Cited by 267Mitochondrial Function and PathologyATP Synthase and ATPases ResearchEnzyme Structure and Function

Assembly of mammalian oxidative phosphorylation complexes I–V and supercomplexes

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Signes, Alba, Fernandez-Vizarra, Erika·2018·Essays in Biochemistry

Abstract

The assembly of the five oxidative phosphorylation system (OXPHOS) complexes in the inner mitochondrial membrane is an intricate process. The human enzymes comprise core proteins, performing the catalytic activities, and a large number of ‘supernumerary’ subunits that play essential roles in assembly, regulation and stability. The correct addition of prosthetic groups as well as chaperoning and incorporation of the structural components require a large number of factors, many of which have been found mutated in cases of mitochondrial disease. Nowadays, the mechanisms of assembly for each of the individual complexes are almost completely understood and the knowledge about the assembly factors involved is constantly increasing. On the other hand, it is now well established that complexes I, III and IV interact with each other, forming the so-called respiratory supercomplexes or ‘respirasomes’, although the pathways that lead to their formation are still not completely clear. This review is a summary of our current knowledge concerning the assembly of complexes I–V and of the supercomplexes.

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  • Respiratory complexes consist of 13 subunits encoded by mitochondrial DNA and 78 encoded by nuclear DNA.

    “Respiratory complexes consist of 13 subunits encoded by mitochondrial DNA and 78 encoded by nuclear DNA [80].”

    From Neuronal Apolipoprotein E4 Expression Results in Proteome-Wide Alterations and Compromises Bioenergetic Capacity by Disrupting Mitochondrial Function (2019) · cites this paper as [80]

    The Introduction and the sections on complexes I, III, IV and V describe subunits encoded by mitochondrial and nuclear DNA; their accounts identify seven, one, three and two mitochondrial-encoded subunits, respectively, supporting the total of 13. Our copy does not state a total of 78 nuclear-encoded subunits, so that number is not verified. (LLM, conf=0.82)

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  1. [1]Mai N., Chrzanowska-Lightowlers Z.M. and Lightowlers R.N. (2017) The process of mammalian mitochondrial protein synthesis. Cell Tissue Res. 367, 5– 20 10.1007/s00441-016-2456-0 27411691 PMC5203842 · DOI
  2. [2]Wasilewski M., Chojnacka K. and Chacinska A. (2017) Protein trafficking at the crossroads to mitochondria. Biochim. Biophys. Acta 1864, 125– 137 10.1016/j.bbamcr.2016.10.019 27810356 · DOI
  3. [3]Tzagoloff A. and Dieckmann C.L. (1990) PET genes of Saccharomyces cerevisiae. Microbiol. Rev. 54, 211– 225 2215420 PMC372773
  4. [4]Barrientos A. (2003) Yeast models of human mitochondrial diseases. IUBMB Life 55, 83– 95 10.1002/tbmb.718540876 12749690 · DOI
  5. [5]Fontanesi F., Soto I.C., Horn D. and Barrientos A. (2006) Assembly of mitochondrial cytochrome c-oxidase, a complicated and highly regulated cellular process. Am. J. Physiol. Cell Physiol. 291, C1129– C47 10.1152/ajpcell.00233.2006 16760263 · DOI
  6. [6]Smith P.M., Fox J.L. and Winge D.R. (2012) Biogenesis of the cytochrome bc(1) complex and role of assembly factors. Biochim. Biophys. Acta 1817, 276– 286 10.1016/j.bbabio.2011.11.009 22138626 PMC3366459 · DOI
  7. [7]Van Vranken J.G., Na U., Winge D.R. and Rutter J. (2015) Protein-mediated assembly of succinate dehydrogenase and its cofactors. Crit. Rev. Biochem. Mol. Biol. 50, 168– 180 10.3109/10409238.2014.990556 25488574 PMC4653115 · DOI
  8. [8]Kerscher S., Drose S., Zwicker K., Zickermann V. and Brandt U. (2002) Yarrowia lipolytica, a yeast genetic system to study mitochondrial complex I. Biochim. Biophys. Acta 1555, 83– 91 10.1016/S0005-2728(02)00259-1 12206896 · DOI
  9. [9]Schulte U. (2001) Biogenesis of respiratory complex I. J. Bioenerg. Biomembr. 33, 205– 212 10.1023/A:1010730919074 11695830 · DOI
  10. [10]Fernandez-Vizarra E., Tiranti V. and Zeviani M. (2009) Assembly of the oxidative phosphorylation system in humans: what we have learned by studying its defects. Biochim. Biophys. Acta 1793, 200– 211 10.1016/j.bbamcr.2008.05.028 18620006 · DOI · Paper page
  11. [11]Schagger H. (2002) Respiratory chain supercomplexes of mitochondria and bacteria. Biochim. Biophys. Acta 1555, 154– 159 10.1016/S0005-2728(02)00271-2 12206908 · DOI
  12. [12]Acin-Perez R., Fernandez-Silva P., Peleato M.L., Perez-Martos A. and Enriquez J.A. (2008) Respiratory active mitochondrial supercomplexes. Mol. Cell 32, 529– 539 10.1016/j.molcel.2008.10.021 19026783 · DOI · Paper page
  13. [13]Letts J.A. and Sazanov L.A. (2017) Clarifying the supercomplex: the higher-order organization of the mitochondrial electron transport chain. Nat. Struct. Mol. Biol. 24, 800– 808 10.1038/nsmb.3460 28981073 · DOI
  14. [14]Barrientos A. and Ugalde C. (2013) I function, therefore i am: overcoming skepticism about mitochondrial supercomplexes. Cell Metab. 18, 147– 149 10.1016/j.cmet.2013.07.010 23931749 PMC3912836 · DOI
  15. [15]Acin-Perez R. and Enriquez J.A. (2014) The function of the respiratory supercomplexes: the plasticity model. Biochim. Biophys. Acta 1837, 444– 450 10.1016/j.bbabio.2013.12.009 24368156 · DOI
  16. [16]Moreno-Loshuertos R. and Enriquez J.A. (2016) Respiratory supercomplexes and the functional segmentation of the CoQ pool. Free Radic. Biol. Med. 100, 5– 13 10.1016/j.freeradbiomed.2016.04.018 27105951 · DOI
  17. [17]Lobo-Jarne T. and Ugalde C. (2018) Respiratory chain supercomplexes: structures, function and biogenesis. Semin. Cell Dev. Biol., 76, 179– 190, 10.1016/j.semcdb.2017.07.021 28743641 PMC5780262 · DOI
  18. [18]Milenkovic D., Blaza J.N., Larsson N.G. and Hirst J. (2017) The enigma of the respiratory chain supercomplex. Cell Metab. 25, 765– 776 10.1016/j.cmet.2017.03.009 28380371 · DOI
  19. [19]Efremov R.G., Baradaran R. and Sazanov L.A. (2010) The architecture of respiratory complex I. Nature 465, 441– 445 10.1038/nature09066 20505720 · DOI
  20. [20]Baradaran R., Berrisford J.M., Minhas G.S. and Sazanov L.A. (2013) Crystal structure of the entire respiratory complex I. Nature 494, 443– 448 10.1038/nature11871 23417064 PMC3672946 · DOI · Paper page
  21. [21]Hirst J. and Roessler M.M. (2016) Energy conversion, redox catalysis and generation of reactive oxygen species by respiratory complex I. Biochim. Biophys. Acta 1857, 872– 883 10.1016/j.bbabio.2015.12.009 26721206 PMC4893023 · DOI
