CRISPR prime editing with ribonucleoprotein complexes in zebrafish and primary human cells
Open accessAbstract
Prime editors have been delivered using DNA or RNA vectors. Here we demonstrate prime editing with purified ribonucleoprotein complexes. We introduced somatic mutations in zebrafish embryos with frequencies as high as 30% and demonstrate germline transmission. We also observed unintended insertions, deletions and prime editing guide RNA (pegRNA) scaffold incorporations. In HEK293T and primary human T cells, prime editing with purified ribonucleoprotein complexes introduced desired edits with frequencies of up to 21 and 7.5%, respectively.
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Integrity signals
Registry
Cites
Statistics
Claims the paper makes
The claims and statistics of this paper haven’t been checked yet.
Run the check — free, no account needed. It reads the open-access text and checks the sources it cites.
Claims other papers make about this one
Each is checked against this paper’s own text: does it say what the citing paper says it does?
Delivery of next-generation CRISPR tools by lentivirus or ribonucleoprotein complexes may be a suitable alternative strategy to DNA mutations in adult stem cells.
“Thus, delivery of next-generation CRISPR tools by lentivirus or ribonucleoprotein complexes may be a suitable alternative strategy to DNA mutations in adult stem cells.54,55,56”
From Protocol to create isogenic disease models from adult stem cell-derived organoids using next-generation CRISPR tools (2024) · cites this paper as [54]
The Abstract reports prime editing delivered as ribonucleoprotein complexes in zebrafish embryos and primary human T cells, and suggests that RNP delivery could broaden therapeutic applications. It does not establish lentiviral delivery or suitability in adult stem cells; it describes viral-vector delivery as challenging instead. The cited paper therefore supports the RNP possibility, but not the full claim. (LLM, conf=0.86)
Experimental — accuracy not yet measured
Self-check
Percentages, sums and reported differences re-computed from the paper’s own numbers.
The self-check needs the paper’s full text.
Cites
Search-and-replace genome editing without double-strand breaks or donor DNA
Anzalone, A. V., Randolph, P. B., Davis, J. R., Sousa, A. A., Koblan, L. W., Levy, J. M., Chen, P. J., Wilson, C., Newby, G. A., Raguram, A., et al. (2019) · Nature · doi:10.1038/s41586-019-1711-4 · Cited by 4,767 · see citing works
Efficient genome editing in zebrafish using a CRISPR-Cas system
Hwang, W. Y., Fu, Y., Reyon, D., Maeder, M. L., Tsai, S. Q., Sander, J. D., Peterson, R. T., Yeh, J.-R. J., & Joung, J. K. (2013) · Nature Biotechnology · doi:10.1038/nbt.2501 · Cited by 2,937 · see citing works
Self-citationBae, S., Park, J., & Kim, J.-S. (2014) · Bioinformatics · doi:10.1093/bioinformatics/btu048 · Cited by 2,339 · see citing works
Genome editing with CRISPR–Cas nucleases, base editors, transposases and prime editors
Anzalone, A. V., Koblan, L. W., & Liu, D. R. (2020) · Nature Biotechnology · doi:10.1038/s41587-020-0561-9 · Cited by 2,237 · see citing works
Dynamic Imaging of Genomic Loci in Living Human Cells by an Optimized CRISPR/Cas System
Chen, B., Gilbert, L. A., Cimini, B. A., Schnitzbauer, J., Zhang, W., Li, G., Park, J. S., Blackburn, E. H., Weissman, J. S., Qi, L. S., et al. (2013) · Cell · doi:10.1016/j.cell.2013.12.001 · Cited by 1,931 · see citing works
Self-citationKim, S., Kim, D., Cho, S. W., Kim, J., & Kim, J.-S. (2014) · Genome Research · doi:10.1101/gr.171322.113 · Cited by 1,856 · see citing works
Self-citationCRISPResso2 provides accurate and rapid genome editing sequence analysis
Clement, K., Rees, H. A., Canver, M. C., Gehrke, J. M., Farouni, R., Hsu, J. Y., Cole, M. A., Liu, D. R., Joung, J. K., Bauer, D. E., et al. (2019) · Nature Biotechnology · doi:10.1038/s41587-019-0032-3 · Cited by 1,632 · see citing works
Self-citationEfficient multiplex biallelic zebrafish genome editing using a CRISPR nuclease system
Jao, L.-E., Wente, S. R., & Chen, W. (2013) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1308335110 · Cited by 1,261 · see citing works
Prime genome editing in rice and wheat
Lin, Q., Zong, Y., Xue, C., Wang, S., Jin, S., Zhu, Z., Wang, Y., Anzalone, A. V., Raguram, A., Doman, J. L., et al. (2020) · Nature Biotechnology · doi:10.1038/s41587-020-0455-x · Cited by 873 · cited 1× · see citing works
“PE has been used to edit the genomes of mammalian cells and organoids in culture, plants, Drosophila, and somatic cells in mice with the PE components delivered as DNAs or RNAs 1,3–7 .”
