The DOI matches its Crossref record; 99 of the 99 references it cites were found in a registry or an index.
Genomic islands in pathogenic and environmental microorganisms
Overview
Integrity signals
Registry
Cites
Statistics
Verification
Claims the paper makes
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
In the citing paper
“Population heterogeneity is thought to be linked with resilience against environmental uncertainty [25], and mobile genetic elements are the primary sources of heterogeneity [26].”
From Microbiota of Cheese Ecosystems: A Perspective on Cheesemaking (2025) · cites this paper as [26]
Citations
Cites
Escherichia Coli and Salmonella: Typhimurium Cellular and Molecular Biology
Neidhardt, F. C., Ingraham, J. L., Low, K. B., Magasanik, B., Schaechter, M., & Umbarger, H. E. (1987) · Cited by 4,097
Escherichia Coli and Salmonella: Typhimurium Cellular and Molecular Biology
Neidhardt, F. C., & Ingraham, J. L. (1987) · Medical Entomology and Zoology · Cited by 4,089
Escherichia coli and Salmonella typhimurium: Cellular and molecular biology
Lejeune, P. (1988) · Biochimie · doi:10.1016/0300-9084(88)90119-8 · Cited by 4,086
Lateral gene transfer and the nature of bacterial innovation
Ochman, H., Lawrence, J. G., & Groisman, E. A. (2000) · Nature · doi:10.1038/35012500 · Cited by 3,816
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)
Bentley, S. D., Chater, K. F., Cerdeño-Tárraga, A. M., Challis, G. L., Thomson, N. R., James, K., Harris, D. E., Quail, M. A., Kieser, H. M., Harper, D., et al. (2002) · Nature · doi:10.1038/417141a · Cited by 3,226
Type III Protein Secretion Systems in Bacterial Pathogens of Animals and Plants
Hueck, C. J. (1998) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.62.2.379-433.1998 · Cited by 2,420
Genome sequence of enterohaemorrhagic Escherichia coli O157:H7
Perna, N. T., Plunkett, G., Burland, V., Mau, B., Glasner, J. D., Rose, D. J., Mayhew, G. F., Evans, P. S., Gregor, J., Kirkpatrick, H. A., et al. (2001) · Nature · doi:10.1038/35054089 · Cited by 2,035
Whole genome sequencing of meticillin-resistant Staphylococcus aureus
Kuroda, M., Ohta, T., Uchiyama, I., Baba, T., Yuzawa, H., Kobayashi, I., Cui, L., Oguchi, A., Aoki, K.-I., Nagai, Y., et al. (2001) · The Lancet · doi:10.1016/s0140-6736(00)04403-2 · Cited by 1,950
DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
Heidelberg, J. F., Eisen, J. A., Nelson, W. C., Clayton, R. A., Gwinn, M. L., Dodson, R. J., Haft, D. H., Hickey, E. K., Peterson, J. D., Umayam, L. A., et al. (2000) · Nature · doi:10.1038/35020000 · Cited by 1,871
Welch, R. A., Burland, V., Plunkett, G., Redford, P., Roesch, P. L., Rasko, D. A., Buckles, E. L., Liou, S., Boutin, A., Hackett, J. D., et al. (2002) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.252529799 · Cited by 1,523
Flagged first, then by citations
Cited by
Sorted by citations
Rizzo, L., Manaia, C., Merlin, C., Schwartz, T., Dagot, C., Ploy, M. C., Michael, I., & Fatta-Kassinos, D. (2013) · Science of The Total Environment · doi:10.1016/j.scitotenv.2013.01.032 · Cited by 2,493
Antimicrobial Resistance in ESKAPE Pathogens
Oliveira, D. M. P. D., Forde, B. M., Kidd, T. J., Harris, P. N. A., Schembri, M. A., Beatson, S. A., Paterson, D. L., & Walker, M. J. (2020) · Clinical Microbiology Reviews · doi:10.1128/cmr.00181-19 · Cited by 2,243
Carbon catabolite repression in bacteria: many ways to make the most out of nutrients
