Origin and evolution of plexins, semaphorins, and Met receptor tyrosine kinases
Open accessAbstract
The transition from unicellular to multicellular organisms poses the question as to when genes that regulate cell-cell interactions emerged during evolution. The receptor and ligand pairing of plexins and semaphorins regulates cellular interactions in a wide range of developmental and physiological contexts. We surveyed here genomes of unicellular eukaryotes and of non-bilaterian and bilaterian Metazoa and performed phylogenetic analyses to gain insight into the evolution of plexin and semaphorin families. Remarkably, we detected plexins and semaphorins in unicellular choanoflagellates, indicating their evolutionary origin in a common ancestor of Choanoflagellida and Metazoa. The plexin domain structure is conserved throughout all clades; in contrast, semaphorins are structurally diverse. Choanoflagellate semaphorins are transmembrane proteins with multiple fibronectin type III domains following the N-terminal Sema domain (termed Sema-FN). Other previously not yet described semaphorin classes include semaphorins of Ctenophora with tandem immunoglobulin domains (Sema-IG) and secreted semaphorins of Echinoderamata (Sema-SP, Sema-SI). Our study also identified Met receptor tyrosine kinases (RTKs), which carry a truncated plexin extracellular domain, in several bilaterian clades, indicating evolutionary origin in a common ancestor of Bilateria. In addition, a novel type of Met-like RTK with a complete plexin extracellular domain was detected in Lophotrochozoa and Echinodermata (termed Met-LP RTK). Our findings are consistent with an ancient function of plexins and semaphorins in regulating cytoskeletal dynamics and cell adhesion that predates their role as axon guidance molecules.
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Plexins have a highly conserved domain structure, particularly the ring-shaped extracellular domain and intracellular Ras-GAP domain.
“Our recent evolutionary studies revealed a highly conserved domain structure of plexins, particularly the ring-shaped extracellular domain and intracellular Ras-GAP domain19, 20”
From Regulation of cell distancing in peri-plaque glial nets by Plexin-B1 affects glial activation and amyloid compaction in Alzheimer’s disease (2024) · cites this paper as [20]
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- Authors
- Junqueira Alves, C., Yotoko, K., Zou, H., & Friedel, R. H.
- Affiliations
- Universidade Federal de Viçosa (BR)
- Icahn School of Medicine at Mount Sinai (US)
- Corresponding author
- Friedel, Roland H.
- Venue
- Scientific Reports
- Published
- 2019-02-13
- Volume
- 9
- Issue
- 1
- Pages
- 1970-1970
- ISSN
- 2045-2322 (ISSN-L)
- PMC
- PMC6374515
- OpenAlex
- W2918457706
- Cited by
- 72
- References
- 64
- Citations by year
- 2026: 5 · 2025: 10 · 2024: 13 · 2023: 9 · 2022: 7 · 2021: 18 · 2020: 6 · 2019: 4
- FWCI
- 4.18
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Scientific Reports (publishedVersion, cc-by-sa)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Científicas) (publishedVersion, other-oa)
- Americanae (AECID Library) (submittedVersion, other-oa)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
- Funders
- National Council for Scientific and Technological Development
- U.S. Department of Health & Human Services | NIH | National Institute of Neurological Disorders and Stroke (R01 NS092735)
- Topics
- Life Sciences › Neuroscience › Cellular and Molecular Neuroscience › Axon Guidance and Neuronal Signaling
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Developmental Biology and Gene Regulation
- Physical Sciences › Earth and Planetary Sciences › Paleontology › Marine Invertebrate Physiology and Ecology
- Keywords
- plexins, semaphorins, MET receptor tyrosine kinase, choanoflagellates, bilaterian origin, Ctenophora, Echinodermata, Lophotrochozoa, axon guidance, cell adhesion, cytoskeletal dynamics, unicellular to multicellular transition
- MeSH terms
- Protein Domains, Amino Acid Sequence, Animals, Echinodermata, Biological Evolution, Humans, Nerve Tissue Proteins, Receptors, Cell Surface, Cell Adhesion Molecules, Proto-Oncogene Proteins c-met, Databases, Genetic, Semaphorins, Choanoflagellata
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