  22. [22]Vinothkumar K.R., Zhu J. and Hirst J. (2014) Architecture of mammalian respiratory complex I. Nature 515, 80– 84 10.1038/nature13686 25209663 PMC4224586 · DOI
  23. [23]Zhu J., Vinothkumar K.R. and Hirst J. (2016) Structure of mammalian respiratory complex I. Nature 536, 354– 358 10.1038/nature19095 27509854 PMC5027920 · DOI
  24. [24]Stroud D.A., Surgenor E.E., Formosa L.E., Reljic B., Frazier A.E., Dibley M.G. (2016) Accessory subunits are integral for assembly and function of human mitochondrial complex I. Nature 538, 123– 126 10.1038/nature19754 27626371 · DOI
  25. [25]Antonicka H., Ogilvie I., Taivassalo T., Anitori R.P., Haller R.G., Vissing J. (2003) Identification and characterization of a common set of complex I assembly intermediates in mitochondria from patients with complex I deficiency. J. Biol. Chem. 278, 43081– 43088 10.1074/jbc.M304998200 12941961 · DOI
  26. [26]Ugalde C., Janssen R.J., van den Heuvel L.P., Smeitink J.A. and Nijtmans L.G. (2004) Differences in assembly or stability of complex I and other mitochondrial OXPHOS complexes in inherited complex I deficiency. Hum. Mol. Genet. 13, 659– 667 10.1093/hmg/ddh071 14749350 · DOI
  27. [27]Ugalde C., Vogel R., Huijbens R., van den Heuvel B., Smeitink J. and Nijtmans L. (2004) Human mitochondrial complex I assembles through the combination of evolutionary conserved modules: a framework to interpret complex I deficiencies. Hum. Mol. Genet. 13, 2461– 2472 10.1093/hmg/ddh262 15317750 · DOI
  28. [28]Vogel R.O., Dieteren C.E., van den Heuvel L.P., Willems P.H., Smeitink J.A., Koopman W.J. (2007) Identification of mitochondrial complex I assembly intermediates by tracing tagged NDUFS3 demonstrates the entry point of mitochondrial subunits. J. Biol. Chem. 282, 7582– 7590 10.1074/jbc.M609410200 17209039 · DOI
  29. [29]Vogel R.O., Smeitink J.A. and Nijtmans L.G. (2007) Human mitochondrial complex I assembly: A dynamic and versatile process. Biochim. Biophys. Acta 1767, 1215– 1227 10.1016/j.bbabio.2007.07.008 17854760 · DOI
  30. [30]Lazarou M., McKenzie M., Ohtake A., Thorburn D.R. and Ryan M.T. (2007) Analysis of the assembly profiles for mitochondrial- and nuclear-DNA-encoded subunits into complex I. Mol. Cell Biol. 27, 4228– 4237 10.1128/MCB.00074-07 17438127 PMC1900046 · DOI
  31. [31]Lazarou M., Thorburn D.R., Ryan M.T. and McKenzie M. (2009) Assembly of mitochondrial complex I and defects in disease. Biochim. Biophys. Acta 1793, 78– 88 10.1016/j.bbamcr.2008.04.015 18501715 · DOI
  32. [32]Mimaki M., Wang X., McKenzie M., Thorburn D.R. and Ryan M.T. (2012) Understanding mitochondrial complex I assembly in health and disease. Biochim. Biophys. Acta 1817, 851– 862 10.1016/j.bbabio.2011.08.010 21924235 · DOI · Paper page
  33. [33]Sanchez-Caballero L., Guerrero-Castillo S. and Nijtmans L. (2016) Unraveling the complexity of mitochondrial complex I assembly: a dynamic process. Biochim. Biophys. Acta 1857, 980– 990 10.1016/j.bbabio.2016.03.031 27040506 · DOI
  34. [34]Guerrero-Castillo S., Baertling F., Kownatzki D., Wessels H.J., Arnold S., Brandt U. (2017) The assembly pathway of mitochondrial respiratory chain complex I. Cell Metab. 25, 128– 139 10.1016/j.cmet.2016.09.002 27720676 · DOI
  35. [35]Vogel R.O., van den Brand M.A., Rodenburg R.J., van den Heuvel L.P., Tsuneoka M., Smeitink J.A. (2007) Investigation of the complex I assembly chaperones B17.2L and NDUFAF1 in a cohort of CI deficient patients. Mol. Genet. Metab. 91, 176– 182 10.1016/j.ymgme.2007.02.007 17383918 · DOI
  36. [36]Saada A., Edvardson S., Rapoport M., Shaag A., Amry K., Miller C. (2008) C6ORF66 is an assembly factor of mitochondrial complex I. Am. J. Hum. Genet. 82, 32– 38 10.1016/j.ajhg.2007.08.003 18179882 PMC2253982 · DOI
  37. [37]Saada A., Vogel R.O., Hoefs S.J., van den Brand M.A., Wessels H.J., Willems P.H. (2009) Mutations in NDUFAF3 (C3ORF60), encoding an NDUFAF4 (C6ORF66)-interacting complex I assembly protein, cause fatal neonatal mitochondrial disease. Am. J. Hum. Genet. 84, 718– 727 10.1016/j.ajhg.2009.04.020 19463981 PMC2694978 · DOI
  38. [38]Pagliarini D.J., Calvo S.E., Chang B., Sheth S.A., Vafai S.B., Ong S.E. (2008) A mitochondrial protein compendium elucidates complex I disease biology. Cell 134, 112– 123 10.1016/j.cell.2008.06.016 18614015 PMC2778844 · DOI · Paper page
  39. [39]Bianciardi L., Imperatore V., Fernandez-Vizarra E., Lopomo A., Falabella M., Furini S. (2016) Exome sequencing coupled with mRNA analysis identifies NDUFAF6 as a Leigh gene. Mol. Genet. Metab., 10.1016/j.ymgme.2016.09.001 27623250 · DOI
  40. [40]McKenzie M., Tucker E.J., Compton A.G., Lazarou M., George C., Thorburn D.R. (2011) Mutations in the gene encoding C8orf38 block complex i assembly by inhibiting production of the mitochondria-encoded subunit ND1. J. Mol. Biol. 414, 413– 426 10.1016/j.jmb.2011.10.012 22019594 · DOI
  41. [41]Zurita Rendon O. and Shoubridge E.A. (2012) Early complex I assembly defects result in rapid turnover of the ND1 subunit. Hum. Mol. Genet. 21, 3815– 3824 10.1093/hmg/dds209 22653752 PMC3412381 · DOI
  42. [42]Rhein V.F., Carroll J., Ding S., Fearnley I.M. and Walker J.E. (2016) NDUFAF5 hydroxylates NDUFS7 at an early stage in the assembly of human complex I. J. Biol. Chem. 291, 14851– 14860 10.1074/jbc.M116.734970 27226634 PMC4938201 · DOI
  43. [43]Rhein V.F., Carroll J., Ding S., Fearnley I.M. and Walker J.E. (2013) NDUFAF7 methylates arginine 85 in the NDUFS2 subunit of human complex I. J. Biol. Chem. 288, 33016– 33026 10.1074/jbc.M113.518803 24089531 PMC3829151 · DOI
  44. [44]Zurita Rendon O., Silva Neiva L., Sasarman F. and Shoubridge E.A. (2014) The arginine methyltransferase NDUFAF7 is essential for complex I assembly and early vertebrate embryogenesis. Hum. Mol. Genet. 23, 5159– 5170 10.1093/hmg/ddu239 24838397 PMC4159157 · DOI
  45. [45]Sheftel A.D., Stehling O., Pierik A.J., Netz D.J., Kerscher S., Elsasser H.P. (2009) Human ind1, an iron-sulfur cluster assembly factor for respiratory complex I. Mol. Cell. Biol. 29, 6059– 6073 10.1128/MCB.00817-09 19752196 PMC2772561 · DOI
  46. [46]Calvo S.E., Tucker E.J., Compton A.G., Kirby D.M., Crawford G., Burtt N.P. (2010) High-throughput, pooled sequencing identifies mutations in NUBPL and FOXRED1 in human complex I deficiency. Nat. Genet. 42, 851– 858 10.1038/ng.659 20818383 PMC2977978 · DOI
  47. [47]Andrews B., Carroll J., Ding S., Fearnley I.M. and Walker J.E. (2013) Assembly factors for the membrane arm of human complex I. Proc. Natl. Acad. Sci. U.S.A. 110, 18934– 18939 10.1073/pnas.1319247110 24191001 PMC3839705 · DOI