Görke, B., & Stülke, J. (2008) · Nature Reviews Microbiology · doi:10.1038/nrmicro1932 · Cited by 1,701
IslandViewer 4: expanded prediction of genomic islands for larger-scale datasets
Bertelli, C., Laird, M. R., Williams, K. P., Lau, B. Y., Hoad, G. R., Winsor, G. L., & Brinkman, F. S. L. (2017) · Nucleic Acids Research · doi:10.1093/nar/gkx343 · Cited by 1,535
Medini, D., Donati, C., Tettelin, H., Masignani, V., & Rappuoli, R. (2005) · Current Opinion in Genetics & Development · doi:10.1016/j.gde.2005.09.006 · Cited by 1,307
Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths
Touchon, M., Hoede, C., Tenaillon, O., Barbe, V., Baeriswyl, S., Bidet, P., Bingen, É., Bonacorsi, S., Bouchier, C., Bouvet, O. M. M., et al. (2009) · PLoS Genetics · doi:10.1371/journal.pgen.1000344 · Cited by 1,248
Horizontal gene transfer, genome innovation and evolution
Gogarten, J. P., & Townsend, J. P. (2005) · Nature Reviews Microbiology · doi:10.1038/nrmicro1204 · Cited by 1,035
Genomic islands: tools of bacterial horizontal gene transfer and evolution
Juhas, M., van der Meer, J. R., Gaillard, M., Harding, R. M., Hood, D. W., & Crook, D. W. (2009) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.2008.00136.x · Cited by 1,027
Comparative Genomics of Multidrug Resistance in Acinetobacter baumannii
Fournier, P., Vallenet, D., Barbe, V., Audic, S., Ogata, H., Poirel, L., Richet, H., Robert, C., Mangenot, S., Abergel, C., et al. (2006) · PLoS Genetics · doi:10.1371/journal.pgen.0020007 · Cited by 809
Cyanobacterial peptides — Nature's own combinatorial biosynthesis
Welker, M., & von Döhren, H. (2006) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.2006.00022.x · Cited by 803
The rhizosphere as a reservoir for opportunistic human pathogenic bacteria
Berg, G., Eberl, L., & Hartmann, A. (2005) · Environmental Microbiology · doi:10.1111/j.1462-2920.2005.00891.x · Cited by 716
Bacterial insertion sequences: their genomic impact and diversity
Siguier, P., Gourbeyre, E., & Chandler, M. (2014) · FEMS Microbiology Reviews · doi:10.1111/1574-6976.12067 · Cited by 773
The population genetics of pathogenic Escherichia coli
Denamur, É., Clermont, O., Bonacorsi, S., & Gordon, D. M. (2020) · Nature Reviews Microbiology · doi:10.1038/s41579-020-0416-x · Cited by 731
Genomic insights into the marine sponge microbiome
Hentschel, U., Piel, J., Degnan, S. M., & Taylor, M. W. (2012) · Nature Reviews Microbiology · doi:10.1038/nrmicro2839 · Cited by 659
Self-citationSurvival of Escherichia coli in the environment: fundamental and public health aspects
van Elsas, J. D., Semenov, A. V., Costa, R., & Trevors, J. T. (2010) · The ISME Journal · doi:10.1038/ismej.2010.80 · Cited by 653
Genomics of secondary metabolite production by Pseudomonas spp.
Gross, H., & Loper, J. E. (2009) · Natural Product Reports · doi:10.1039/b817075b · Cited by 627
Schroeder, G. N., & Hilbi, H. (2008) · Clinical Microbiology Reviews · doi:10.1128/cmr.00032-07 · Cited by 615
Stokes, H. W., & Gillings, M. R. (2011) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.2011.00273.x · Cited by 642
Mobile genetic elements of Staphylococcus aureus
Małachowa, N., & DeLeo, F. R. (2010) · Cellular and Molecular Life Sciences · doi:10.1007/s00018-010-0389-4 · Cited by 566
Sittka, A., Lucchini, S., Papenfort, K., Sharma, C. M., Rolle, K., Binnewies, T. T., Hinton, J. C. D., & Vogel, J. (2008) · PLoS Genetics · doi:10.1371/journal.pgen.1000163 · Cited by 580
Magnetosome biogenesis in magnetotactic bacteria
