Relationships of Non-coding RNA with diabetes and depression
Open accessAbstract
In order to study the molecular differences between type 2 diabetes mellitus (T2DM) and T2DM with depression (DD), we aimed to screen the differential expression of lncRNA, mRNA, and circRNA in the blood of patients with T2DM and DD. Based on the self-rating depression scale (SDS), patient health questionnaire 9 (PHQ9), blood glucose and HbA1c, we divided the patients into T2DM and DD group. Peripheral blood was collected from the two groups of patients to perform lncRNA, mRNA, and circRNA expression profiling and screening DD-related specific molecules. Subsequently, bioinformatics analysis was performed to investigate the functions of differentially expressed genes (DEgenes). Finally, RT-PCR and lncRNA-mRNA regulatory network was performed to verify the expressions of lncRNAs and mRNAs related to the occurrence and development of DD. 28 lncRNAs, 107 circRNAs, and 89 mRNAs were identified in DD differential expression profiles. GO and pathway analysis found that 20 biological process (BP) related entities and 20 pathways associated with DD. The analysis shows that the genes that are differentially expressed in the DD group involved in the development of the neuropsychiatric system, immunity, and inflammation. Then, we screening for the important DElncRNA and mRNA associated with DD were verified by RT-PCR experiments and the results of RT-PCR were consistent with the sequencing results. LncRNA, circRNA, and mRNA differential expression profiles exist in DD patients compared with T2DM. The lncRNA-mRNA regulatory network analysis confirmed the crosslinking and complex regulation patterns of lncRNA and mRNA expression and verified the authenticity of the regulatory network.
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An et al. identified 75 upregulated and 32 downregulated circRNAs in T2DM patients with depression compared with T2DM patients without depression.
“An et al. identified 75 upregulated and 32 downregulated circRNAs in T2DM patients with depression compared with T2DM patients without depression.”
From Circular RNAs in depression: Biogenesis, function, expression, and therapeutic potential (2021) · cites this paper as [82]
circTFRC and circTNIK were significantly upregulated in the depression group, suggesting that the function of TFRC and TNIK may be related to the pathogenesis of depression.
“Circular TFRC (circTFRC) and circular TNIK (circTNIK) were significantly upregulated in the depression group, suggesting that the function of TFRC and TNIK may be related to the pathogenesis of depression [82].”
From Circular RNAs in depression: Biogenesis, function, expression, and therapeutic potential (2021) · cites this paper as [82]
hsa_circ_0002387 (TNIK) is upregulated in human blood.
“| 25 | hsa_circ_0002387 | TNIK | Human | √ | | Blood | [82] |”
From Circular RNAs in depression: Biogenesis, function, expression, and therapeutic potential (2021) · cites this paper as [82]
chr3:195781950-195782172 (TFRC) is upregulated in human blood.
“| 24 | chr3:195781950- | TFRC | Human | √ | | Blood | [82] |”
From Circular RNAs in depression: Biogenesis, function, expression, and therapeutic potential (2021) · cites this paper as [82]
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Circular RNAs in depression: Biogenesis, function, expression, and therapeutic potential
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- Authors
- An, T., Zhang, J., Ma, Y., Lian, J., Wu, Y.-X., Lv, B.-H., Ma, M.-H., Meng, J.-H., Zhou, Y.-T., Zhang, Z.-Y., Liu, Q., Gao, S.-H., & Jiang, G.-J.
- Affiliations
- Beijing University of Chinese Medicine (CN)
- Corresponding author
- Gao, Si-Hua
- Venue
- Scientific Reports
- Published
- 2019-07-24
- Volume
- 9
- Issue
- 1
- Pages
- 10707-10707
- ISSN
- 2045-2322 (ISSN-L)
- PMC
- PMC6656886
- OpenAlex
- W2963493545
- Cited by
- 27
- References
- 40
- Citations by year
- 2026: 1 · 2025: 1 · 2024: 3 · 2023: 4 · 2022: 3 · 2021: 7 · 2020: 8
- FWCI
- 1.42
- Type
- journal article
- Language
- en
- Open access
- gold
- doi.org
- Locations
- Scientific Reports (publishedVersion, cc-by)
- Europe PMC (PubMed Central) (publishedVersion, cc-by)
- PubMed Central (publishedVersion, cc-by)
- PubMed (publishedVersion)
- DOAJ (DOAJ: Directory of Open Access Journals) (submittedVersion)
- Funders
- National Natural Science Foundation of China (81774171)
- Topics
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › Cancer-related molecular mechanisms research
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Circular RNAs in diseases
- Life Sciences › Biochemistry, Genetics and Molecular Biology › Cancer Research › MicroRNA in disease regulation
- Keywords
- type 2 diabetes, depression, long non-coding RNA, circular RNA, mRNA expression profiling, peripheral blood, lncRNA-mRNA regulatory network, differential gene expression, inflammation, immunity
- MeSH terms
- Aged, Depression, Diabetes Mellitus, Type 2, Female, Humans, Male, Middle Aged, RNA, Messenger, RNA, Untranslated, Gene Regulatory Networks, Transcriptome
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