Gagnon, J. A., Valen, E., Thyme, S. B., Huang, P., Ahkmetova, L., Pauli, A., Montague, T. G., Zimmerman, S., Richter, C., & Schier, A. F. (2014) · PLoS ONE · doi:10.1371/journal.pone.0098186 · Cited by 861 · see citing works
Grønskov, K., Ek, J., & Brondum-Nielsen, K. (2007) · Orphanet Journal of Rare Diseases · doi:10.1186/1750-1172-2-43 · Cited by 569 · see citing works
Levy, J. M., Yeh, W.-H., Pendse, N. D., Davis, J. R., Hennessey, E., Butcher, R. M., Koblan, L. W., Comander, J., Liu, Q., & Liu, D. R. (2020) · Nature Biomedical Engineering · doi:10.1038/s41551-019-0501-5 · Cited by 472 · see citing works
A procedure for removing red cells and dead cells from lymphoid cell suspensions
Davidson, W. F., & Parish, C. R. (1975) · Journal of Immunological Methods · doi:10.1016/0022-1759(75)90026-5 · Cited by 301 · see citing works
A Comparative Analysis of Individual RAS Mutations in Cancer Biology
Muñoz-Maldonado, C., Zimmer, Y., & Medová, M. (2019) · Frontiers in Oncology · doi:10.3389/fonc.2019.01088 · Cited by 250 · see citing works
Prime editing for functional repair in patient-derived disease models
Schene, I. F., Joore, I. P., Oka, R., Mokrý, M., van Vugt, A. H. M., van Boxtel, R., van der Doef, H. P. J., van der Laan, L. J. W., Verstegen, M. M. A., van Hasselt, P. M., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-19136-7 · Cited by 237 · see citing works
Efficient generation of mouse models with the prime editing system
Liu, Y., Li, X., He, S., Huang, S., Li, C., Chen, Y., Liu, Z., Huang, X., & Wang, X. (2020) · Cell Discovery · doi:10.1038/s41421-020-0165-z · Cited by 213 · see citing works
Programmable base editing of zebrafish genome using a modified CRISPR-Cas9 system
Zhang, Y., Qin, W., Lu, X., Xu, J., Huang, H., Bai, H., Li, S., & Lin, S. (2017) · Nature Communications · doi:10.1038/s41467-017-00175-6 · Cited by 188 · see citing works
Sürün, D., Schneider, A., Mircetic, J., Neumann, K., Lansing, F., Paszkowski‐Rogacz, M., Hänchen, V., Lee‐Kirsch, M. A., & Buchholz, F. (2020) · Genes · doi:10.3390/genes11050511 · Cited by 121 · see citing works
Precise genome engineering in Drosophila using prime editing
Bosch, J. A., Birchak, G., & Perrimon, N. (2020) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2021996118 · Cited by 94 · see citing works
Flagged first, then by citations
Cited by
Sorted by citations
Enhanced prime editing systems by manipulating cellular determinants of editing outcomes
Chen, P. J., Hussmann, J. A., Yan, J., Knipping, F., Ravisankar, P., Chen, P.-F., Chen, C.-D., Nelson, J. W., Newby, G. A., Şahin, M., et al. (2021) · Cell · doi:10.1016/j.cell.2021.09.018 · Cited by 820 · see citing works
Prime editing for precise and highly versatile genome manipulation
Chen, P. J., & Liu, D. R. (2022) · Nature Reviews Genetics · doi:10.1038/s41576-022-00541-1 · Cited by 621 · see citing works
CRISPR in cancer biology and therapy
Katti, A., Diaz, B. J., Caragine, C. M., Sanjana, N. E., & Dow, L. E. (2022) · Nature reviews. Cancer · doi:10.1038/s41568-022-00441-w · Cited by 440 · see citing works
The CRISPR-Cas toolbox and gene editing technologies
Liu, G., Lin, Q., Jin, S., & Gao, C. (2021) · Molecular Cell · doi:10.1016/j.molcel.2021.12.002 · Cited by 410 · see citing works
Engineering the next-generation of CAR T-cells with CRISPR-Cas9 gene editing
Dimitri, A. J., Herbst, F., & Fraietta, J. A. (2022) · Molecular Cancer · doi:10.1186/s12943-022-01559-z · Cited by 370 · see citing works
An engineered prime editor with enhanced editing efficiency in plants
Zong, Y., Liu, Y., Xue, C., Li, B., Li, X., Wang, Y., Li, J., Liu, G., Huang, X., Cao, X., et al. (2022) · Nature Biotechnology · doi:10.1038/s41587-022-01254-w · Cited by 248 · see citing works
Genotoxic effects of base and prime editing in human hematopoietic stem cells
Fiumara, M., Ferrari, S., Omer-Javed, A., Beretta, S., Albano, L., Canarutto, D., Varesi, A., Gaddoni, C., Brombin, C., Cugnata, F., et al. (2024) · Nature Biotechnology · doi:10.1038/s41587-023-01915-4 · Cited by 220 · see citing works
CRISPR-based genome editing through the lens of DNA repair
Nambiar, T. S., Baudrier, L., Billon, P., & Ciccia, A. (2022) · Molecular Cell · doi:10.1016/j.molcel.2021.12.026 · Cited by 214 · see citing works
In vivo somatic cell base editing and prime editing
Newby, G. A., & Liu, D. R. (2021) · Molecular Therapy · doi:10.1016/j.ymthe.2021.09.002 · Cited by 192 · see citing works
Prime editing: advances and therapeutic applications
