. Welti, Marissa V. Powers, Wei Yuan, Tomoko Smyth, George Seed, Ruth Riisnaes, Somaieh Hedayat, Hannah Wang, Mateus Crespo et al. · 2016 · Cancer Research
  19. Emerging roles of histone modifications and HDACs in RNA splicing
    Raneen Rahhal, Edward Seto · 2019 · Nucleic Acids Research
  20. Alternative splicing in EMT and TGF-β signaling during cancer progression
    Ying E. Zhang, Christina H. Stuelten · 2024 · Seminars in Cancer Biology
  21. Frameshift indels introduced by genome editing can lead to in-frame exon skipping
    Simon Lalonde, Oliver Andrew Stone, Samuel Lessard, Adam Lavertu, Jessica Desjardins, Mélissa Beaudoin, Manuel A. Rivas, Didier Y. R. Stainier, Guillaume Lettre · 2017 · PLoS ONE
  22. Most human introns are recognized via multiple and tissue-specific branchpoints
    Jose Mario Bello Pineda, Robert K. Bradley · 2018 · Genes & Development
  23. Enhanced integrated gradients: improving interpretability of deep learning models using splicing codes as a case study
    Jha, Anupama, K. Aicher, Joseph, R. Gazzara, Matthew, Singh, Deependra, Barash, Yoseph · 2020 · Genome Biology
  24. RNA Binding Proteins RZ-1B and RZ-1C Play Critical Roles in Regulating Pre-mRNA Splicing and Gene Expression during Development in Arabidopsis
    Zhe Wu, Danling Zhu, Xiaoya Lin, Jin Miao, Lianfeng Gu, Xian Mo Deng, Qian Yang, Kangtai Sun, Danmeng Zhu, Xiaofeng Cao et al. · 2015 · The Plant Cell
  25. Repression of the Central Splicing Regulator RBFox2 Is Functionally Linked to Pressure Overload-Induced Heart Failure
    Chaoliang Wei, Jinsong Qiu, Yu Zhou, Yuanchao Xue, Jing Hu, Kunfu Ouyang, Indroneal Banerjee, Caimei Zhang, Biyi Chen, Hairi Li et al. · 2015 · Cell Reports
  26. Regulation of constitutive and alternative mRNA splicing across the human transcriptome by PRPF8 is determined by 5′ splice site strength
    Wickramasinghe, Vihandha O., Gonzàlez-Porta, Mar, Perera, David, Bartolozzi, Arthur R., Sibley, Christopher R., Hallegger, Martina, Ule, Jernej, Marioni, John C., Venkitaraman, Ashok R. · 2015 · Genome Biology
  27. Genome-Wide Identification of Fas/CD95 Alternative Splicing Regulators Reveals Links with Iron Homeostasis
    Juan Ramón Tejedor, Panagiotis Papasaikas, Juan Valcárcel · 2014 · Molecular Cell
  28. Diversification of the muscle proteome through alternative splicing
    Kiran Kumar Nakka, Claudia Ghigna, Davide Gabellini, Francis Jeffrey Dilworth · 2018 · Skeletal Muscle
  29. Discovery of Protein–lncRNA Interactions by Integrating Large-Scale CLIP-Seq and RNA-Seq Datasets
    Junhao Li, Shun Liu, Ling‐Ling Zheng, Jie Wu, Wenju Sun, Zelin Wang, Hui Zhou, Liang‐Hu Qu, Jianhua Yang · 2015 · Frontiers in Bioengineering and Biotechnology
  30. PHF5A Epigenetically Inhibits Apoptosis to Promote Breast Cancer Progression
    Yi-Zi Zheng, Mengzhu Xue, Hong-Jie Shen, Xiao-Guang Li, Ding Ma, Yue Gong, Yi‐Rong Liu, Feng Qiao, Hong-Yan Xie, Bi Lian et al. · 2018 · Cancer Research
  31. SpliceVault predicts the precise nature of variant-associated mis-splicing