  48. [48]Guarani V., Paulo J., Zhai B., Huttlin E.L., Gygi S.P. and Harper J.W. (2014) TIMMDC1/C3orf1 functions as a membrane-embedded mitochondrial complex I assembly factor through association with the MCIA complex. Mol. Cell. Biol. 34, 847– 861 10.1128/MCB.01551-13 24344204 PMC4023825 · DOI
  49. [49]Vogel R.O., Janssen R.J., Ugalde C., Grovenstein M., Huijbens R.J., Visch H.J. (2005) Human mitochondrial complex I assembly is mediated by NDUFAF1. FEBS J. 272, 5317– 5326 10.1111/j.1742-4658.2005.04928.x 16218961 · DOI
  50. [50]Dunning C.J., McKenzie M., Sugiana C., Lazarou M., Silke J., Connelly A. (2007) Human CIA30 is involved in the early assembly of mitochondrial complex I and mutations in its gene cause disease. EMBO J. 26, 3227– 3237 10.1038/sj.emboj.7601748 17557076 PMC1914096 · DOI
  51. [51]Vogel R.O., Janssen R.J., van den Brand M.A., Dieteren C.E., Verkaart S., Koopman W.J. (2007) Cytosolic signaling protein Ecsit also localizes to mitochondria where it interacts with chaperone NDUFAF1 and functions in complex I assembly. Genes Dev. 21, 615– 624 10.1101/gad.408407 17344420 PMC1820902 · DOI
  52. [52]Nouws J., Nijtmans L., Houten S.M., van den Brand M., Huynen M., Venselaar H. (2010) Acyl-CoA dehydrogenase 9 is required for the biogenesis of oxidative phosphorylation complex I. Cell Metab. 12, 283– 294 10.1016/j.cmet.2010.08.002 20816094 · DOI
  53. [53]Haack T.B., Danhauser K., Haberberger B., Hoser J., Strecker V., Boehm D. (2010) Exome sequencing identifies ACAD9 mutations as a cause of complex I deficiency. Nat. Genet. 42, 1131– 1134 10.1038/ng.706 21057504 · DOI
  54. [54]Heide H., Bleier L., Steger M., Ackermann J., Drose S., Schwamb B. (2012) Complexome profiling identifies TMEM126B as a component of the mitochondrial complex I assembly complex. Cell Metab. 16, 538– 549 10.1016/j.cmet.2012.08.009 22982022 · DOI
  55. [55]Szklarczyk R., Wanschers B.F., Cuypers T.D., Esseling J.J., Riemersma M., van den Brand M.A. (2012) Iterative orthology prediction uncovers new mitochondrial proteins and identifies C12orf62 as the human ortholog of COX14, a protein involved in the assembly of cytochrome c oxidase. Genome Biol. 13, R12 10.1186/gb-2012-13-2-r12 22356826 PMC3334569 · DOI
  56. [56]Mick D.U., Dennerlein S., Wiese H., Reinhold R., Pacheu-Grau D., Lorenzi I. (2012) MITRAC links mitochondrial protein translocation to respiratory-chain assembly and translational regulation. Cell 151, 1528– 1541 10.1016/j.cell.2012.11.053 23260140 · DOI · Paper page
  57. [57]Fassone E., Duncan A.J., Taanman J.W., Pagnamenta A.T., Sadowski M.I., Holand T. (2010) FOXRED1, encoding an FAD-dependent oxidoreductase complex-I-specific molecular chaperone, is mutated in infantile-onset mitochondrial encephalopathy. Hum. Mol. Genet. 19, 4837– 4847 10.1093/hmg/ddq414 20858599 PMC4560042 · DOI
  58. [58]Formosa L.E., Mimaki M., Frazier A.E., McKenzie M., Stait T.L., Thorburn D.R. (2015) Characterization of mitochondrial FOXRED1 in the assembly of respiratory chain complex I. Hum. Mol. Genet. 24, 2952– 2965 10.1093/hmg/ddv058 25678554 · DOI
  59. [59]Zurita Rendon O., Antonicka H., Horvath R. and Shoubridge E.A. (2016) A mutation in the FAD-dependent oxidoreductase FOXRED1 results in cell-type specific assembly defects in oxidative phosphorylation complexes I and II. Mol. Cell. Biol., 10.1128/MCB.00066-16 27215383 PMC4968213 · DOI
  60. [60]Cizkova A., Stranecky V., Mayr J.A., Tesarova M., Havlickova V., Paul J. (2008) TMEM70 mutations cause isolated ATP synthase deficiency and neonatal mitochondrial encephalocardiomyopathy. Nat. Genet. 40, 1288– 1290 10.1038/ng.246 18953340 · DOI
  61. [61]Hejzlarova K., Mracek T., Vrbacky M., Kaplanova V., Karbanova V., Nuskova H. (2014) Nuclear genetic defects of mitochondrial ATP synthase. Physiol. Res. 63, S57– S71 24564666
  62. [62]Ogilvie I., Kennaway N.G. and Shoubridge E.A. (2005) A molecular chaperone for mitochondrial complex I assembly is mutated in a progressive encephalopathy. J. Clin. Invest. 115, 2784– 2792 10.1172/JCI26020 16200211 PMC1236688 · DOI
  63. [63]Oyedotun K.S. and Lemire B.D. (2001) The quinone-binding sites of the Saccharomyces cervisiae succinate-ubiquinone oxidoreductase. J. Biol. Chem. 276, 16936– 16943 10.1074/jbc.M100184200 11279023 · DOI
  64. [65]Sun F., Huo X., Zhai Y., Wang A., Xu J., Su D. (2005) Crystal structure of mitochondrial respiratory membrane protein complex II. Cell 121, 1043– 1057 10.1016/j.cell.2005.05.025 15989954 · DOI · Paper page
  65. [66]Oyedotun K.S., Sit C.S. and Lemire B.D. (2007) The Saccharomyces cerevisiae succinate dehydrogenase does not require heme for ubiquinone reduction. Biochim. Biophys. Acta 1767, 1436– 1445 10.1016/j.bbabio.2007.09.008 18028869 · DOI
  66. [68]Kim H.J., Jeong M.Y., Na U. and Winge D.R. (2012) Flavinylation and assembly of succinate dehydrogenase are dependent on the C-terminal tail of the flavoprotein subunit. J. Biol. Chem. 287, 40670– 40679 10.1074/jbc.M112.405704 23043141 PMC3504780 · DOI
  67. [69]Van Vranken J.G., Bricker D.K., Dephoure N., Gygi S.P., Cox J.E., Thummel C.S. (2014) SDHAF4 promotes mitochondrial succinate dehydrogenase activity and prevents neurodegeneration. Cell Metab 20, 241– 252 10.1016/j.cmet.2014.05.012 24954416 PMC4126880 · DOI
  68. [71]Rouault T.A. and Maio N. (2017) Biogenesis and functions of mammalian iron-sulfur proteins in the regulation of iron homeostasis and pivotal metabolic pathways. J. Biol. Chem. 292, 12744– 12753 10.1074/jbc.R117.789537 28615439 PMC5546015 · DOI
  69. [72]Ghezzi D., Goffrini P., Uziel G., Horvath R., Klopstock T., Lochmuller H. (2009) SDHAF1, encoding a LYR complex-II specific assembly factor, is mutated in SDH-defective infantile leukoencephalopathy. Nat. Genet. 41, 654– 656 10.1038/ng.378 19465911 · DOI
  70. [73]Maio N., Singh A., Uhrigshardt H., Saxena N., Tong W.H. and Rouault T.A. (2014) Cochaperone binding to LYR motifs confers specificity of iron sulfur cluster delivery. Cell Metab. 19, 445– 457 10.1016/j.cmet.2014.01.015 24606901 PMC6550293 · DOI
  71. [74]Maio N., Ghezzi D., Verrigni D., Rizza T., Bertini E., Martinelli D. (2016) Disease-Causing SDHAF1 Mutations Impair Transfer of Fe-S Clusters to SDHB. Cell Metab. 23, 292– 302 10.1016/j.cmet.2015.12.005 26749241 PMC4749439 · DOI
  72. [75]Na U., Yu W., Cox J., Bricker D.K., Brockmann K., Rutter J. (2014) The LYR factors SDHAF1 and SDHAF3 mediate maturation of the iron-sulfur subunit of succinate dehydrogenase. Cell Metab. 20, 253– 266 10.1016/j.cmet.2014.05.014 24954417 PMC4126850 · DOI
  73. [76]Dwight T., Na U., Kim E., Zhu Y., Richardson A.L., Robinson B.G. (2017) Analysis of SDHAF3 in familial and sporadic pheochromocytoma and paraganglioma. BMC Cancer 17, 497 10.1186/s12885-017-3486-z 28738844 PMC5525311 · DOI