Zhao, Z., Shang, P., Mohanraju, P., & Geijsen, N. (2023) · Trends in biotechnology · doi:10.1016/j.tibtech.2023.03.004 · Cited by 199 · see citing works
Jang, H., Jo, D. H., Cho, C. S., Shin, J. H., Seo, J. H., Yu, G., Gopalappa, R., Kim, D., Cho, S., Kim, J. H., et al. (2021) · Nature Biomedical Engineering · doi:10.1038/s41551-021-00788-9 · Cited by 184 · see citing works
Self-citationPrime editing efficiency and fidelity are enhanced in the absence of mismatch repair
da Silva, J. F., Oliveira, G. P., Arasa-Verge, E. A., Kagiou, C., Moretton, A., Timelthaler, G., Jiricny, J., & Loizou, J. I. (2022) · Nature Communications · doi:10.1038/s41467-022-28442-1 · Cited by 182 · see citing works
Next-Generation CAR T-cell Therapies
Young, R. M., Engel, N. W., Uslu, U., Wellhausen, N., & June, C. H. (2022) · Cancer Discovery · doi:10.1158/2159-8290.cd-21-1683 · Cited by 182 · see citing works
Designing and executing prime editing experiments in mammalian cells
Doman, J. L., Sousa, A. A., Randolph, P. B., Chen, P. J., & Liu, D. R. (2022) · Nature Protocols · doi:10.1038/s41596-022-00724-4 · Cited by 172 · see citing works
A split prime editor with untethered reverse transcriptase and circular RNA template
Liu, B., Dong, X., Cheng, H., Zheng, C., Chen, Z., Rodríguez, T., Liang, S., Xue, W., & Sontheimer, E. J. (2022) · Nature Biotechnology · doi:10.1038/s41587-022-01255-9 · Cited by 169 · see citing works
Lei, T., Wang, Y., Zhang, Y., Yang, Y., Cao, J., Huang, J., Chen, J., Chen, H., Zhang, J., wang, L., et al. (2024) · Leukemia · doi:10.1038/s41375-024-02444-y · Cited by 141 · see citing works
Chen, L., Hong, M., Luan, C., Gao, H., Ru, G., Guo, X., Zhang, D., Zhang, S., Li, C., Wu, J., et al. (2023) · Nature Biotechnology · doi:10.1038/s41587-023-01821-9 · Cited by 131 · see citing works
Prediction of efficiencies for diverse prime editing systems in multiple cell types
Yu, G., Kim, H. K., Park, J., Kwak, H., Cheong, Y., Kim, D., Kim, J.-Y., Kim, J., & Kim, H. H. (2023) · Cell · doi:10.1016/j.cell.2023.03.034 · Cited by 128 · see citing works
Self-citationMassively parallel base editing to map variant effects in human hematopoiesis
Martin-Rufino, J. D., Castano, N., Pang, M., Grody, E. I., Joubran, S. R., Caulier, A., Wahlster, L., Li, T., Qiu, X., Riera-Escandell, A. M., et al. (2023) · Cell · doi:10.1016/j.cell.2023.03.035 · Cited by 123 · see citing works
CRISPR/Cas9 and next generation sequencing in the personalized treatment of Cancer
Selvakumar, S. C., Preethi, K. A., Ross, K., Tusubira, D., Khan, M. W. A., Mani, P., Rao, T. N., & Sekar, D. (2022) · Molecular Cancer · doi:10.1186/s12943-022-01565-1 · Cited by 122 · see citing works
Enhancement of prime editing via xrRNA motif-joined pegRNA
Zhang, G., Liu, Y., Huang, S., Qu, S., Cheng, D., Yao, Y., Ji, Q., Wang, X., Huang, X., & Liu, J. (2022) · Nature Communications · doi:10.1038/s41467-022-29507-x · Cited by 113 · see citing works
Engineered CRISPR prime editors with compact, untethered reverse transcriptases
Grünewald, J., Miller, B. R., Szalay, R. N., Cabeceiras, P. K., Woodilla, C. J., Holtz, E. J. B., Petri, K., & Joung, J. K. (2022) · Nature Biotechnology · doi:10.1038/s41587-022-01473-1 · Cited by 98 · see citing works
Self-citationA Review on Advanced CRISPR-Based Genome-Editing Tools: Base Editing and Prime Editing
Sichani, A. S., Ranjbar, M., Baneshi, M., Zadeh, F. T., & Fallahi, J. (2022) · Molecular Biotechnology · doi:10.1007/s12033-022-00639-1 · Cited by 97 · see citing works
Generation of a more efficient prime editor 2 by addition of the Rad51 DNA-binding domain
Song, M., Lim, J. M., Min, S., Oh, J., Kim, D. Y., Woo, J., Nishimasu, H., Cho, S., Yoon, S., & Kim, S. (2021) · Nature Communications · doi:10.1038/s41467-021-25928-2 · Cited by 88 · see citing works
Self-citationChromatin context-dependent regulation and epigenetic manipulation of prime editing
Li, X., Chen, W., Martin, B., Calderon, D., Lee, C., Choi, J., Chardon, F. M., McDiarmid, T. A., Daza, R. M., Kim, H., et al. (2024) · Cell · doi:10.1016/j.cell.2024.03.020 · Cited by 90 · see citing works
Optimized nickase- and nuclease-based prime editing in human and mouse cells
Adikusuma, F., Lushington, C., Arudkumar, J., Godahewa, G. I., Chey, Y. C. J., Gierus, L., Piltz, S., Geiger, A., Jain, Y., Reti, D., et al. (2021) · Nucleic Acids Research · doi:10.1093/nar/gkab792 · Cited by 87 · see citing works
Click editing enables programmable genome writing using DNA polymerases and HUH endonucleases