    Ruebena Dawes, Adam Bournazos, Samantha J. Bryen, Shobhana Bommireddipalli, Rhett G. Marchant, Himanshu Joshi, Sandra T. Cooper · 2023 · Nature Genetics
  32. Alternative splicing and cancer: insights, opportunities, and challenges from an expanding view of the transcriptome
    Sara R. Cherry, Kristen W. Lynch · 2020 · Genes & Development
  33. OncoSplicing: an updated database for clinically relevant alternative splicing in 33 human cancers
    Yangjun Zhang, Xiangyang Yao, Hui Zhou, Xiaoliang Wu, Jianbo Tian, Jin Zeng, Libin Yan, Chen Duan, Haoran Liu, Heng Li et al. · 2021 · Nucleic Acids Research
  34. Heterozygous HNRNPU variants cause early onset epilepsy and severe intellectual disability
    Nuria C. Bramswig, Hermann‐Josef Lüdecke, Fadi F. Hamdan, Janine Altmüller, Filippo Beleggia, Nursel H Elcioglu, Catharine Freyer, Erica H. Gerkes, Yasemin Kendir Demirkol, Kelly G. Knupp et al. · 2017 · Human Genetics
  35. Alternative splicing rewires Hippo signaling pathway in hepatocytes to promote liver regeneration
    Bangru, Sushant, Arif, Waqar, Seimetz, Joseph, Bhate, Amruta, Chen, Jackie, Rashan, Edrees H., Carstens, Russ P., Anakk, Sayeepriyadarshini, Kalsotra, Auinash · 2018 · Nature Structural & Molecular Biology
  36. PTB/nPTB: master regulators of neuronal fate in mammals
    Jing Hu, Hao Qian, Yuanchao Xue, Xiang‐Dong Fu · 2018 · Biophysics Reports
  37. Mutations in spliceosome genes and therapeutic opportunities in myeloid malignancies
    Justin Taylor, Stanley Chun-Wei Lee · 2019 · Genes Chromosomes and Cancer
  38. The Function of Pre-mRNA Alternative Splicing in Mammal Spermatogenesis
    Huibin Song, Ling Wang, Dake Chen, Fenge Li · 2019 · International Journal of Biological Sciences
  39. Splicing-associated chromatin signatures: a combinatorial and position-dependent role for histone marks in splicing definition
    Eneritz Agirre, Andrew Oldfield, Nicolás Bellora, Alexandre Segelle, Reini F. Luco · 2021 · Nature Communications
  40. Co-regulatory activity of hnRNP K and NS1-BP in influenza and human mRNA splicing
    Matthew G. Thompson, Raquel Muñoz-Moreno, Prasanna Bhat, Renat Roytenberg, John Lindberg, Matthew R. Gazzara, Michael J. Mallory, Ke Zhang, Adolfo García‐Sastre, Beatriz M. A. Fontoura et al. · 2018 · Nature Communications
  41. Beyond Transcription: Roles of Transcription Factors in Pre-mRNA Splicing
    Xavier Rambout, Franck Dequiedt, Lynne E. Maquat · 2017 · Chemical Reviews
  42. The role of alternative splicing in cancer
    Babita Singh, Eduardo Eyras · 2016 · Transcription
  43. PTEN arginine methylation by PRMT6 suppresses PI3K–AKT signaling and modulates pre-mRNA splicing
    Jiawen Feng, Yaping Dang, Weiqi Zhang, Xuyang Zhao, Cong Zhang, Zhiyuan Hou, Yan Jin, Michael A. McNutt, Andrew R. Marks, Yuxin Yin · 2019 · Proceedings of the National Academy of Sciences
  44. Pharmacology of Modulators of Alternative Splicing
    David O. Bates, Jonathan C. Morris, Sebastian Oltean, Lucy Frances Donaldson · 2016 · Pharmacological Reviews