Uebe, R., & Schüler, D. (2016) · Nature Reviews Microbiology · doi:10.1038/nrmicro.2016.99 · Cited by 552
Single-Cell Genomics Reveals Hundreds of Coexisting Subpopulations in Wild Prochlorococcus
Kashtan, N., Roggensack, S. E., Rodrigue, S., Berta-Thompson, J. W., Biller, S. J., Coe, A., Ding, H., Marttinen, P., Malmstrom, R. R., Stocker, R., et al. (2014) · Science · doi:10.1126/science.1248575 · Cited by 541
Conjugative plasmids: vessels of the communal gene pool
Norman, A., Hansen, L. H., & Sørensen, S. J. (2009) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2009.0037 · Cited by 519
Anaerobic Catabolism of Aromatic Compounds: a Genetic and Genomic View
Carmona, M., Zamarro, M. T., Blázquez, B., Durante‐Rodríguez, G., Juárez, J. F., Valderrama, J. A., Barragán, M. J. L., García, J. L., & Dı́az, E. (2009) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00021-08 · Cited by 475
Methicillin-Resistant Staphylococcus aureus: An Evolutionary, Epidemiologic, and Therapeutic Odyssey
Deresinski, S. C. (2005) · Clinical Infectious Diseases · doi:10.1086/427701 · Cited by 465
Ecology, Diversity, and Evolution of Magnetotactic Bacteria
Lefèvre, C., & Bazylinski, D. (2013) · Microbiology and Molecular Reviews · doi:10.1128/mmbr.00021-13 · Cited by 391
Comparative Genome Sequence Analysis of Multidrug-Resistant Acinetobacter baumannii
Adams, M. D., Goglin, K. C., Molyneaux, N., Hujer, K. M., Lavender, H. F., Jamison, J. J., MacDonald, I. J., Martin, K. M., Russo, T. A., Campagnari, A. A., et al. (2008) · Journal of Bacteriology · doi:10.1128/jb.00834-08 · Cited by 434
Evolutionary microbial genomics: insights into bacterial host adaptation
Toft, C., & Andersson, S. G. E. (2010) · Nature Reviews Genetics · doi:10.1038/nrg2798 · Cited by 424
The Bacterial Species Challenge: Making Sense of Genetic and Ecological Diversity
Fraser, C., Alm, E. J., Polz, M. F., Spratt, B. G., & Hanage, W. P. (2009) · Science · doi:10.1126/science.1159388 · Cited by 410
Darmon, E., & Leach, D. R. F. (2014) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00035-13 · Cited by 437
Anti-CRISPR: discovery, mechanism and function
Pawluk, A., Davidson, A. R., & Maxwell, K. L. (2017) · Nature Reviews Microbiology · doi:10.1038/nrmicro.2017.120 · Cited by 398
Enterotoxigenic Escherichia coli in veterinary medicine
Nagy, B., & Fekete, P. Z. (2005) · International Journal of Medical Microbiology · doi:10.1016/j.ijmm.2005.07.003 · Cited by 396
Rethinking Crop Nutrition in Times of Modern Microbiology: Innovative Biofertilizer Technologies
Mitter, E. K., Tosi, M., Obregón, D., Dunfield, K. E., & Germida, J. J. (2021) · Frontiers in Sustainable Food Systems · doi:10.3389/fsufs.2021.606815 · Cited by 404
Microcins, gene-encoded antibacterial peptides from enterobacteria
Duquesne, S., Destoumieux‐Garzón, D., Péduzzi, J., & Rebuffat, S. (2007) · Natural Product Reports · doi:10.1039/b516237h · Cited by 389
Langille, M. G. I., & Brinkman, F. S. L. (2009) · Bioinformatics · doi:10.1093/bioinformatics/btp030 · Cited by 386
The Ecology and Evolution of Pangenomes
Brockhurst, M. A., Harrison, E., Hall, J. P. J., Richards, T., McNally, A., & MacLean, C. (2019) · Current Biology · doi:10.1016/j.cub.2019.08.012 · Cited by 385
The Repertoire of ICE in Prokaryotes Underscores the Unity, Diversity, and Ubiquity of Conjugation
Guglielmini, J., Quintais, L. T., Garcillán-Barcia, M. P., de la Cruz, F., & Rocha, E. P. C. (2011) · PLoS Genetics · doi:10.1371/journal.pgen.1002222 · Cited by 402