da Silva, J. F., Tou, C. J., King, E. M., Eller, M. L., Rufino‐Ramos, D., Ma, L., Cromwell, C. R., Metović, J., Benning, F. M. C., Chao, L. H., et al. (2024) · Nature Biotechnology · doi:10.1038/s41587-024-02324-x · Cited by 83 · see citing works
Genome-wide profiling of prime editor off-target sites in vitro and in vivo using PE-tag
Liang, S., Liu, P., Ponnienselvan, K., Suresh, S., Chen, Z., Kramme, C. C., Chatterjee, P., Zhu, L. J., Sontheimer, E. J., Xue, W., et al. (2023) · Nature Methods · doi:10.1038/s41592-023-01859-2 · Cited by 79 · see citing works
Precise genome-editing in human diseases: mechanisms, strategies and applications
Zheng, Y., Li, Y., Zhou, K., Li, T., VanDusen, N. J., & Hua, Y. (2024) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-024-01750-2 · Cited by 80 · see citing works
Synthetic lethal strategies for the development of cancer therapeutics
Ngoi, N. Y. L., Gallo, D., Torrado, C., Nardo, M., Durocher, D., & Yap, T. A. (2024) · Nature Reviews Clinical Oncology · doi:10.1038/s41571-024-00966-z · Cited by 78 · see citing works
Integrating non-mammalian model organisms in the diagnosis of rare genetic diseases in humans
Yamamoto, S., Kanca, O., Wangler, M. F., & Bellen, H. J. (2023) · Nature Reviews Genetics · doi:10.1038/s41576-023-00633-6 · Cited by 75 · see citing works
Genome-edited allogeneic donor “universal” chimeric antigen receptor T cells
Qasim, W. (2022) · Blood · doi:10.1182/blood.2022016204 · Cited by 68 · see citing works
Genetic engineering meets hematopoietic stem cell biology for next-generation gene therapy
Ferrari, S., Valeri, E., Conti, A., Scala, S., Aprile, A., Micco, R. D., Kajaste‐Rudnitski, A., Montini, E., Ferrari, G., Aiuti, A., et al. (2023) · Cell stem cell · doi:10.1016/j.stem.2023.04.014 · Cited by 71 · see citing works
Easy-Prime: a machine learning–based prime editor design tool
Li, Y., Chen, J., Tsai, S. Q., & Cheng, Y. (2021) · Genome biology · doi:10.1186/s13059-021-02458-0 · Cited by 66 · see citing works
Highly efficient generation of isogenic pluripotent stem cell models using prime editing
Li, H., Busquets, O., Verma, Y., Syed, K. M., Kutnowski, N., Pangilinan, G. R., Gilbert, L. A., Bateup, H. S., Rio, D. C., Hockemeyer, D. F., et al. (2022) · eLife · doi:10.7554/elife.79208 · Cited by 67 · see citing works
Targeted genomic translocations and inversions generated using a paired prime editing strategy
Kweon, J., Hwang, H., Ryu, H., Jang, A.-H., Kim, D., & Kim, Y. (2022) · Molecular Therapy · doi:10.1016/j.ymthe.2022.09.008 · Cited by 67 · see citing works
Self-citationCRISPR/Cas9 ribonucleoprotein-mediated genome and epigenome editing in mammalian cells
Bloomer, H., Khirallah, J., Li, Y., & Xu, Q. (2021) · Advanced Drug Delivery Reviews · doi:10.1016/j.addr.2021.114087 · Cited by 70 · see citing works
Xu, W., Zhang, S., Qin, H., & Yao, K. (2024) · Journal of Translational Medicine · doi:10.1186/s12967-024-05957-3 · Cited by 67 · see citing works
Ponnienselvan, K., Liu, P., Nyalile, T., Oikemus, S., Maitland, S. A., Lawson, N. D., Luban, J., & Wolfe, S. A. (2023) · Nucleic Acids Research · doi:10.1093/nar/gkad456 · Cited by 64 · see citing works
Targeted genome editing with a DNA-dependent DNA polymerase and exogenous DNA-containing templates
Liu, B., Dong, X., Zheng, C., Keener, D. G., Chen, Z., Cheng, H., Watts, J. K., Xue, W., & Sontheimer, E. J. (2023) · Nature Biotechnology · doi:10.1038/s41587-023-01947-w · Cited by 63 · see citing works
SpG and SpRY variants expand the CRISPR toolbox for genome editing in zebrafish
Liang, F., Zhang, Y., Li, L., Yang, Y., Fei, J., Liu, Y., & Qin, W. (2022) · Nature Communications · doi:10.1038/s41467-022-31034-8 · Cited by 60 · see citing works
WT-PE: Prime editing with nuclease wild-type Cas9 enables versatile large-scale genome editing
Tao, R. X., Wang, Y., Hu, Y. F., Jiao, Y., Zhou, L., Jiang, L., Li, L., He, X., Li, M., Yu, Y., et al. (2022) · Signal Transduction and Targeted Therapy · doi:10.1038/s41392-022-00936-w · Cited by 58 · see citing works
Harnessing DSB repair to promote efficient homology-dependent and -independent prime editing
Peterka, M., Akrap, N., Li, S., Wimberger, S., Hsieh, P.-P., Degtev, D., Bestas, B., Barr, J., van de Plassche, S., Mendoza-García, P., et al. (2022) · Nature Communications · doi:10.1038/s41467-022-28771-1 · Cited by 56 · see citing works
Current advancement in the application of prime editing
Huang, Z., & Liu, G. (2023) · Frontiers in Bioengineering and Biotechnology · doi:10.3389/fbioe.2023.1039315 · Cited by 55 · see citing works
Prime Editing for Human Gene Therapy: Where Are We Now?