  45. RCK: accurate and efficient inference of sequence- and structure-based protein–RNA binding models from RNAcompete data
    Yaron Orenstein, Yuhao Wang, Bonnie Berger · 2016 · Bioinformatics
  46. In vitro iCLIP-based modeling uncovers how the splicing factor U2AF2 relies on regulation by cofactors
    F.X. Reymond Sutandy, Stefanie Ebersberger, Lu Huang, Anke Busch, Maximilian Bach, Hyun-Seo Kang, Jörg Fallmann, Daniel Maticzka, Rolf Backofen, Peter Florian Stadler et al. · 2018 · Genome Research
  47. miRNA-Mediated KHSRP Silencing Rewires Distinct Post-transcriptional Programs during TGF-β-Induced Epithelial-to-Mesenchymal Transition
    Margherita Puppo, Gabriele Bucci, Martina Sofia Rossi, Matteo Giovarelli, Domenico Bordo, Arfa Moshiri, Franco Gorlero, Roberto Gherzi, Paola Briata · 2016 · Cell Reports
  48. BCAS2 is involved in alternative mRNA splicing in spermatogonia and the transition to meiosis
    Wenbo Liu, Fengchao Wang, Qianhua Xu, Junchao Shi, Xiaoxin Zhang, Xukun Lu, Zhen‐Ao Zhao, Zheng Gao, Huaixiao Ma, Enkui Duan et al. · 2017 · Nature Communications
  49. Splicing heterogeneity: separating signal from noise
    Yihan Wan, Daniel R. Larson · 2018 · Genome biology
  50. Combinatorial Control of mRNA Fates by RNA-Binding Proteins and Non-Coding RNAs
    Valentina Iadevaia, André P. Gerber · 2015 · Biomolecules
  51. Splicing of long non-coding RNAs primarily depends on polypyrimidine tract and 5′ splice-site sequences due to weak interactions with SR proteins
    Zuzana Krchňáková, Prasoon Kumar Thakur, Michaela Krausová, Nicole I. Bieberstein, Nejc Haberman, Michaela Müller-McNicoll, David Staněk · 2018 · Nucleic Acids Research
  52. Dynamics of RNA localization to nuclear speckles are connected to splicing efficiency
    Jinjun Wu, Yu Xiao, Yunzheng Liu, Li Wen, Chuanyang Jin, Shun Liu, Sneha Paul, Chuan He, Oded Regev, Jingyi Fei · 2024 · Science Advances
  53. Ptbp2 Controls an Alternative Splicing Network Required for Cell Communication during Spermatogenesis
    Molly M. Hannigan, Leah L. Zagore, Donny D. Licatalosi · 2017 · Cell Reports
  54. Cold-Dependent Expression and Alternative Splicing of Arabidopsis Long Non-coding RNAs
    Cristiane P. G. Calixto, Nikoleta A. Τzioutziou, Allan B. James, Csaba Hornyik, Wenbin Guo, Runxuan Zhang, Hugh G. Nimmo, John W. S. Brown · 2019 · Frontiers in Plant Science
  55. Global donor and acceptor splicing site kinetics in human cells
    Leonhard Wachutka, Livia Caizzi, Julien Gagneur, Patrick Cramer · 2019 · eLife
  56. Behind the scenes of HIV-1 replication: Alternative splicing as the dependency factor on the quiet
    Helene Sertznig, Frank Hillebrand, Steffen Erkelenz, Heiner Schaal, Marek Widera · 2018 · Virology
  57. Nuclear Aurora kinase A switches m6A reader YTHDC1 to enhance an oncogenic RNA splicing of tumor suppressor RBM4
    Sisi Li, Yangfan Qi, Jiachuan Yu, YuChao Hao, Bin He, MengJuan Zhang, Zhenwei Dai, Tonghui Jiang, Suyi Li, Fang Huang et al. · 2022 · Signal Transduction and Targeted Therapy