Barbe, V., Cruveiller, S., Kunst, F., Lenoble, P., Meurice, G., Sekowska, A., Vallenet, D., Wang, T., Moszer, I., Médigue, C., et al. (2009) · Microbiology · doi:10.1099/mic.0.027839-0 · Cited by 379
Conjugative and mobilizable genomic islands in bacteria: evolution and diversity
Bellanger, X., Payot, S., Leblond‐Bourget, N., & Guédon, G. (2013) · FEMS Microbiology Reviews · doi:10.1111/1574-6976.12058 · Cited by 396
Nnadozie, C. F., & Odume, O. N. (2019) · Environmental Pollution · doi:10.1016/j.envpol.2019.113067 · Cited by 367
E. coli as an All-Rounder: The Thin Line Between Commensalism and Pathogenicity
Leimbach, A., Hacker, J. H., & Dobrindt, U. (2013) · Current topics in microbiology and immunology · doi:10.1007/82_2012_303 · Cited by 386
Self-citationYan, Y., Yang, J., Dou, Y., Chen, M., Ping, S., Peng, J., Lü, W., Zhang, W., Yao, Z., Li, H., et al. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0801093105 · Cited by 365
Evolutionary Implications of Bacterial Polyketide Synthases
Jenke‐Kodama, H., Sandmann, A., Müller, R., & Dittmann, E. (2005) · Molecular Biology and Evolution · doi:10.1093/molbev/msi193 · Cited by 362
Pseudomonas aeruginosa Genomic Structure and Diversity
Klockgether, J., Cramer, N., Wiehlmann, L., Davenport, C., & Tümmler, B. (2011) · Frontiers in Microbiology · doi:10.3389/fmicb.2011.00150 · Cited by 355
Microbes and Microbial Technology
Ahmad, I., Ahmed, F. K., & Pichtel, J. (2011) · Springer eBooks · doi:10.1007/978-1-4419-7931-5 · Cited by 360
Microbiology in the post-genomic era
Medini, D., Serruto, D., Parkhill, J., Relman, D. A., Donati, C., Moxon, R. E., Falkow, S., & Rappuoli, R. (2008) · Nature Reviews Microbiology · doi:10.1038/nrmicro1901 · Cited by 363
Surface Proteins ofStreptococcus agalactiaeand Related Proteins in Other Bacterial Pathogens
Lindahl, G., Stålhammar‐Carlemalm, M., & Areschoug, T. (2005) · Clinical Microbiology Reviews · doi:10.1128/cmr.18.1.102-127.2005 · Cited by 357
Pallen, M. J., & Wren, B. W. (2007) · Nature · doi:10.1038/nature06248 · Cited by 349
Thieme, F., Koebnik, R., Bekel, T., Berger, C., Boch, J., Büttner, D., Caldana, C., Gaigalat, L., Goesmann, A., Kay, S., et al. (2005) · Journal of Bacteriology · doi:10.1128/jb.187.21.7254-7266.2005 · Cited by 346
Brzuszkiewicz, E., Brüggemann, H., Liesegang, H., Emmerth, M., Ölschläger, T., Nagy, G., Albermann, K., Wagner, C., Buchrieser, C., Emödy, L., et al. (2006) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0603038103 · Cited by 346
Self-citationEscherichia coli : an old friend with new tidings
Vilà, J., Sáez-López, E., Johnson, J. R., Römling, U., Dobrindt, U., Cantón, R., Giske, C. G., Naas, T., Carattoli, A., Martínez-Medina, M., et al. (2016) · FEMS Microbiology Reviews · doi:10.1093/femsre/fuw005 · Cited by 362
Self-citationThe Accessory Genome of Pseudomonas aeruginosa
Kung, V. L., Ozer, E. A., & Hauser, A. R. (2010) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00027-10 · Cited by 340
Vercoe, R. B., Chang, J. T., Dy, R. L. V., Taylor, C., Gristwood, T., Clulow, J. S., Richter, C., Przybilski, R., Pitman, A. R., & Fineran, P. C. (2013) · PLoS Genetics · doi:10.1371/journal.pgen.1003454 · Cited by 343
Linking the emergence of fungal plant diseases with ecological speciation
Giraud, T., Gladieux, P., & Gavrilets, S. (2010) · Trends in Ecology & Evolution · doi:10.1016/j.tree.2010.03.006 · Cited by 323
Evolution in Health and Disease
(2007) · doi:10.1093/acprof:oso/9780199207466.001.0001 · Cited by 323