  74. [77]Lemarie A. and Grimm S. (2009) Mutations in the heme b-binding residue of SDHC inhibit assembly of respiratory chain complex II in mammalian cells. Mitochondrion 9, 254– 260 10.1016/j.mito.2009.03.004 19332149 · DOI
  75. [78]Kim H.J., Khalimonchuk O., Smith P.M. and Winge D.R. (2012) Structure, function, and assembly of heme centers in mitochondrial respiratory complexes. Biochim. Biophys. Acta 1823, 1604– 1616 10.1016/j.bbamcr.2012.04.008 22554985 PMC3601904 · DOI
  76. [79]Trumpower B.L. (1990) The protonmotive Q cycle. Energy transduction by coupling of proton translocation to electron transfer by the cytochrome bc1 complex. J. Biol. Chem. 265, 11409– 11412 2164001
  77. [80]Crofts A.R., Holland J.T., Victoria D., Kolling D.R., Dikanov S.A., Gilbreth R. (2008) The Q-cycle reviewed: How well does a monomeric mechanism of the bc(1) complex account for the function of a dimeric complex? Biochim. Biophys. Acta 1777, 1001– 1019 10.1016/j.bbabio.2008.04.037 18501698 PMC2578832 · DOI
  78. [81]Iwata S., Lee J.W., Okada K., Lee J.K., Iwata M., Rasmussen B. (1998) Complete structure of the 11-subunit bovine mitochondrial cytochrome bc1 complex. Science 281, 64– 71 10.1126/science.281.5373.64 9651245 · DOI · Paper page
  79. [82]Hunte C., Koepke J., Lange C., Rossmanith T. and Michel H. (2000) Structure at 2.3 A resolution of the cytochrome bc(1) complex from the yeast Saccharomyces cerevisiae co-crystallized with an antibody Fv fragment. Structure 8, 669– 684 10.1016/S0969-2126(00)00152-0 10873857 · DOI
  80. [83]Brandt U., Yu L., Yu C.A. and Trumpower B.L. (1993) The mitochondrial targeting presequence of the Rieske iron-sulfur protein is processed in a single step after insertion into the cytochrome bc1 complex in mammals and retained as a subunit in the complex. J. Biol. Chem. 268, 8387– 8390 8386158
  81. [84]Bottani E., Cerutti R., Harbour M.E., Ravaglia S., Dogan S.A., Giordano C. (2017) TTC19 plays a husbandry role on UQCRFS1 turnover in the biogenesis of mitochondrial respiratory complex III. Mol. Cell. 67, 96.e4– 105.e4 10.1016/j.molcel.2017.06.001 28673544 · DOI
  82. [85]Fernandez-Vizarra E. and Zeviani M. (2018) Mitochondrial complex III Rieske Fe-S protein processing and assembly. Cell Cycle 17, 681– 687, 10.1080/15384101.2017. 29243944 PMC5969560 · DOI
  83. [86]Haut S., Brivet M., Touati G., Rustin P., Lebon S., Garcia-Cazorla A. (2003) A deletion in the human QP-C gene causes a complex III deficiency resulting in hypoglycaemia and lactic acidosis. Hum. Genet. 113, 118– 122 12709789
  84. [87]Barel O., Shorer Z., Flusser H., Ofir R., Narkis G., Finer G. (2008) Mitochondrial complex III deficiency associated with a homozygous mutation in UQCRQ. Am. J. Hum. Genet. 82, 1211– 1216 10.1016/j.ajhg.2008.03.020 18439546 PMC2427202 · DOI
  85. [88]Gruschke S., Kehrein K., Rompler K., Grone K., Israel L., Imhof A. (2011) Cbp3-Cbp6 interacts with the yeast mitochondrial ribosomal tunnel exit and promotes cytochrome b synthesis and assembly. J. Cell Biol. 193, 1101– 1114 10.1083/jcb.201103132 21670217 PMC3115798 · DOI
  86. [89]Gruschke S., Rompler K., Hildenbeutel M., Kehrein K., Kuhl I., Bonnefoy N. (2012) The Cbp3-Cbp6 complex coordinates cytochrome b synthesis with bc(1) complex assembly in yeast mitochondria. J. Cell Biol. 199, 137– 150 10.1083/jcb.201206040 23007649 PMC3461508 · DOI
  87. [90]Hildenbeutel M., Hegg E.L., Stephan K., Gruschke S., Meunier B. and Ott M. (2014) Assembly factors monitor sequential hemylation of cytochrome b to regulate mitochondrial translation. J. Cell Biol. 205, 511– 524 10.1083/jcb.201401009 24841564 PMC4033779 · DOI
  88. [91]Tucker E.J., Wanschers B.F., Szklarczyk R., Mountford H.S., Wijeyeratne X.W., van den Brand M.A. (2013) Mutations in the UQCC1-interacting protein, UQCC2, cause human complex III deficiency associated with perturbed cytochrome b protein expression. PLoS Genet. 9, e1004034 10.1371/journal.pgen.1004034 24385928 PMC3873243 · DOI
  89. [92]Wanschers B.F., Szklarczyk R., van den Brand M.A., Jonckheere A., Suijskens J., Smeets R. (2014) A mutation in the human CBP4 ortholog UQCC3 impairs complex III assembly, activity and cytochrome b stability. Hum. Mol. Genet. 23, 6356– 6365 10.1093/hmg/ddu357 25008109 · DOI
  90. [93]Cruciat C.M., Hell K., Folsch H., Neupert W. and Stuart R.A. (1999) Bcs1p, an AAA-family member, is a chaperone for the assembly of the cytochrome bc(1) complex. EMBO J. 18, 5226– 5233 10.1093/emboj/18.19.5226 10508156 PMC1171593 · DOI
  91. [94]Fernandez-Vizarra E., Bugiani M., Goffrini P., Carrara F., Farina L., Procopio E. (2007) Impaired complex III assembly associated with BCS1L gene mutations in isolated mitochondrial encephalopathy. Hum. Mol. Genet. 16, 1241– 1252 10.1093/hmg/ddm072 17403714 · DOI
  92. [95]Conte A., Papa B., Ferramosca A. and Zara V. (2015) The dimerization of the yeast cytochrome bc1 complex is an early event and is independent of Rip1. Biochim. Biophys. Acta 1853, 987– 995 10.1016/j.bbamcr.2015.02.006 25683140 · DOI
  93. [96]Atkinson A., Smith P., Fox J.L., Cui T.Z., Khalimonchuk O. and Winge D.R. (2011) The LYR protein Mzm1 functions in the insertion of the Rieske Fe/S protein in yeast mitochondria. Mol. Cell. Biol. 31, 3988– 3996 10.1128/MCB.05673-11 21807901 PMC3187353 · DOI
  94. [97]Cui T.Z., Smith P.M., Fox J.L., Khalimonchuk O. and Winge D.R. (2012) Late-stage maturation of the Rieske Fe/S protein: Mzm1 stabilizes Rip1 but does not facilitate its translocation by the AAA ATPase Bcs1. Mol. Cell. Biol. 32, 4400– 4409 10.1128/MCB.00441-12 22927643 PMC3486142 · DOI
  95. [98]Sanchez E., Lobo T., Fox J.L., Zeviani M., Winge D.R. and Fernandez-Vizarra E. (2013) LYRM7/MZM1L is a UQCRFS1 chaperone involved in the last steps of mitochondrial Complex III assembly in human cells. Biochim. Biophys. Acta 1827, 285– 293 10.1016/j.bbabio.2012.11.003 23168492 PMC3570683 · DOI
  96. [99]Maio N., Kim K.S., Singh A. and Rouault T.A. (2017) A single adaptable Cochaperone-Scaffold complex delivers nascent iron-sulfur clusters to mammalian respiratory chain complexes I-III. Cell Metab. 25, 945e6– 953e6 10.1016/j.cmet.2017.03.010 28380382 PMC12285277 · DOI
  97. [100]de Lonlay P., Valnot I., Barrientos A., Gorbatyuk M., Tzagoloff A., Taanman J.W. (2001) A mutant mitochondrial respiratory chain assembly protein causes complex III deficiency in patients with tubulopathy, encephalopathy and liver failure. Nat. Genet. 29, 57– 60 10.1038/ng706 11528392 · DOI