  58. PSF : nuclear busy‐body or nuclear facilitator?
    Christopher A. Yarosh, Joseph R. Iacona, Carol S. Lutz, Kristen W. Lynch · 2015 · Wiley Interdisciplinary Reviews - RNA
  59. Regulated Intron Retention and Nuclear Pre-mRNA Decay Contribute to PABPN1 Autoregulation
    Danny Bergeron, Gheorghe Pal, Yves B. Beaulieu, Benoı̂t Chabot, François Bachand · 2015 · Molecular and Cellular Biology
  60. A large‐scale analysis of alternative splicing reveals a key role of QKI in lung cancer
    Fernando J. de Miguel, Maria Jose Pajares, Elena Martínez‐Terroba, Daniel Ajona, Xabier Morales, Ravi Datta Sharma, Francisco J. Pardo, Ana Rouzaut, Ángel Rubio, Luis M. Montuenga et al. · 2016 · Molecular Oncology
  61. SPSB1-mediated HnRNP A1 ubiquitylation regulates alternative splicing and cell migration in EGF signaling
    Feng Wang, Xing Fu, Peng Chen, Ping Wu, Xiaojuan Fan, Na Li, Hong Mei Zhu, Ting-Ting Jia, Hongbin Ji, Zefeng Wang et al. · 2017 · Cell Research
  62. Alternative splicing of hepatitis B virus: A novel virus/host interaction altering liver immunity
    Marion Duriez, Yassmina Mandouri, Bouchra Lekbaby, Hualin Wang, Aurélie Schnuriger, François Redelsperger, Ida Chiara Guerrera, Marine Lefèvre, Véronique Fauveau, James Ahodantin et al. · 2017 · Journal of Hepatology
  63. Decoding a cancer-relevant splicing decision in the RON proto-oncogene using high-throughput mutagenesis
    Simon Braun, Mihaela Enculescu, Samarth Thonta Setty, Mariela Cortés-López, Bernardo P. de Almeida, F.X. Reymond Sutandy, Laura Schulz, Anke Busch, Markus Seiler, Stefanie Ebersberger et al. · 2018 · Nature Communications
  64. hnRNPM guides an alternative splicing program in response to inhibition of the PI3K/AKT/mTOR pathway in Ewing sarcoma cells
    Ilaria Passacantilli, Paola Frisone, Elisa De Paola, Marco Fidaleo, Maria Paola Paronetto · 2017 · Nucleic Acids Research
  65. PTBP1 and PTBP2 Repress Nonconserved Cryptic Exons
    Jonathan P. Ling, Resham Chhabra, Jonathan Merran, Paul Schaughency, Sarah J. Wheelan, Jeffry L. Corden, Philip C. Wong · 2016 · Cell Reports
  66. An NS-segment exonic splicing enhancer regulates influenza A virus replication in mammalian cells
    Xiaofeng Huang, Min Zheng, Pui Wang, Bobo Wing-Yee Mok, Siwen Liu, Siu-Ying Lau, Chen Pin, Yen‐Chin Liu, Honglian Liu, Yixin Chen et al. · 2017 · Nature Communications
  67. Transcriptomic signature associated with carcinogenesis and aggressiveness of papillary thyroid carcinoma
    Huajing Teng, Fengbiao Mao, Jialong Liang, Meiying Xue, Wenqing Wei, Xianfeng Li, Kun Zhang, Dongdong Feng, Baoguo Liu, Zhong Sheng Sun · 2018 · Theranostics
  68. Global identification of hnRNP A1 binding sites for SSO-based splicing modulation
    Gitte Hoffmann Bruun, Thomas Koed Doktor, Jonas Borch-Jensen, Akio Masuda, Adrian R. Krainer, Kinji Ohno, Brage Storstein Andresen · 2016 · BMC Biology
  69. Sequencing Overview of Ewing Sarcoma: A Journey across Genomic, Epigenomic and Transcriptomic Landscapes
    Laurens G.L. Sand, Károly Szuhai, Pancras C.W. Hogendoorn · 2015 · International Journal of Molecular Sciences
  70. Jmjd6, a JmjC Dioxygenase with Many Interaction Partners and Pleiotropic Functions
    Janice Kwok, Marie F. O’Shea, David Arthur Hume, Andreas Lengeling · 2017 · Frontiers in Genetics
  71. SPF45-related splicing factor for phytochrome signaling promotes photomorphogenesis by regulating pre-mRNA splicing in Arabidopsis
    Ruijiao Xin, Ling Q. Zhu, Patrice A. Salomé, Estefanía Mancini, Carine M. Marshall, Frank G. Harmon, Marcelo Javier Yanovsky, Detlef Weigel, Enamul Huq · 2017 · Proceedings of the National Academy of Sciences