Putze, J., Hennequin, C., Nougayrède, J., Zhang, W., Homburg, S., Karch, H., Bringer, M.-A., Fayolle, C., Carniel, É., Rabsch, W., et al. (2009) · Infection and Immunity · doi:10.1128/iai.00522-09 · Cited by 319
Self-citationNanda, A. M., Thormann, K. M., & Frunzke, J. (2014) · Journal of Bacteriology · doi:10.1128/jb.02230-14 · Cited by 319
What Makes a Bacterial Species Pathogenic?:Comparative Genomic Analysis of the Genus Leptospira
Fouts, D. E., Matthias, M. A., Adhikarla, H., Adler, B., Santos, L. A., Berg, D. E., Bulach, D., Buschiazzo, A., Chang, Y.-F., Galloway, R. L., et al. (2016) · PLoS neglected tropical diseases · doi:10.1371/journal.pntd.0004403 · Cited by 331
Genomic island variability facilitates Prochlorococcus–virus coexistence
Avrani, S., Wurtzel, O., Sharon, I., Sorek, R., & Lindell, D. (2011) · Nature · doi:10.1038/nature10172 · Cited by 304
Type IV secretion systems: tools of bacterial horizontal gene transfer and virulence
Juhas, M., Crook, D. W., & Hood, D. W. (2008) · Cellular Microbiology · doi:10.1111/j.1462-5822.2008.01187.x · Cited by 291
Streptococcus pneumoniae’s Virulence and Host Immunity: Aging, Diagnostics, and Prevention
Brooks, L. R. K., & Mias, G. I. (2018) · Frontiers in Immunology · doi:10.3389/fimmu.2018.01366 · Cited by 311
PRICE: Software for the Targeted Assembly of Components of (Meta) Genomic Sequence Data
Ruby, J. G., Bellare, P., & DeRisi, J. L. (2013) · G3 Genes Genomes Genetics · doi:10.1534/g3.113.005967 · Cited by 288
Evaluation of genomic island predictors using a comparative genomics approach
Langille, M. G. I., Hsiao, W., & Brinkman, F. S. L. (2008) · BMC Bioinformatics · doi:10.1186/1471-2105-9-329 · Cited by 282
Detecting genomic islands using bioinformatics approaches
Langille, M. G. I., Hsiao, W., & Brinkman, F. S. L. (2010) · Nature Reviews Microbiology · doi:10.1038/nrmicro2350 · Cited by 280
Diversity and evolution of secondary metabolism in the marine actinomycete genus Salinispora
Ziemert, N., Lechner, A., Wietz, M., Millán‐Aguiñaga, N., Chavarría, K. L., & Jensen, P. R. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1324161111 · Cited by 279
Chen, C., Tang, J., Dong, W., Wang, C., Feng, Y., Wang, J., Zheng, F., Pan, X., Liu, D., Li, M., et al. (2007) · PLoS ONE · doi:10.1371/journal.pone.0000315 · Cited by 271
Dhillon, B. K., Laird, M. R., Shay, J. A., Winsor, G. L., Lo, R., Nizam, F., Pereira, S. K., Waglechner, N., McArthur, A. G., Langille, M. G. I., et al. (2015) · Nucleic Acids Research · doi:10.1093/nar/gkv401 · Cited by 267
Mapping the Pathways to StaphylococcalPathogenesis by Comparative Secretomics
Sibbald, M. J. J. B., Ziebandt, A., Engelmann, S., Hecker, M., de Jong, A., Harmsen, H. J. M., Raangs, G. C., Stokroos, I., Arends, J. P., Dubois, J. Y. F., et al. (2006) · Microbiology and Molecular Biology Reviews · doi:10.1128/mmbr.00008-06 · Cited by 267
Gall, T. L., Clermont, O., Gouriou, S., Picard, B., Nassif, X., Denamur, É., & Tenaillon, O. (2007) · Molecular Biology and Evolution · doi:10.1093/molbev/msm172 · Cited by 256
Ullrich, S., Kube, M., Schübbe, S., Reinhardt, R., & Schüler, D. (2005) · Journal of Bacteriology · doi:10.1128/jb.187.21.7176-7184.2005 · Cited by 255
The role of the prostate in male fertility, health and disease
Verze, P., Cai, T., & Lorenzetti, S. (2016) · Nature Reviews Urology · doi:10.1038/nrurol.2016.89 · Cited by 255
Legume Evolution: Where Do Nodules and Mycorrhizas Fit In?