  98. [101]Wagener N., Ackermann M., Funes S. and Neupert W. (2011) A pathway of protein translocation in mitochondria mediated by the AAA-ATPase Bcs1. Mol. Cell 44, 191– 202 10.1016/j.molcel.2011.07.036 22017868 · DOI
  99. [102]Ghezzi D., Arzuffi P., Zordan M., Da Re C., Lamperti C., Benna C. (2011) Mutations in TTC19 cause mitochondrial complex III deficiency and neurological impairment in humans and flies. Nat. Genet. 43, 259– 263 10.1038/ng.761 21278747 · DOI
  100. [103]Fernandez-Vizarra E. and Zeviani M. (2015) Nuclear gene mutations as the cause of mitochondrial complex III deficiency. Front. Genet. 6, 134 10.3389/fgene.2015.00134 25914718 PMC4391031 · DOI
  101. [104]Zara V., Palmisano I., Conte L. and Trumpower B.L. (2004) Further insights into the assembly of the yeast cytochrome bc1 complex based on analysis of single and double deletion mutants lacking supernumerary subunits and cytochrome b. Eur. J. Biochem. 271, 1209– 1218 10.1111/j.1432-1033.2004.04024.x 15009199 · DOI
  102. [105]Zara V., Conte L. and Trumpower B.L. (2007) Identification and characterization of cytochrome bc(1) subcomplexes in mitochondria from yeast with single and double deletions of genes encoding cytochrome bc(1) subunits. FEBS J. 274, 4526– 4539 10.1111/j.1742-4658.2007.05982.x 17680808 · DOI
  103. [106]Zara V., Conte L. and Trumpower B.L. (2009) Evidence that the assembly of the yeast cytochrome bc1 complex involves the formation of a large core structure in the inner mitochondrial membrane. FEBS J. 276, 1900– 1914 10.1111/j.1742-4658.2009.06916.x 19236481 PMC2745923 · DOI
  104. [107]Zara V., Conte L. and Trumpower B.L. (2009) Biogenesis of the yeast cytochrome bc1 complex. Biochim. Biophys. Acta 1793, 89– 96 10.1016/j.bbamcr.2008.04.011 18501197 · DOI
  105. [108]Wikstrom M., Krab K. and Sharma V. (2018) Oxygen activation and energy conservation by cytochrome c oxidase. Chem. Rev. 10.1021/acs.chemrev.7b00664 29350917 PMC6203177 · DOI
  106. [109]Yoshikawa S., Shinzawa-Itoh K. and Tsukihara T. (1998) Crystal structure of bovine heart cytochrome c oxidase at 2.8 A resolution. J. Bioenerg. Biomembr. 30, 7– 14 10.1023/A:1020595108560 9623800 · DOI
  107. [110]Balsa E., Marco R., Perales-Clemente E., Szklarczyk R., Calvo E., Landazuri M.O. (2012) NDUFA4 is a subunit of complex IV of the mammalian electron transport chain. Cell Metab. 16, 378– 386 10.1016/j.cmet.2012.07.015 22902835 · DOI
  108. [111]Kadenbach B. (2017) Regulation of mammalian 13-subunit cytochrome c oxidase and binding of other proteins: role of NDUFA4. Trends Endocrinol. Metab. 28, 761– 770 10.1016/j.tem.2017.09.003 28988874 · DOI
  109. [112]Arnold S., Goglia F. and Kadenbach B. (1998) 3,5-Diiodothyronine binds to subunit Va of cytochrome-c oxidase and abolishes the allosteric inhibition of respiration by ATP. Eur. J. Biochem. 252, 325– 330 10.1046/j.1432-1327.1998.2520325.x 9523704 · DOI
  110. [113]Arnold S. and Kadenbach B. (1997) Cell respiration is controlled by ATP, an allosteric inhibitor of cytochrome-c oxidase. Eur. J. Biochem. 249, 350– 354 10.1111/j.1432-1033.1997.t01-1-00350.x 9363790 · DOI
  111. [114]Kadenbach B. and Arnold S. (1999) A second mechanism of respiratory control. FEBS Lett. 447, 131– 134 10.1016/S0014-5793(99)00229-X 10214932 · DOI
  112. [115]Massa V., Fernandez-Vizarra E., Alshahwan S., Bakhsh E., Goffrini P., Ferrero I. (2008) Severe infantile encephalomyopathy caused by a mutation in COX6B1, a nucleus-encoded subunit of cytochrome c oxidase. Am. J. Hum. Genet. 82, 1281– 1289 10.1016/j.ajhg.2008.05.002 18499082 PMC2427282 · DOI
  113. [116]Fornuskova D., Stiburek L., Wenchich L., Vinsova K., Hansikova H. and Zeman J. (2010) Novel insights into the assembly and function of human nuclear-encoded cytochrome c oxidase subunits 4, 5a, 6a, 7a and 7b. Biochem. J. 428, 363– 374 10.1042/BJ20091714 20307258 · DOI
  114. [117]Pitceathly R.D., Rahman S., Wedatilake Y., Polke J.M., Cirak S., Foley A.R. (2013) NDUFA4 mutations underlie dysfunction of a cytochrome c oxidase subunit linked to human neurological disease. Cell Rep. 3, 1795– 1805 10.1016/j.celrep.2013.05.005 23746447 PMC3701321 · DOI
  115. [118]Huttemann M., Kadenbach B. and Grossman L.I. (2001) Mammalian subunit IV isoforms of cytochrome c oxidase. Gene 267, 111– 123 10.1016/S0378-1119(01)00385-7 11311561 · DOI
  116. [119]Sinkler C.A., Kalpage H., Shay J., Lee I., Malek M.H., Grossman L.I. (2017) Tissue- and condition-specific isoforms of mammalian cytochrome c oxidase subunits: from function to human disease. Oxid. Med. Cell Longev. 2017, 1534056 10.1155/2017/1534056 28593021 PMC5448071 · DOI
  117. [120]Nijtmans L.G., Taanman J.W., Muijsers A.O., Speijer D. and Van den Bogert C. (1998) Assembly of cytochrome-c oxidase in cultured human cells. Eur. J. Biochem. 254, 389– 394 10.1046/j.1432-1327.1998.2540389.x 9660196 · DOI
  118. [121]Stiburek L., Hansikova H., Tesarova M., Cerna L. and Zeman J. (2006) Biogenesis of eukaryotic cytochrome c oxidase. Physiol. Res. 55 (Suppl. 2), S27– S41 17298220
  119. [122]Stiburek L., Vesela K., Hansikova H., Pecina P., Tesarova M., Cerna L. (2005) Tissue-specific cytochrome c oxidase assembly defects due to mutations in SCO2 and SURF1. Biochem. J. 392, 625– 632 10.1042/BJ20050807 16083427 PMC1316303 · DOI
  120. [123]Vidoni S., Harbour M.E., Guerrero-Castillo S., Signes A., Ding S., Fearnley I.M. (2017) MR-1S interacts with PET100 and PET117 in module-based assembly of human cytochrome c oxidase. Cell Rep. 18, 1727– 1738 10.1016/j.celrep.2017.01.044 28199844 · DOI
  121. [124]Timon-Gomez A., Nyvltova E., Abriata L.A., Vila A.J., Hosler J. and Barrientos A. (2018) Mitochondrial cytochrome c oxidase biogenesis: recent developments. Semin. Cell Dev. Biol. 76, 163– 178, 10.106/j.semcdb.2017.08.055 28870773 PMC5842095
  122. [125]McStay G.P., Su C.H. and Tzagoloff A. (2013) Modular assembly of yeast cytochrome oxidase. Mol. Biol. Cell 24, 440– 452 10.1091/mbc.e12-10-0749 23266989 PMC3571867 · DOI
  123. [126]Hayashi T., Asano Y., Shintani Y., Aoyama H., Kioka H., Tsukamoto O. (2015) Higd1a is a positive regulator of cytochrome c oxidase. Proc. Natl. Acad. Sci. U.S.A. 112, 1553– 1558 10.1073/pnas.1419767112 25605899 PMC4321285 · DOI
  124. [127]Lundin C., von Ballmoos C., Ott M., Adelroth P. and Brzezinski P. (2016) Regulatory role of the respiratory supercomplex factors in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. U.S.A. 113, E4476– E4485 10.1073/pnas.1601196113 27432958 PMC4978307 · DOI
  125. [128]Strogolova V., Furness A., Robb-McGrath M., Garlich J. and Stuart R.A. (2012) Rcf1 and Rcf2, members of the hypoxia-induced gene 1 protein family, are critical components of the mitochondrial cytochrome bc1-cytochrome c oxidase supercomplex. Mol. Cell. Biol. 32, 1363– 1373 10.1128/MCB.06369-11 22310663 PMC3318584 · DOI