Godbout, K., & Tremblay, J. P. (2023) · Cells · doi:10.3390/cells12040536 · Cited by 52 · see citing works
New advances in CRISPR/Cas-mediated precise gene-editing techniques
Richardson, C., Kelsh, R. N., & Richardson, R. J. (2023) · Disease Models & Mechanisms · doi:10.1242/dmm.049874 · Cited by 48 · see citing works
Disease modeling by efficient genome editing using a near PAM-less base editor in vivo
Rosello, M., Serafini, M., Mignani, L., Finazzi, D., Giovannangeli, C., Mione, M., Concordet, J., & Bene, F. D. (2022) · Nature Communications · doi:10.1038/s41467-022-31172-z · Cited by 44 · see citing works
TAPE-seq is a cell-based method for predicting genome-wide off-target effects of prime editor
Kwon, J., Kim, M., Bae, S.-M., Jo, A., Kim, Y.-H., & Lee, J. K. (2022) · Nature Communications · doi:10.1038/s41467-022-35743-y · Cited by 44 · see citing works
Structural basis for pegRNA-guided reverse transcription by a prime editor
Shuto, Y., Nakagawa, R., Zhu, S., Hoki, M., Omura, S. N., Hirano, H., Itoh, Y., Zhang, F., & Nureki, O. (2024) · Nature · doi:10.1038/s41586-024-07497-8 · Cited by 44 · see citing works
Increasing intracellular dNTP levels improves prime editing efficiency
Liu, P., Ponnienselvan, K., Nyalile, T., Oikemus, S., Joynt, A. T., Iyer, S., Kelly, K. L., Guo, D., Kyawe, P. P., Vanderleeden, E., et al. (2024) · Nature Biotechnology · doi:10.1038/s41587-024-02405-x · Cited by 42 · see citing works
Zebrafish: A Versatile and Powerful Model for Biomedical Research
Siddiqui, S., Siddiqui, H., Riguene, E., & Nomikos, M. (2025) · BioEssays · doi:10.1002/bies.70080 · Cited by 40 · see citing works
Lee, B., Lozano, R. J., & Dunbar, C. E. (2021) · Molecular Therapy · doi:10.1016/j.ymthe.2021.09.001 · Cited by 38 · see citing works
Marker-free co-selection for successive rounds of prime editing in human cells
Levesque, S., Mayorga, D., Fiset, J.-P., Goupil, C., Duringer, A., Loiselle, A., Bouchard, E., Agudelo, D., & Doyon, Y. (2022) · Nature Communications · doi:10.1038/s41467-022-33669-z · Cited by 40 · see citing works
Progress in Gene-Editing Technology of Zebrafish
Li, Y., Jia, Z., Zhang, S., & He, X. (2021) · Biomolecules · doi:10.3390/biom11091300 · Cited by 39 · see citing works
Prime Editing: An All-Rounder for Genome Editing
Lu, C., Kuang, J., Shao, T., Xie, S., Li, M., Zhu, L., & Zhu, L. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms23179862 · Cited by 38 · see citing works
Current advances of CRISPR-Cas technology in cell therapy
Qiu, H.-Y., Ji, R.-J., & Zhang, Y. (2022) · Cell Insight · doi:10.1016/j.cellin.2022.100067 · Cited by 38 · see citing works
Rapid generation of long, chemically modified pegRNAs for prime editing
Lei, X., Huang, A., Chen, D., Wang, X., Ji, R.-J., Wang, J., Zhang, Y., Zhang, Y., Lu, S., Zhang, K., et al. (2024) · Nature Biotechnology · doi:10.1038/s41587-024-02394-x · Cited by 31 · see citing works
Base editors: development and applications in biomedicine
Liang, Y., Chen, F., Wang, K., & Lai, L. (2023) · Frontiers of Medicine · doi:10.1007/s11684-023-1013-y · Cited by 32 · see citing works
BacPE: a versatile prime-editing platform in bacteria by inhibiting DNA exonucleases
Zhang, H., Ma, J., Wu, Z., Chen, X., Qian, Y., Chen, W., Wang, Z., Zhang, Y. P., Zhu, H., Huang, X., et al. (2024) · Nature Communications · doi:10.1038/s41467-024-45114-4 · Cited by 32 · see citing works
Self-citationPrime Editing Efficiency and Fidelity are Enhanced in the Absence of Mismatch RepairPreprint
da Silva, J. F., Oliveira, G., Arasa-Verge, E. A., Kagiou, C., Moretton, A., Timelthaler, G., Jiricny, J., & Loizou, J. (2021) · bioRxiv (Cold Spring Harbor Laboratory) · doi:10.1101/2021.09.30.462548 · Cited by 32 · see citing works
Ryan, D. E., Diamant-Levi, T., Steinfeld, I., Taussig, D., Visal-Shah, S., Thakker, S., Lunstad, B. D., Kaiser, R. J., McCaffrey, R. M., Ortiz, M., et al. (2022) · Biochemistry · doi:10.1021/acs.biochem.1c00768 · Cited by 29 · see citing works