  72. Astrocyte senescence may drive alterations in GFAPα, CDKN2A p14ARF, and TAU3 transcript expression and contribute to cognitive decline
    Jed J. Lye, Eva Latorre, Benjamin P. Lee, Stefania Bandinelli, Janet E. Holley, Nicholas J. Gutowski, Luigi Ferrucci, Lorna W. Harries · 2019 · GeroScience
  73. Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5
    Yeon J. Lee, Qingqing Wang, Donald C. Rio · 2018 · Genes & Development
  74. Insecticide resistance mediated by an exon skipping event
    Madeleine Berger, Alin Mirel Puinean, Emma L. Randall, Christoph T. Zimmer, Wellington Marcos da Silva, Pablo Bielza, L. M. Field, David Hughes, Ian R. Mellor, Keywan Hassani‐Pak et al. · 2016 · Molecular Ecology
  75. Transcriptome analyses reveal SR45 to be a neutral splicing regulator and a suppressor of innate immunity in Arabidopsis thaliana
    Xiao‐Ning Zhang, Yifei Shi, Jordan J. Powers, Nikhil B. Gowda, Chong Zhang, Heba M. M. Ibrahim, Hannah B. Ball, Samuel L. Chen, Hua Lu, Stephen M. Mount · 2017 · BMC Genomics
  76. Splicing and cancer: Challenges and opportunities
    Patrícia P. Coltri, Maria Gabriela Pereira dos Santos, Gleyce Kelly Silva · 2019 · Wiley Interdisciplinary Reviews - RNA
  77. JUM is a computational method for comprehensive annotation-free analysis of alternative pre-mRNA splicing patterns
    Qingqing Wang, Donald C. Rio · 2018 · Proceedings of the National Academy of Sciences
  78. Viral-induced alternative splicing of host genes promotes influenza replication
    Matthew G. Thompson, Mark Dittmar, Michael J. Mallory, Prasanna Bhat, Max Ferretti, Beatriz M. A. Fontoura, Sara R. Cherry, Kristen W. Lynch · 2020 · eLife
  79. The pan-cancer lncRNA PLANE regulates an alternative splicing program to promote cancer pathogenesis
    Teng Liu, Yuchen Feng, Su Guo, Pei Lin Wang, Teng Fei Qi, Yi Meng Yue, Shi Xing Wang, Sheng Nan Zhang, Cai Xia Tang, Ting La et al. · 2021 · Nature Communications
  80. Comprehensive characterisation of intronic mis-splicing mutations in human cancers
    Hyunchul Jung, Kang Seon Lee, Jung Kyoon Choi · 2021 · Oncogene
  81. Induced transcription and stability of CELF2 mRNA drives widespread alternative splicing during T-cell signaling
    Michael J. Mallory, Samuel J. Allon, Jinsong Qiu, Matthew R. Gazzara, Iulia Tapescu, Nicole M. Martínez, Xiang‐Dong Fu, Kristen W. Lynch · 2015 · Proceedings of the National Academy of Sciences
  82. RBM17 Interacts with U2SURP and CHERP to Regulate Expression and Splicing of RNA-Processing Proteins
    Antonia De Maio, Hari Krishna Yalamanchili, Carolyn J. Adamski, Vincenzo Alessandro Gennarino, Zhandong Liu, Jun Qin, Sung Yun Jung, Ronald Richman, Harry T. Orr, Huda Yahya Zoghbi · 2018 · Cell Reports
  83. Pan-cancer analysis of clinical relevance of alternative splicing events in 31 human cancers
    Yangjun Zhang, Libin Yan, Jin Zeng, Hui Zhou, Haoran Liu, Yu Gan, Weimin Yao, Ke Chen, Zhangqun Ye, Hua Xu · 2019 · Oncogene
  84. SRPK1 acetylation modulates alternative splicing to regulate cisplatin resistance in breast cancer cells
    Cheng Wang, Zhihong Zhou, Charannya Sozheesvari Subhramanyam, Qiong Cao, Zealyn Shi‐Lin Heng, Wen Liu, Xiang‐Dong Fu, Qidong Hu · 2020 · Communications Biology
  85. A Comprehensive Analysis of Alternative Splicing in Paleopolyploid Maize
    Wenbin Mei, Sanzhen Liu, James C. Schnable, Cheng‐Ting Yeh, Nathan M. Springer, Patrick S. Schnable, W. Brad Barbazuk · 2017 · Frontiers in Plant Science
  86. RNA Binding Protein Ptbp2 Is Essential for Male Germ Cell Development