  126. [129]Vukotic M., Oeljeklaus S., Wiese S., Vogtle F.N., Meisinger C., Meyer H.E. (2012) Rcf1 mediates cytochrome oxidase assembly and respirasome formation, revealing heterogeneity of the enzyme complex. Cell Metab. 15, 336– 347 10.1016/j.cmet.2012.01.016 22342701 · DOI
  127. [130]Dennerlein S., Oeljeklaus S., Jans D., Hellwig C., Bareth B., Jakobs S. (2015) MITRAC7 acts as a COX1-specific chaperone and reveals a checkpoint during cytochrome c oxidase assembly. Cell Rep. 12, 1644– 1655 10.1016/j.celrep.2015.08.009 26321642 · DOI
  128. [131]Weraarpachai W., Sasarman F., Nishimura T., Antonicka H., Aure K., Rotig A. (2012) Mutations in C12orf62, a factor that couples COX I synthesis with cytochrome c oxidase assembly, cause fatal neonatal lactic acidosis. Am. J. Hum. Genet. 90, 142– 151 10.1016/j.ajhg.2011.11.027 22243966 PMC3257963 · DOI
  129. [132]Clemente P., Peralta S., Cruz-Bermudez A., Echevarria L., Fontanesi F., Barrientos A. (2013) hCOA3 stabilizes cytochrome c oxidase 1 (COX1) and promotes cytochrome c oxidase assembly in human mitochondria. J. Biol. Chem. 288, 8321– 8331 10.1074/jbc.M112.422220 23362268 PMC3605650 · DOI
  130. [134]Bourens M. and Barrientos A. (2017) A CMC1-knockout reveals translation-independent control of human mitochondrial complex IV biogenesis. EMBO Rep. 18, 477– 494 10.15252/embr.201643103 28082314 PMC5331208 · DOI
  131. [135]Mootha V.K., Lepage P., Miller K., Bunkenborg J., Reich M., Hjerrild M. (2003) Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics. Proc. Natl. Acad. Sci. U.S.A. 100, 605– 610 10.1073/pnas.242716699 12529507 PMC141043 · DOI
  132. [136]Xu F., Morin C., Mitchell G., Ackerley C. and Robinson B.H. (2004) The role of the LRPPRC (leucine-rich pentatricopeptide repeat cassette) gene in cytochrome oxidase assembly: mutation causes lowered levels of COX (cytochrome c oxidase) I and COX III mRNA. Biochem. J. 382, 331– 336 10.1042/BJ20040469 15139850 PMC1133946 · DOI
  133. [137]Ruzzenente B., Metodiev M.D., Wredenberg A., Bratic A., Park C.B., Camara Y. (2012) LRPPRC is necessary for polyadenylation and coordination of translation of mitochondrial mRNAs. EMBO J. 31, 443– 456 10.1038/emboj.2011.392 22045337 PMC3261557 · DOI
  134. [138]Weraarpachai W., Antonicka H., Sasarman F., Seeger J., Schrank B., Kolesar J.E. (2009) Mutation in TACO1, encoding a translational activator of COX I, results in cytochrome c oxidase deficiency and late-onset Leigh syndrome. Nat. Genet. 41, 833– 837 10.1038/ng.390 19503089 · DOI
  135. [139]Richman T.R., Spahr H., Ermer J.A., Davies S.M., Viola H.M., Bates K.A. (2016) Loss of the RNA-binding protein TACO1 causes late-onset mitochondrial dysfunction in mice. Nat. Commun. 7, 11884 10.1038/ncomms11884 27319982 PMC4915168 · DOI
  136. [140]Antonicka H., Leary S.C., Guercin G.H., Agar J.N., Horvath R., Kennaway N.G. (2003) Mutations in COX10 result in a defect in mitochondrial heme A biosynthesis and account for multiple, early-onset clinical phenotypes associated with isolated COX deficiency. Hum. Mol. Genet. 12, 2693– 2702 10.1093/hmg/ddg284 12928484 · DOI
  137. [141]Diaz F., Thomas C.K., Garcia S., Hernandez D. and Moraes C.T. (2005) Mice lacking COX10 in skeletal muscle recapitulate the phenotype of progressive mitochondrial myopathies associated with cytochrome c oxidase deficiency. Hum. Mol. Genet. 14, 2737– 2748 10.1093/hmg/ddi307 16103131 PMC2778476 · DOI
  138. [142]Antonicka H., Mattman A., Carlson C.G., Glerum D.M., Hoffbuhr K.C., Leary S.C. (2003) Mutations in COX15 produce a defect in the mitochondrial heme biosynthetic pathway, causing early-onset fatal hypertrophic cardiomyopathy. Am. J. Hum. Genet. 72, 101– 114 10.1086/345489 12474143 PMC378614 · DOI
  139. [143]Tiranti V., Hoertnagel K., Carrozzo R., Galimberti C., Munaro M., Granatiero M. (1998) Mutations of SURF-1 in Leigh disease associated with cytochrome c oxidase deficiency. Am. J. Hum. Genet. 63, 1609– 1621 10.1086/302150 9837813 PMC1377632 · DOI
  140. [144]Zhu Z., Yao J., Johns T., Fu K., De Bie I., Macmillan C. (1998) SURF1, encoding a factor involved in the biogenesis of cytochrome c oxidase, is mutated in Leigh syndrome. Nat. Genet. 20, 337– 343 10.1038/3804 9843204 · DOI
  141. [145]Taylor N.G., Swenson S., Harris N.J., Germany E.M., Fox J.L. and Khalimonchuk O. (2017) The assembly factor Pet117 couples heme a synthase activity to cytochrome oxidase assembly. J. Biol. Chem. 292, 1815– 1825 10.1074/jbc.M116.766980 27998984 PMC5290955 · DOI
  142. [146]Hiser L., Di Valentin M., Hamer A.G. and Hosler J.P. (2000) Cox11p is required for stable formation of the Cu(B) and magnesium centers of cytochrome c oxidase. J. Biol. Chem. 275, 619– 623 10.1074/jbc.275.1.619 10617659 · DOI
  143. [147]Banci L., Bertini I., Cantini F., Ciofi-Baffoni S., Gonnelli L. and Mangani S. (2004) Solution structure of Cox11, a novel type of beta-immunoglobulin-like fold involved in CuB site formation of cytochrome c oxidase. J. Biol. Chem. 279, 34833– 34839 10.1074/jbc.M403655200 15181013 · DOI
  144. [148]Cobine P.A., Pierrel F. and Winge D.R. (2006) Copper trafficking to the mitochondrion and assembly of copper metalloenzymes. Biochim. Biophys. Acta 1763, 759– 772 10.1016/j.bbamcr.2006.03.002 16631971 · DOI
  145. [149]Glerum D.M., Shtanko A. and Tzagoloff A. (1996) Characterization of COX17, a yeast gene involved in copper metabolism and assembly of cytochrome oxidase. J. Biol. Chem. 271, 14504– 14509 10.1074/jbc.271.24.14504 8662933 · DOI
  146. [150]Bode M., Woellhaf M.W., Bohnert M., van der Laan M., Sommer F., Jung M. (2015) Redox-regulated dynamic interplay between Cox19 and the copper-binding protein Cox11 in the intermembrane space of mitochondria facilitates biogenesis of cytochrome c oxidase. Mol. Biol. Cell 26, 2385– 2401 10.1091/mbc.e14-11-1526 25926683 PMC4571295 · DOI
  147. [151]Pierrel F., Bestwick M.L., Cobine P.A., Khalimonchuk O., Cricco J.A. and Winge D.R. (2007) Coa1 links the Mss51 post-translational function to Cox1 cofactor insertion in cytochrome c oxidase assembly. EMBO J. 26, 4335– 4346 10.1038/sj.emboj.7601861 17882260 PMC2034670 · DOI
  148. [152]Bourens M. and Barrientos A. (2017) Human mitochondrial cytochrome c oxidase assembly factor COX18 acts transiently as a membrane insertase within the subunit 2 maturation module. J. Biol. Chem. 292, 7774– 7783 10.1074/jbc.M117.778514 28330871 PMC5427259 · DOI