Expansion of the prime editing modality with Cas9 from Francisella novicida
Oh, Y., Lee, W.-J., Hur, J. K., Song, W., Lee, Y., Kim, H., Gwon, L. W., Kim, Y., Park, Y., Kim, C. H., et al. (2022) · Genome biology · doi:10.1186/s13059-022-02644-8 · Cited by 29 · see citing works
Efficient prime editing in two-cell mouse embryos using PEmbryo
Kim, R., McNulty, R., Joyce, B. W., Mollica, A., Chen, P. J., Ravisankar, P., Law, B. K., Liu, D. R., Toettcher, J. E., Ivakine, E. A., et al. (2024) · Nature Biotechnology · doi:10.1038/s41587-023-02106-x · Cited by 28 · see citing works
Recent advances in prime editing technologies and their promises for therapeutic applications
Zeng, H., Daniel, T. C., Lingineni, A., Chee, K., Talloo, K., & Gao, X. (2024) · Current Opinion in Biotechnology · doi:10.1016/j.copbio.2024.103071 · Cited by 27 · see citing works
Prime editing: current advances and therapeutic opportunities in human diseases
Fu, Y., He, X., Gao, X. D., Li, F., Ge, S., Yang, Z. H., & Fan, X. (2023) · 中国科学通报:英文版 · doi:10.1016/j.scib.2023.11.015 · Cited by 27 · see citing works
Gene editing to enhance the efficacy of cancer cell therapies
Murty, T., & Mackall, C. L. (2021) · Molecular Therapy · doi:10.1016/j.ymthe.2021.10.001 · Cited by 25 · see citing works
Correction of Beta-Thalassemia IVS-II-654 Mutation in a Mouse Model Using Prime Editing
Zhang, H., Sun, R., Fei, J., Chen, H., & Lu, D. (2022) · International Journal of Molecular Sciences · doi:10.3390/ijms23115948 · Cited by 26 · see citing works
Prime Editing: A Revolutionary Technology for Precise Treatment of Genetic Disorders
Li, M., Lin, Y., Cheng, Q., & Wei, T. (2025) · Cell Proliferation · doi:10.1111/cpr.13808 · Cited by 27 · see citing works
Disruption of grin2B, an ASD-associated gene, produces social deficits in zebrafish
Zoodsma, J. D., Keegan, E. J., Moody, G. R., Bhandiwad, A. A., Napoli, A. J., Burgess, H. A., Wollmuth, L. P., & Sirotkin, H. I. (2022) · Molecular Autism · doi:10.1186/s13229-022-00516-3 · Cited by 26 · see citing works
Future Perspectives of Prime Editing for the Treatment of Inherited Retinal Diseases
Hansen, S., McClements, M. E., Corydon, T. J., & MacLaren, R. E. (2023) · Cells · doi:10.3390/cells12030440 · Cited by 25 · see citing works
Danio rerio: A Promising Tool for Neurodegenerative Dysfunctions
Kiran, N. S., Yashaswini, C., Sangaraju, V. V., & Rajagopal, S. (2025) · Springer eBooks · doi:10.1007/978-981-97-7324-4_3 · Cited by 25 · see citing works
Enhancing CRISPR prime editing by reducing misfolded pegRNA interactions
Zhang, W., Petri, K., Ma, J., Lee, H., Tsai, C., Joung, J. K., & Yeh, J.-R. J. (2024) · eLife · doi:10.7554/elife.90948.2 · Cited by 24 · see citing works
Self-citationde Vrieze, E., de Bruijn, S. E., Reurink, J., Broekman, S., van de Riet, V., Aben, M., Kremer, H., & van Wijk, E. (2021) · International Journal of Molecular Sciences · doi:10.3390/ijms22179429 · Cited by 24 · see citing works
Screening Platforms for Genetic Epilepsies—Zebrafish, iPSC-Derived Neurons, and Organoids
Shcheglovitov, A., & Peterson, R. T. (2021) · Neurotherapeutics · doi:10.1007/s13311-021-01115-5 · Cited by 23 · see citing works
Better living through chemistry: CRISPR/Cas engineered T cells for cancer immunotherapy
Wellhausen, N., Agarwal, S., Rommel, P. C., Gill, S. I., & June, C. H. (2021) · Current Opinion in Immunology · doi:10.1016/j.coi.2021.10.008 · Cited by 25 · see citing works
Development and Application of CRISPR-Cas Based Tools
Hu, Y., & Li, W. (2022) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2022.834646 · Cited by 24 · see citing works
Conditional mutagenesis strategies in zebrafish
Kalvaitytė, M., & Balciunas, D. (2022) · Trends in Genetics · doi:10.1016/j.tig.2022.04.007 · Cited by 24 · see citing works