    Leah L. Zagore, Sarah E. Grabinski, Thomas J. Sweet, Molly M. Hannigan, R. Michael Sramkoski, Qin Li, Donny D. Licatalosi · 2015 · Molecular and Cellular Biology
  87. Combinatorial regulation of alternative splicing
    Hossein Shenasa, Klemens J. Hertel · 2019 · Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms
  88. Widespread JNK-dependent alternative splicing induces a positive feedback loop through CELF2-mediated regulation of MKK7 during T-cell activation
    Nicole M. Martínez, Laura M. Agosto, Jinsong Qiu, Michael J. Mallory, Matthew R. Gazzara, Yoseph Barash, Xiang‐Dong Fu, Kristen W. Lynch · 2015 · Genes & Development
  89. Uncovering the impacts of alternative splicing on the proteome with current omics techniques
    Marina Reixachs‐Solé, Eduardo Eyras · 2022 · Wiley Interdisciplinary Reviews - RNA
  90. RBM25 is a global splicing factor promoting inclusion of alternatively spliced exons and is itself regulated by lysine mono-methylation
    Scott M. Carlson, Cameron M. Soulette, Ze Yang, Joshua Eric Elias, Angela Norie Brooks, Or Gozani · 2017 · Journal of Biological Chemistry
  91. Potential link between m 6 A modification and systemic lupus erythematosus
    Lian‐Ju Li, Yin‐Guang Fan, Rui‐Xue Leng, Hai‐Feng Pan, Dong‐Qing Ye · 2017 · Molecular Immunology
  92. Saturation mutagenesis reveals manifold determinants of exon definition
    Shengdong Ke, Vincent Anquetil, Jorge Rojas Zamalloa, Alisha Maity, Anthony Yang, Mauricio A. Arias, Sergey M. Kalachikov, James J. Russo, Jingyue Ju, Lawrence A. Chasin · 2017 · Genome Research
  93. Sam68 promotes self-renewal and glycolytic metabolism in mouse neural progenitor cells by modulating Aldh1a3 pre-mRNA 3'-end processing
    Piergiorgio La Rosa, Pamela Bielli, Claudia Compagnucci, Eleonora Cesari, Elisabetta Volpe, Stefano Farioli Vecchioli, Claudio Sette · 2016 · eLife
  94. How Are Short Exons Flanked by Long Introns Defined and Committed to Splicing?
    Dror Hollander, Shiran Naftelberg, Galit Lev-Maor, Alberto R. Kornblihtt, Gil Ast · 2016 · Trends in Genetics
  95. Histone lysine demethylase KDM4B regulates the alternative splicing of the androgen receptor in response to androgen deprivation
    Lingling Duan, Zhenhua Chen, Jun Kun Lu, Yanping Liang, Ming Wang, Carlos M. Roggero, Qing-Jun Zhang, Jason Gao, Yong Fang, Jiazheng Cao et al. · 2019 · Nucleic Acids Research
  96. Splicing regulation in brain and testis: common themes for highly specialized organs
    Chiara Naro, Eleonora Cesari, Claudio Sette · 2021 · Cell Cycle
  97. The alternative splicing program of differentiated smooth muscle cells involves concerted non-productive splicing of post-transcriptional regulators
    Miriam Llorian, Clare Gooding, Nicolás Bellora, Martina Hallegger, Adrian Buckroyd, Xiao Wang, Dipen Rajgor, Melis Kayikci, Jack Feltham, Jernej Ule et al. · 2016 · Nucleic Acids Research
  98. The RNA-binding protein Sam68 regulates expression and transcription function of the androgen receptor splice variant AR-V7
    Jacqueline Stockley, Elke Katrin Markert, Yan Zhou, Craig N. Robson, David J. Elliott, Johan Lindberg, Hing Y. Leung, Prabhakar Rajan · 2015 · Scientific Reports
  99. Integrated structural biology to unravel molecular mechanisms of protein-RNA recognition
    Andreas Schlundt, Jan‐Niklas Tants, Michael Sattler · 2017 · Methods
  100. A novel L1CAM isoform with angiogenic activity generated by NOVA2-mediated alternative splicing
    Francesca Angiolini, Elisa Belloni, Marco Giordano, Matteo Campioni, Federico Forneris, Maria Paola Paronetto, Michela Lupia, Chiara Brandas, Davide Pradella, Anna Di Matteo et al. · 2019 · eLife