  149. [153]Szklarczyk R., Wanschers B.F., Nijtmans L.G., Rodenburg R.J., Zschocke J., Dikow N. (2013) A mutation in the FAM36A gene, the human ortholog of COX20, impairs cytochrome c oxidase assembly and is associated with ataxia and muscle hypotonia. Hum. Mol. Genet. 22, 656– 667 10.1093/hmg/dds473 23125284 · DOI
  150. [154]Bourens M., Boulet A., Leary S.C. and Barrientos A. (2014) Human COX20 cooperates with SCO1 and SCO2 to mature COX2 and promote the assembly of cytochrome c oxidase. Hum. Mol. Genet. 23, 2901– 2913 10.1093/hmg/ddu003 24403053 PMC4014192 · DOI
  151. [155]Lorenzi I., Oeljeklaus S., Aich A., Ronsor C., Callegari S., Dudek J. (2018) The mitochondrial TMEM177 associates with COX20 during COX2 biogenesis. Biochim. Biophys. Acta 1865, 323– 333 10.1016/j.bbamcr.2017.11.010 29154948 PMC5764226 · DOI
  152. [156]Leary S.C., Kaufman B.A., Pellecchia G., Guercin G.H., Mattman A., Jaksch M. (2004) Human SCO1 and SCO2 have independent, cooperative functions in copper delivery to cytochrome c oxidase. Hum. Mol. Genet. 13, 1839– 1848 10.1093/hmg/ddh197 15229189 · DOI
  153. [157]Leary S.C., Cobine P.A., Kaufman B.A., Guercin G.H., Mattman A., Palaty J. (2007) The human cytochrome c oxidase assembly factors SCO1 and SCO2 have regulatory roles in the maintenance of cellular copper homeostasis. Cell Metab. 5, 9– 20 10.1016/j.cmet.2006.12.001 17189203 · DOI
  154. [158]Leary S.C., Sasarman F., Nishimura T. and Shoubridge E.A. (2009) Human SCO2 is required for the synthesis of CO II and as a thiol-disulphide oxidoreductase for SCO1. Hum. Mol. Genet. 18, 2230– 2240 10.1093/hmg/ddp158 19336478 · DOI
  155. [159]Pacheu-Grau D., Bareth B., Dudek J., Juris L., Vogtle F.N., Wissel M. (2015) Cooperation between COA6 and SCO2 in COX2 maturation during cytochrome c oxidase assembly links two mitochondrial cardiomyopathies. Cell Metab. 21, 823– 833 10.1016/j.cmet.2015.04.012 25959673 · DOI
  156. [160]Stroud D.A., Maher M.J., Lindau C., Vogtle F.N., Frazier A.E., Surgenor E. (2015) COA6 is a mitochondrial complex IV assembly factor critical for biogenesis of mtDNA-encoded COX2. Hum. Mol. Genet. 24, 5404– 5415 10.1093/hmg/ddv265 26160915 · DOI
  157. [161]Ghosh A., Pratt A.T., Soma S., Theriault S.G., Griffin A.T., Trivedi P.P. (2016) Mitochondrial disease genes COA6, COX6B and SCO2 have overlapping roles in COX2 biogenesis. Hum. Mol. Genet. 25, 660– 671 10.1093/hmg/ddv503 26669719 PMC4743686 · DOI
  158. [162]Carlson C.G., Barrientos A., Tzagoloff A. and Glerum D.M. (2003) COX16 encodes a novel protein required for the assembly of cytochrome oxidase in Saccharomyces cerevisiae. J. Biol. Chem. 278, 3770– 3775 10.1074/jbc.M209893200 12446688 · DOI
  159. [163]Aich A., Wang C., Chowdhury A., Ronsor C., Pacheu-Grau D., Richter-Dennerlein R. (2018) COX16 promotes COX2 metallation and assembly during respiratory complex IV biogenesis. Elife 7, 10.7554/eLife.32572 29381136 PMC5809144 · DOI
  160. [164]Cerqua C., Morbidoni V., Desbats M.A., Doimo M., Frasson C., Sacconi S. (2018) COX16 is required for assembly of cytochrome c oxidase in human cells and is involved in copper delivery to COX2. Biochim. Biophys. Acta 1859, 244– 252 10.1016/j.bbabio.2018.01.004 29355485 · DOI
  161. [165]Church C., Goehring B., Forsha D., Wazny P. and Poyton R.O. (2005) A role for Pet100p in the assembly of yeast cytochrome c oxidase: interaction with a subassembly that accumulates in a pet100 mutant. J. Biol. Chem. 280, 1854– 1863 10.1074/jbc.M410726200 15507444 · DOI
  162. [166]Lim S.C., Smith K.R., Stroud D.A., Compton A.G., Tucker E.J., Dasvarma A. (2014) A founder mutation in PET100 causes isolated complex IV deficiency in Lebanese individuals with Leigh syndrome. Am. J. Hum. Genet. 94, 209– 222 10.1016/j.ajhg.2013.12.015 24462369 PMC3928654 · DOI
  163. [167]Olahova M., Haack T.B., Alston C.L., Houghton J.A., He L., Morris A.A. (2015) A truncating PET100 variant causing fatal infantile lactic acidosis and isolated cytochrome c oxidase deficiency. Eur. J. Hum. Genet. 23, 935– 939 10.1038/ejhg.2014.214 25293719 PMC4305338 · DOI
  164. [168]McEwen J.E., Hong K.H., Park S. and Preciado G.T. (1993) Sequence and chromosomal localization of two PET genes required for cytochrome c oxidase assembly in Saccharomyces cerevisiae. Curr. Genet. 23, 9– 14 10.1007/BF00336742 8381337 · DOI
  165. [169]Renkema G.H., Visser G., Baertling F., Wintjes L.T., Wolters V.M., van Montfrans J. (2017) Mutated PET117 causes complex IV deficiency and is associated with neurodevelopmental regression and medulla oblongata lesions. Hum. Genet. 136, 759– 769 10.1007/s00439-017-1794-7 28386624 PMC5429353 · DOI
  166. [170]Carroll J., Fearnley I.M., Skehel J.M., Shannon R.J., Hirst J. and Walker J.E. (2006) Bovine complex I is a complex of 45 different subunits. J. Biol. Chem. 281, 32724– 32727 10.1074/jbc.M607135200 16950771 · DOI
  167. [172]Jonckheere A.I., Smeitink J.A. and Rodenburg R.J. (2012) Mitochondrial ATP synthase: architecture, function and pathology. J. Inherit. Metab. Dis. 35, 211– 225 10.1007/s10545-011-9382-9 21874297 PMC3278611 · DOI
  168. [173]Watt I.N., Montgomery M.G., Runswick M.J., Leslie A.G. and Walker J.E. (2010) Bioenergetic cost of making an adenosine triphosphate molecule in animal mitochondria. Proc. Natl. Acad. Sci. U.S.A. 107, 16823– 16827 10.1073/pnas.1011099107 20847295 PMC2947889 · DOI · Paper page
  169. [174]Nijtmans L.G., Klement P., Houstek J. and Van den Bogert C. (1995) Assembly of mitochondrial ATP synthase in cultured human cells: implications for mitochondrial diseases. Biochim. Biophys. Acta 1272, 190– 198 10.1016/0925-4439(95)00087-9 8541352 · DOI
  170. [175]Carrozzo R., Wittig I., Santorelli F.M., Bertini E., Hofmann S., Brandt U. (2006) Subcomplexes of human ATP synthase mark mitochondrial biosynthesis disorders. Ann. Neurol. 59, 265– 275 10.1002/ana.20729 16365880 · DOI
  171. [176]Wittig I., Meyer B., Heide H., Steger M., Bleier L., Wumaier Z. (2010) Assembly and oligomerization of human ATP synthase lacking mitochondrial subunits a and A6L. Biochim. Biophys. Acta 1797, 1004– 1011 10.1016/j.bbabio.2010.02.021 20188060 · DOI
  172. [177]Fujikawa M., Sugawara K., Tanabe T. and Yoshida M. (2015) Assembly of human mitochondrial ATP synthase through two separate intermediates, F1-c-ring and b-e-g complex. FEBS Lett. 589, 2707– 2712 10.1016/j.febslet.2015.08.006 26297831 · DOI
  173. [178]He J., Carroll J., Ding S., Fearnley I.M. and Walker J.E. (2017) Permeability transition in human mitochondria persists in the absence of peripheral stalk subunits of ATP synthase. Proc. Natl. Acad. Sci. U.S.A. 114, 9086– 9091 10.1073/pnas.1711201114 28784775 PMC5576841 · DOI · Paper page