Petri, K., D’Ippolito, E., Künkele, A., Koehl, U., Busch, D. H., Einsele, H., & Hudecek, M. (2025) · Nature Reviews Clinical Oncology · doi:10.1038/s41571-025-01072-4 · Cited by 23 · see citing works
Self-citationEnhancing CRISPR prime editing by reducing misfolded pegRNA interactions
Zhang, W., Petri, K., Ma, J., Lee, H., Tsai, C., Joung, J. K., & Yeh, J.-R. J. (2023) · eLife · doi:10.7554/elife.90948 · Cited by 42 · see citing works
Self-citationCattaneo, C., Enzo, E., Rosa, L. D., Sercia, L., Consiglio, F., Forcato, M., Bicciato, S., Paiardini, A., Basso, G., Tagliafico, E., et al. (2023) · Molecular Therapy · doi:10.1016/j.ymthe.2023.11.027 · Cited by 23 · see citing works
Lu, Y., Mbakam, C. H., Song, B., Bendavid, E., & Tremblay, J. P. (2022) · Frontiers in Genome Editing · doi:10.3389/fgeed.2022.892769 · Cited by 21 · see citing works
Research progress of base editing and prime editing tools based on the CRISPR/Cas system
Gao, H., Gao, S., Kan, G., Valentovich, L. N., & An, Y. (2025) · Molecular Therapy — Nucleic Acids · doi:10.1016/j.omtn.2025.102771 · Cited by 23 · see citing works
Successful Correction by Prime Editing of a Mutation in the RYR1 Gene Responsible for a Myopathy
Godbout, K., Rousseau, J., & Tremblay, J. P. (2023) · Cells · doi:10.3390/cells13010031 · Cited by 20 · see citing works
Hazel, K., Singh, D., He, S., Guertin, Z., Husser, M. C., & Helfield, B. L. (2025) · Molecular Therapy · doi:10.1016/j.ymthe.2025.01.013 · Cited by 18 · see citing works
Improving editing efficiency of prime editor in plants
Ahmad, N., Awan, M. J. A., & Mansoor, S. (2022) · Trends in Plant Science · doi:10.1016/j.tplants.2022.09.001 · Cited by 18 · see citing works
Celotti, M., Derks, L. L. M., van Es, J., van Boxtel, R., Clevers, H., & Geurts, M. H. (2024) · STAR Protocols · doi:10.1016/j.xpro.2024.103189 · Cited by 17 · see citing works
Recent Advances in Double-Strand Break-Free Kilobase-Scale Genome Editing Technologies
Tou, C. J., & Kleinstiver, B. P. (2022) · Biochemistry · doi:10.1021/acs.biochem.2c00311 · Cited by 17 · see citing works
piggyPrime: High-Efficacy Prime Editing in Human Cells Using piggyBac-Based DNA Transposition
Wolff, J. H., Haldrup, J., Thomsen, E. A., Andersen, S., & Mikkelsen, J. G. (2021) · Frontiers in Genome Editing · doi:10.3389/fgeed.2021.786893 · Cited by 17 · see citing works
Precise mutagenesis in zebrafish using cytosine base editors
Rosello, M., Serafini, M., Concordet, J., & Bene, F. D. (2023) · Nature Protocols · doi:10.1038/s41596-023-00854-3 · Cited by 15 · see citing works
Prime-editing methods and pegRNA design programs
Mikhaylova, E. V., Kuluev, B. R., Gerashchenkov, G. A., Chemeris, D. A., Garafutdinov, R. R., Kuluev, A. R., Baymiev, A. K., Baymiev, A. K., & Chemeris, A. V. (2024) · Molecular Biology · doi:10.1134/s0026893324010084 · Cited by 15 · see citing works
Emerging Perspectives on Prime Editor Delivery to the Brain
BenDavid, E., Ramezanian, S., Lu, Y., Rousseau, J., Schroeder, A., Lavertu, M., & Tremblay, J. P. (2024) · Pharmaceuticals · doi:10.3390/ph17060763 · Cited by 15 · see citing works
Clinical development of allogeneic chimeric antigen receptor αβ-T cells
Georgiadis, C., Preece, R., & Qasim, W. (2025) · Molecular Therapy · doi:10.1016/j.ymthe.2025.03.040 · Cited by 16 · see citing works
CRISPR delivery systems for organ-specific targeting: Advances and challenges
Du, J., Wu, Q., Liu, C., Wang, N., & Gong, C. (2025) · Precision medicine and engineering. · doi:10.1016/j.preme.2025.100048 · Cited by 17 · see citing works
Huang, C., Li, Q., & Li, J. (2022) · Medical Review · doi:10.1515/mr-2022-0029 · Cited by 19 · see citing works
Zhou, S., Lenk, L. J., Gao, Y., Wang, Y., Zhao, X., Pan, M., Huang, S., Sun, K., Kalds, P., Luo, Q., et al. (2023) · BMC Genomics · doi:10.1186/s12864-023-09409-y · Cited by 15 · see citing works
An optimized prime editing system for efficient modification of the pig genome
