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Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440
Open accessAbstract
Summary: Pseudomonas putida is a metabolically versatile saprophytic soil bacterium that has been certified as a biosafety host for the cloning of foreign genes. The bacterium also has considerable potential for biotechnological applications. Sequence analysis of the 6.18 Mb genome of strain KT2440 reveals diverse transport and metabolic systems. Although there is a high level of genome conservation with the pathogenic Pseudomonad Pseudomonas aeruginosa (85% of the predicted coding regions are shared), key virulence factors including exotoxin A and type III secretion systems are absent. Analysis of the genome gives insight into the non‐pathogenic nature of P. putida and points to potential new applications in agriculture, biocatalysis, bioremediation and bioplastic production.
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Cited by
Nikel, P. I., & de Lorenzo, V. (2018) · Metabolic Engineering · doi:10.1016/j.ymben.2018.05.005 · Cited by 480
Taghavi, S., Barac, T., Greenberg, B., Borremans, B., Vangronsveld, J., & van der Lelie, D. (2005) · Applied and Environmental Microbiology · doi:10.1128/aem.71.12.8500-8505.2005 · Cited by 358
The revisited genome of Pseudomonas putida KT2440 enlightens its value as a robust metabolic chassis
Belda, E., van Heck, R. G. A., José Lopez‐Sanchez, M., Cruveiller, S., Barbe, V., Fraser, C., Klenk, H., Petersen, J., Morgat, A., Nikel, P. I., et al. (2016) · Environmental Microbiology · doi:10.1111/1462-2920.13230 · Cited by 338
Self-citationSchwan, W. R., Warrener, P., Keunz, E., Kendall Stover, C., & Folger, K. R. (2005) · International Journal of Medical Microbiology · doi:10.1016/j.ijmm.2005.05.005 · Cited by 86
Scott, J. C., Greenhut, I. V., & Leveau, J. H. J. (2013) · Journal of Chemical Ecology · doi:10.1007/s10886-013-0324-x · Cited by 67
Pini, C., Bernal, P., Godoy, P., Ramos, J., & Segura, A. (2009) · Microbial Biotechnology · doi:10.1111/j.1751-7915.2009.00084.x · Cited by 60
Gregson, B. H., Metodieva, G., Metodiev, M. V., & McKew, B. A. (2019) · Environmental Microbiology · doi:10.1111/1462-2920.14620 · Cited by 46
Fedeson, D. T., Saake, P., Calero, P., Nikel, P. I., & Ducat, D. C. (2020) · Microbial Biotechnology · doi:10.1111/1751-7915.13544 · Cited by 46
Clinton, B., Warden, A. C., Haboury, S., Easton, C. J., Kotsonis, S., Taylor, M. C., Oakeshott, J. G., Russell, R. J., & Scott, C. (2011) · Biocatalysis and Biotransformation · doi:10.3109/10242422.2011.578740 · Cited by 31
Suenaga, H., Fujihara, H., Kimura, N., Hirose, J., Watanabe, T., Futagami, T., Goto, M., Shimodaira, J., & Furukawa, K. (2017) · Environmental Microbiology Reports · doi:10.1111/1758-2229.12561 · Cited by 26
Selection of hyperadherent mutants in Pseudomonas putida biofilms
Yousef-Coronado, F., Soriano, M. I., Yang, L., Molin, S., & Espinosa-Urgel, M. (2011) · Microbiology · doi:10.1099/mic.0.047787-0 · Cited by 15
Ets, L., Ilves, H., Juhe, L., Ilmjärv, T., Puiggené, Ò., Nikel, P. I., & Kivisaar, M. (2026) · Journal of Bacteriology · doi:10.1128/jb.00479-25 · Cited by 1
Metadata
- Authors
- Nelson, K. E., Weinel, C., Paulsen, I. T., Dodson, R. J., Hilbert, H., Martins dos Santos, V. A. P., Fouts, D. E., Gill, S. R., Pop, M., Holmes, M., Brinkac, L., Beanan, M., DeBoy, R. T., Daugherty, S., Kolonay, J., Madupu, R., Nelson, W., White, O., Peterson, J., Khouri, H., Hance, I., Lee, P. C., Holtzapple, E., Scanlan, D., Tran, K., Moazzez, A., Utterback, T., Rizzo, M., Lee, K., Kosack, D., Moestl, D., Wedler, H., Lauber, J., Stjepandic, D., Hoheisel, J., Straetz, M., Heim, S., Kiewitz, C., Eisen, J., Timmis, K. N., Düsterhöft, A., Tümmler, B., & Fraser, C. M.
- Venue
- Environmental Microbiology
- Publisher
- Wiley
- Published
- 2002-12
- Volume
- 4
- Issue
- 12
- Pages
- 799-808
- ISSN
- 1462-2912 (ISSN-L)
- 1462-2920
- OpenAlex
- W2054920102
- Cited by
- 1,340
- References
- 0
- FWCI
- 20.95
- Type
- journal article
- Language
- en
- Open access
- green
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