  174. [179]He J., Ford H.C., Carroll J., Ding S., Fearnley I.M. and Walker J.E. (2017) Persistence of the mitochondrial permeability transition in the absence of subunit c of human ATP synthase. Proc. Natl. Acad. Sci. U.S.A. 114, 3409– 3414 10.1073/pnas.1702357114 28289229 PMC5380099 · DOI · Paper page
  175. [180]He J., Ford H.C., Carroll J., Douglas C., Gonzales E., Ding S. (2018) Assembly of the membrane domain of ATP synthase in human mitochondria. Proc. Natl. Acad. Sci. U.S.A. 10.1073/pnas.1722086115 PMC5866602 29440398 · DOI
  176. [181]Ackerman S.H. and Tzagoloff A. (1990) Identification of two nuclear genes (ATP11, ATP12) required for assembly of the yeast F1-ATPase. Proc. Natl Acad. Sci. U.S.A. 87, 4986– 4990 10.1073/pnas.87.13.4986 2142305 PMC54246 · DOI
  177. [182]Wang Z.G. and Ackerman S.H. (2000) The assembly factor Atp11p binds to the beta-subunit of the mitochondrial F(1)-ATPase. J. Biol. Chem. 275, 5767– 5772 10.1074/jbc.275.8.5767 10681564 · DOI
  178. [183]Wang Z.G., Sheluho D., Gatti D.L. and Ackerman S.H. (2000) The alpha-subunit of the mitochondrial F(1) ATPase interacts directly with the assembly factor Atp12p. EMBO J. 19, 1486– 1493 10.1093/emboj/19.7.1486 10747017 PMC310218 · DOI
  179. [184]Wang Z.G., White P.S. and Ackerman S.H. (2001) Atp11p and Atp12p are assembly factors for the F(1)-ATPase in human mitochondria. J. Biol. Chem. 276, 30773– 30778 10.1074/jbc.M104133200 11410595 · DOI
  180. [185]De Meirleir L., Seneca S., Lissens W., De Clercq I., Eyskens F., Gerlo E. (2004) Respiratory chain complex V deficiency due to a mutation in the assembly gene ATP12. J. Med. Genet. 41, 120– 124 10.1136/jmg.2003.012047 14757859 PMC1735674 · DOI
  181. [186]Magner M., Dvorakova V., Tesarova M., Mazurova S., Hansikova H., Zahorec M. (2015) TMEM70 deficiency: long-term outcome of 48 patients. J. Inherit. Metab. Dis. 38, 417– 426 10.1007/s10545-014-9774-8 25326274 · DOI
  182. [187]Wittig I. and Schagger H. (2008) Structural organization of mitochondrial ATP synthase. Biochim. Biophys. Acta 1777, 592– 598 10.1016/j.bbabio.2008.04.027 18485888 · DOI
  183. [188]Mourier A., Matic S., Ruzzenente B., Larsson N.G. and Milenkovic D. (2014) The respiratory chain supercomplex organization is independent of COX7a2l isoforms. Cell Metab. 20, 1069– 1075 10.1016/j.cmet.2014.11.005 25470551 PMC4261080 · DOI
  184. [189]Guo R., Zong S., Wu M., Gu J. and Yang M. (2017) Architecture of human mitochondrial respiratory megacomplex I2III2IV2. Cell 170, 1247.e12– 1257.e12 10.1016/j.cell.2017.07.050 28844695 · DOI
  185. [190]Gu J., Wu M., Guo R., Yan K., Lei J., Gao N. (2016) The architecture of the mammalian respirasome. Nature 537, 639– 643 10.1038/nature19359 27654917 · DOI
  186. [191]Wu M., Gu J., Guo R., Huang Y. and Yang M. (2016) Structure of mammalian respiratory supercomplex I1III2IV1. Cell 167, 1598.e10– 609.e10 10.1016/j.cell.2016.11.012 27912063 · DOI
  187. [192]Letts J.A., Fiedorczuk K. and Sazanov L.A. (2016) The architecture of respiratory supercomplexes. Nature 537, 644– 648 10.1038/nature19774 27654913 · DOI · Paper page
  188. [193]Sousa J.S., Mills D.J., Vonck J. and Kuhlbrandt W. (2016) Functional asymmetry and electron flow in the bovine respirasome. Elife 5, 10.7554/eLife.21290 27830641 PMC5117854 · DOI
  189. [194]Lapuente-Brun E., Moreno-Loshuertos R., Acin-Perez R., Latorre-Pellicer A., Colas C., Balsa E. (2013) Supercomplex assembly determines electron flux in the mitochondrial electron transport chain. Science 340, 1567– 1570 10.1126/science.1230381 23812712 · DOI · Paper page
  190. [195]Moreno-Lastres D., Fontanesi F., Garcia-Consuegra I., Martin M.A., Arenas J., Barrientos A. (2012) Mitochondrial complex I plays an essential role in human respirasome assembly. Cell Metab. 15, 324– 335 10.1016/j.cmet.2012.01.015 22342700 PMC3318979 · DOI
  191. [197]Perez-Perez R., Lobo-Jarne T., Milenkovic D., Mourier A., Bratic A., Garcia-Bartolome A. (2016) COX7A2L is a mitochondrial complex III binding protein that stabilizes the III2+IV supercomplex without affecting respirasome formation. Cell Rep. 16, 2387– 2398 10.1016/j.celrep.2016.07.081 27545886 PMC5007171 · DOI
  192. [198]Cogliati S., Calvo E., Loureiro M., Guaras A.M., Nieto-Arellano R., Garcia-Poyatos C. (2016) Mechanism of super-assembly of respiratory complexes III and IV. Nature 539, 579– 582 10.1038/nature20157 27775717 · DOI
  193. [199]Formosa L.E., Dibley M.G., Stroud D.A. and Ryan M.T. (2018) Building a complex complex: assembly of mitochondrial respiratory chain complex I. Semin. Cell Dev. Biol., 76, 154– 162 28797839
  194. [200]Zhou A., Rohou A., Schep D.G., Bason J.V., Montgomery M.G., Walker J.E. (2015) Structure and conformational states of the bovine mitochondrial ATP synthase by cryo-EM. Elife 4, e10180 10.7554/eLife.10180 26439008 PMC4718723 · DOI
  195. [201]Ghezzi D., Zeviani M. (2018) Human diseases associated with defects in assembly of OXPHOS complexes. Essays Biochem. 62, 271– 286 10.1042/EBC20170099 30030362 PMC6056716 · DOI

Cited by

Sorted by citations

Authors
Signes, A., & Fernandez-Vizarra, E.
Affiliations
  • University of Cambridge (GB)
  • MRC-Mitochondrial Biology Unit, University of Cambridge, Hills Road, Cambridge CB2 0XY, U.K.
Venue
Essays in Biochemistry
Published
2018-07-20
Volume
62
Issue
3
Pages
255-270
ISSN
  • 0071-1365 (ISSN-L)
  • 1744-1358
OpenAlex
W2884533811
Cited by
267
References
6
Citations by year
2026: 27 · 2025: 20 · 2024: 40 · 2023: 32 · 2022: 42 · 2021: 50 · 2020: 40 · 2019: 14 · 2018: 1 · 2013: 1
FWCI
2.60
Type
journal article
Language
en
Open access
Locations
  • Essays in Biochemistry (publishedVersion, cc-by)
  • Europe PMC (PubMed Central) (publishedVersion, cc-by)
  • PubMed Central (publishedVersion, cc-by)
  • PubMed (publishedVersion)
  • Apollo (University of Cambridge) (submittedVersion, cc-by)
  • Padua Research Archive (University of Padova) (submittedVersion)
  • Apollo (cc-by)
Funders
Medical Research Council
Topics
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › Mitochondrial Function and Pathology
  • Life Sciences › Biochemistry, Genetics and Molecular Biology › Molecular Biology › ATP Synthase and ATPases Research
  • Physical Sciences › Materials Science › Materials Chemistry › Enzyme Structure and Function
Keywords
oxidative phosphorylation, respiratory supercomplexes, respirasome, mitochondrial respiratory chain, mitochondrial disease, assembly factors, molecular chaperones, prosthetic groups, complex I, cytochrome bc1 complex, cytochrome c oxidase, inner mitochondrial membrane
MeSH terms
Animals, Electron Transport, Humans, Mammals, Mitochondria, Multienzyme Complexes, Oxidative Phosphorylation

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