Sprent, J. I., & James, E. K. (2007) · PLANT PHYSIOLOGY · doi:10.1104/pp.107.096156 · Cited by 253
Bacteria are small but not stupid: cognition, natural genetic engineering and socio-bacteriology
Shapiro, J. A. (2007) · Studies in History and Philosophy of Science Part C Studies in History and Philosophy of Biological and Biomedical Sciences · doi:10.1016/j.shpsc.2007.09.010 · Cited by 252
ExploringLactobacillus plantarumGenome Diversity by Using Microarrays
Molenaar, D., Bringel, F., Schuren, F. H. J., de Vos, W. M., Siezen, R. J., & Kleerebezem, M. (2005) · Journal of Bacteriology · doi:10.1128/jb.187.17.6119-6127.2005 · Cited by 252
Genetics and cell biology of magnetosome formation in magnetotactic bacteria
Schüler, D. (2008) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.2008.00116.x · Cited by 247
Metal Nanoparticles in Microbiology
Rai, M., & Durán, N. (2011) · Springer eBooks · doi:10.1007/978-3-642-18312-6 · Cited by 248
Distribution and dynamics of epidemic and pandemic Vibrio parahaemolyticus virulence factors
Ceccarelli, D., Hasan, N. A., Huq, A., & Colwell, R. R. (2013) · Frontiers in Cellular and Infection Microbiology · doi:10.3389/fcimb.2013.00097 · Cited by 243
Biogeography of the Sulfolobus islandicus pan-genome
Reno, M. L., Held, N. L., Fields, C. J., Burke, P. V., & Whitaker, R. J. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0808945106 · Cited by 250
Massive comparative genomic analysis reveals convergent evolution of specialized bacteria
Merhej, V., Royer‐Carenzi, M., Pontarotti, P., & Raoult, D. (2009) · Biology Direct · doi:10.1186/1745-6150-4-13 · Cited by 233
Genomics and the bacterial species problem.
Doolittle, W. F., & Papke, R. T. (2006) · Genome biology · doi:10.1186/gb-2006-7-9-116 · Cited by 243
Bacteria in Agrobiology: Plant Growth Responses
Maheshwari, D. K. (2011) · Springer eBooks · doi:10.1007/978-3-642-20332-9 · Cited by 229
Ren, S., Boo, C., Guo, N., Wang, S., Elimelech, M., & Wang, Y. (2018) · Environmental Science & Technology · doi:10.1021/acs.est.8b01888 · Cited by 227
Seitz, P., & Blokesch, M. (2012) · FEMS Microbiology Reviews · doi:10.1111/j.1574-6976.2012.00353.x · Cited by 238
Improved genomic island predictions with IslandPath-DIMOB
Bertelli, C., & Brinkman, F. S. L. (2018) · Bioinformatics · doi:10.1093/bioinformatics/bty095 · Cited by 222
An H-NS-like Stealth Protein Aids Horizontal DNA Transmission in Bacteria
Doyle, M., Fookes, M. C., Ivens, A. C., Mangan, M. W., Wain, J. R., & Dorman, C. J. (2007) · Science · doi:10.1126/science.1137550 · Cited by 219
Multifactorial Diversity Sustains Microbial Community Stability
Erkus, O., de Jager, V. C. L., Spus, M., van Alen-Boerrigter, I. J., van Rijswijck, I. M. H., Hazelwood, L., Janssen, P. W. M., van Hijum, S. A. F. T., Kleerebezem, M., & Smid, E. J. (2013) · The ISME Journal · doi:10.1038/ismej.2013.108 · Cited by 217
Genomics, Genetics, and Cell Biology of Magnetosome Formation
Jogler, C., & Schüler, D. (2009) · Annual Review of Microbiology · doi:10.1146/annurev.micro.62.081307.162908 · Cited by 207
The hidden life of integrative and conjugative elements
Delavat, F., Miyazaki, R., Carraro, N., Pradervand, N., & van der Meer, J. R. (2017) · FEMS Microbiology Reviews · doi:10.1093/femsre/fux008 · Cited by 221
Medema, M. H., Trefzer, A. C., Kovalchuk, A., van den Berg, M. A., Müller, U., Heijne, W. H. M., Wu, L., Alam, M. T., Ronning, C. M., Nierman, W. C., et al. (2010) · Genome Biology and Evolution · doi:10.1093/gbe/evq013 · Cited by 205
Genomic islands link secondary metabolism to functional adaptation in marine Actinobacteria