Qi, Y., Zhang, Y., Tian, S., Zong, R., Yan, X., Wang, Y., Wang, Y., & Zhao, J. (2023) · Science China Life Sciences · doi:10.1007/s11427-022-2334-y · Cited by 15 · see citing works
Toward the use of novel alternative methods in epilepsy modeling and drug discovery
Sanz, C. M., Navarro, M. M., Diaz, D. C., Sánchez‐Elexpuru, G., & Donato, V. D. (2023) · Frontiers in Neurology · doi:10.3389/fneur.2023.1213969 · Cited by 16 · see citing works
Speciation and adaptation research meets genome editing
Ansai, S., & Kitano, J. (2022) · Philosophical Transactions of the Royal Society B Biological Sciences · doi:10.1098/rstb.2020.0516 · Cited by 16 · see citing works
Prime editing strategies to mediate exon skipping in DMD gene
Mbakam, C. H., Roustant, J., Rousseau, J., Yaméogo, P., Lu, Y., Bigot, A., Mamchaoui, K., Mouly, V., Lamothe, G., & Tremblay, J. P. (2023) · Frontiers in Medicine · doi:10.3389/fmed.2023.1128557 · Cited by 16 · see citing works
High-efficiency targeted transgene integration via primed micro-homologues
Wang, C., Fang, S., Chen, Y., Tang, N., Jiao, G., Hu, Y., Li, J., Shan, Q., Wang, X., Feng, G., et al. (2023) · Cell Discovery · doi:10.1038/s41421-023-00552-0 · Cited by 14 · see citing works
- Authors
- Petri, K., Zhang, W., Ma, J., Schmidts, A., Lee, H., Horng, J. E., Kim, D. Y., Kurt, I. C., Clement, K., Hsu, J. Y., Pinello, L., Maus, M. V., Joung, J. K., & Yeh, J.-R. J.
- Affiliations
- Harvard University (US)
- Corresponding author
- Joung, J. Keith
- Yeh, Jing-Ruey Joanna
- ORCID
- Venue
- Nature Biotechnology
- Published
- 2021-04-29
- Volume
- 40
- Issue
- 2
- Pages
- 189-193
- ISSN
- 0733-222X (ISSN-L)
- 1087-0156
- 1546-1696
- PMC
- PMC8553808
- OpenAlex
- W3158544805
- Cited by
- 208
- References
- 19
- Citations by year
- 2026: 23 · 2025: 27 · 2024: 49 · 2023: 44 · 2022: 44 · 2021: 21
- FWCI
- 12.48
- Type
- journal article
- Language
- en
- Update notices
- correction (2021-05-13)
- Open access
- green
- www.ncbi.nlm.nih.gov
- Locations
- Nature Biotechnology (publishedVersion)
- PubMed (publishedVersion)
- PubMed Central (acceptedVersion)
- Funders
- Deutsche Forschungsgemeinschaft (417577129)
- China Scholarship Council
- John Hansen Research Grant by the DKMS
- U.S. Department of Health & Human Services | NIH | National Human Genome Research Institute (RM1 HG009490, R35 HG010717)
- U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (R35 GM118158, R01 GM134069)
- United States Department of Defense | Defense Advanced Research Projects Agency (HR0011-17-2-0042)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › CRISPR and Genetic Engineering
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA regulation and disease
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › RNA Interference and Gene Delivery
- Keywords
- ribonucleoprotein complexes, germline transmission, zebrafish embryos, human T cells, HEK293T cells, genome editing
- MeSH terms
- Gene Editing, RNA, Guide, CRISPR-Cas Systems, Animals, Humans, Ribonucleoproteins, Zebrafish, RNA, Guide, Kinetoplastida, HEK293 Cells, Clustered Regularly Interspaced Short Palindromic Repeats, CRISPR-Cas Systems
About these checks
Registry, retraction, Cites and statistics results are computed, not judged, with one exception: a printed reference that no index lists is read once by a model before it counts as a citation error. Claims are extracted by a model and kept only when their quote appears verbatim in the text; each cited source is then checked, with a model’s help, for whether it says what the claim relies on. Those verdicts can be wrong — read the claim’s quote and the cited source before relying on one.
Statistics and arithmetic are recomputed, not judged.
Confidence bands are shown only for fields calibrated on our annotated test set. None is calibrated yet, so no band is shown.
What counts as a claim ›How we measure confidence ›How we check this ›
Are you an author, or do you see a problem with this page? Request a review