Penn, K., Jenkins, C., Nett, M., Udwary, D., Gontang, E. A., McGlinchey, R. P., Foster, B., Lapidus, A. L., Podell, S. B., Allen, E. E., et al. (2009) · The ISME Journal · doi:10.1038/ismej.2009.58 · Cited by 203
Physiological Functions of Bacterial “Multidrug” Efflux Pumps
Henderson, P. J. F., Maher, C., Elbourne, L. D. H., Eijkelkamp, B. A., Paulsen, I. T., & Hassan, K. A. (2021) · Chemical Reviews · doi:10.1021/acs.chemrev.0c01226 · Cited by 209
Evidence of a Large Novel Gene Pool Associated with Prokaryotic Genomic Islands
Hsiao, W., Ung, K. S. E., Aeschliman, D. S., Bryan, J., Finlay, B. B., & Brinkman, F. S. L. (2005) · PLoS Genetics · doi:10.1371/journal.pgen.0010062 · Cited by 204
Barcellos, F. G., Menna, P., Batista, J. S. D. S., & Hungría, M. (2007) · Applied and Environmental Microbiology · doi:10.1128/aem.01823-06 · Cited by 199
Revisiting the Central Dogma in the 21st Century
Shapiro, J. A. (2009) · Annals of the New York Academy of Sciences · doi:10.1111/j.1749-6632.2009.04990.x · Cited by 205
A Tale of Two Oxidation States: Bacterial Colonization of Arsenic-Rich Environments
Muller, D. A. E., Médigue, C., Koechler, S., Barbe, V., Barakat, M., Talla, E., Bonnefoy, V., Krin, E., Arsène‐Ploetze, F., Carapito, C., et al. (2007) · PLoS Genetics · doi:10.1371/journal.pgen.0030053 · Cited by 197
Ozer, E. A., Allen, J. P., & Hauser, A. R. (2014) · BMC Genomics · doi:10.1186/1471-2164-15-737 · Cited by 219
Inter-individual differences in the gene content of human gut bacterial species
Zhu, A., Sunagawa, S., Mende, D. R., & Bork, P. (2015) · Genome biology · doi:10.1186/s13059-015-0646-9 · Cited by 205
Wright, M. S., Baker‐Austin, C., Lindell, A. H., Stepanauskas, R., Stokes, H. W., & McArthur, J. V. (2008) · The ISME Journal · doi:10.1038/ismej.2008.8 · Cited by 192
Coombes, B. K., Wickham, M. E., Mascarenhas, M., Gruenheid, S., Finlay, B. B., & Karmali, M. A. (2008) · Applied and Environmental Microbiology · doi:10.1128/aem.02566-07 · Cited by 191
Gürlebeck, D., Thieme, F., & Bonas, U. (2005) · Journal of Plant Physiology · doi:10.1016/j.jplph.2005.11.011 · Cited by 190
Metadata
- Authors
- Dobrindt, U., Hochhut, B., Hentschel, U., & Hacker, J.
- Affiliations
- University of Würzburg (DE)
- Corresponding author
- Hacker, Jörg
- Venue
- Nature Reviews Microbiology
- Published
- 2004-05-01
- Volume
- 2
- Issue
- 5
- Pages
- 414-424
- ISSN
- 1740-1526 (ISSN-L)
- 1740-1534
- OpenAlex
- W1968146772
- Cited by
- 1,188
- References
- 98
- Citations by year
- 2026: 31 · 2025: 43 · 2024: 39 · 2023: 43 · 2022: 43 · 2021: 55 · 2020: 44 · 2019: 46 · 2018: 40 · 2017: 51 · 2016: 64 · 2015: 38 · 2014: 66 · 2013: 63 · 2012: 55
- FWCI
- 7.50
- Type
- journal article
- Language
- en
- Open access
- closed
- Locations
- Nature Reviews Microbiology (publishedVersion)
- PubMed (publishedVersion)
- Helmholtz Centre for Ocean Research Kiel (GEOMAR) (acceptedVersion)
- Funders
- Deutsche Forschungsgemeinschaft
- Bundesministerium für Bildung und Forschung
- Bayerische Forschungsstiftung
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Genetics › Bacterial Genetics and Biotechnology
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Genomics and Phylogenetic Studies
- Health Sciences › Medicine › Microbiology (medical) › Antibiotic Resistance in Bacteria
- Keywords
- genomic islands, pathogenicity islands, horizontal gene transfer, bacterial genome evolution, virulence, antibiotic resistance, symbiosis, commensal bacteria, environmental bacteria, mobile genetic elements
- MeSH terms
- Gram-Negative Bacteria, Gram-Positive Bacteria, Genome, Bacterial, Evolution, Molecular, Gene Transfer, Horizontal, Genomic Islands
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review