Transcriptional programs in transient embryonic zones of the cerebral cortex defined by high-resolution mRNA sequencing

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome.

Langmead, B., Trapnell, C., Pop, M., & Salzberg, S. L. (2009) · Genome Biology · doi:10.1186/gb-2009-10-3-r25 · Cited by 21,849 · see citing works

Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

Trapnell, C., Williams, B. A., Pertea, G., Mortazavi, A., Kwan, G., van Baren, M. J., Salzberg, S. L., Wold, B. J., & Pachter, L. (2010) · Nature Biotechnology · doi:10.1038/nbt.1621 · Cited by 15,556 · see citing works

RNA-Seq: a revolutionary tool for transcriptomics

Wang, Z., Gerstein, M., & Snyder, M. (2009) · Nature Reviews Genetics · doi:10.1038/nrg2484 · Cited by 13,174 · see citing works

The GeneMANIA prediction server: Biological network integration for gene prioritization and predicting gene function

Warde-Farley, D., Donaldson, S. L., Comes, O., Zuberi, K., Badrawi, R., Chao, P., Franz, M., Grouios, C., Kazi, F., Lopes, C. T., et al. (2010) · Nucleic Acids Research · doi:10.1093/nar/gkq537 · Cited by 4,835 · see citing works

Specification of Cerebral Cortical Areas

Rakic, P. (1988) · Science · doi:10.1126/science.3291116 · Cited by 3,127 · see citing works

RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays

Marioni, J. C., Mason, C. E., Mane, S. M., Stephens, M., & Gilad, Y. (2008) · Genome Research · doi:10.1101/gr.079558.108 · Cited by 2,771 · see citing works

Widespread transcription at neuronal activity-regulated enhancers

Kim, T.-K., Hemberg, M., Gray, J. M., Costa, A. M., Bear, D. M., Wu, J., Harmin, D. A., Laptewicz, M., Barbara-Haley, K., Kuersten, S., et al. (2010) · Nature · doi:10.1038/nature09033 · Cited by 2,450 · see citing works

Cortical neurons arise in symmetric and asymmetric division zones and migrate through specific phases

Noctor, S. C., Martínez-Cerdeño, V., Ivic, L., & Kriegstein, A. R. (2004) · Nature Neuroscience · doi:10.1038/nn1172 · Cited by 2,229 · see citing works

Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

Bullard, J. H., Purdom, E., Hansen, K. D., & Dudoit, S. (2010) · BMC Bioinformatics · doi:10.1186/1471-2105-11-94 · Cited by 1,680 · see citing works

ChIP-seq accurately predicts tissue-specific activity of enhancers

Visel, A., Blow, M. J., Li, Z., Zhang, T., Akiyama, J. A., Holt, A., Plajzer-Frick, I., Shoukry, M., Wright, C., Chen, F., et al. (2009) · Nature · doi:10.1038/nature07730 · Cited by 1,639 · see citing works

Neurogenic radial glia in the outer subventricular zone of human neocortex

Hansen, D. V., Lui, J. H., Parker, P. R. L., & Kriegstein, A. R. (2010) · Nature · doi:10.1038/nature08845 · Cited by 1,388 · see citing works

Development of the human cerebral cortex: Boulder Committee revisited

Bystron, I., Blakemore, C., & Rakic, P. (2008) · Nature Reviews Neuroscience · doi:10.1038/nrn2252 · Cited by 977 · see citing works

OSVZ progenitors of human and ferret neocortex are epithelial-like and expand by integrin signaling

Fietz, S. A., Kelava, I., Vogt, J., Wilsch-Bräuninger, M., Stenzel, D., Fish, J. L., Corbeil, D., Riehn, A., Distler, W., Nitsch, R., et al. (2010) · Nature Neuroscience · doi:10.1038/nn.2553 · Cited by 830 · see citing works

The timing of cortical neurogenesis is encoded within lineages of individual progenitor cells

Shen, Q., Wang, Y., Dimos, J. T., Fasano, C. A., Phoenix, T. N., Lemischka, I. R., Ivanova, N. B., Stifani, S., Morrisey, E. E., & Temple, S. (2006) · Nature Neuroscience · doi:10.1038/nn1694 · Cited by 625 · see citing works

Functional and Evolutionary Insights into Human Brain Development through Global Transcriptome Analysis

Johnson, M. B., Kawasawa, Y. I., Mason, C. E., Krsnik, Ž., Coppola, G., Bogdanović, D., Geschwind, D. H., Mane, S. M., State, M. W., & Šestan, N. (2009) · Neuron · doi:10.1016/j.neuron.2009.03.027 · Cited by 603 · see citing works

Protein Diversity from Alternative Splicing

Black, D. L. (2000) · Cell · doi:10.1016/s0092-8674(00)00128-8 · Cited by 565 · see citing works

Expression of Cux‐1 and Cux‐2 in the subventricular zone and upper layers II–IV of the cerebral cortex

Nieto, M., Monuki, E. S., Tang, H., Imitola, J., Haubst, N., Khoury, S. J., Cunningham, J., Götz, M., & Walsh, C. A. (2004) · The Journal of Comparative Neurology · doi:10.1002/cne.20322 · Cited by 548 · see citing works

ChIP-Seq identification of weakly conserved heart enhancers

Blow, M. J., McCulley, D. J., Li, Z., Zhang, T., Akiyama, J. A., Holt, A., Plajzer-Frick, I., Shoukry, M., Wright, C., Chen, F., et al. (2010) · Nature Genetics · doi:10.1038/ng.650 · Cited by 417 · see citing works

Intermediate Neuronal Progenitors (Basal Progenitors) Produce Pyramidal–Projection Neurons for All Layers of Cerebral Cortex

Kowalczyk, T., Pontious, A., Englund, C., Daza, R. A. M., Bedogni, F., Hodge, R. D., Attardo, A., Bell, C., Huttner, W. Β., & Hevner, R. F. (2009) · Cerebral Cortex · doi:10.1093/cercor/bhn260 · Cited by 407 · see citing works

The Level of the Transcription Factor Pax6 Is Essential for Controlling the Balance between Neural Stem Cell Self-Renewal and Neurogenesis

Sansom, S. N., Griffiths, D. S., Faedo, A., Kleinjan, D., Ruan, Y., Smith, J. C., van Heyningen, V., Rubenstein, J. L. R., & Livesey, F. J. (2009) · PLoS Genetics · doi:10.1371/journal.pgen.1000511 · Cited by 401 · see citing works

Progressive restriction in fate potential by neural progenitors during cerebral cortical development

Desai, A. R., & McConnell, S. K. (2000) · Development · doi:10.1242/dev.127.13.2863 · Cited by 383 · see citing works

Tbr2 Directs Conversion of Radial Glia into Basal Precursors and Guides Neuronal Amplification by Indirect Neurogenesis in the Developing Neocortex

Sessa, A., Mao, C., Hadjantonakis, A., Klein, W. H., & Broccoli, V. (2008) · Neuron · doi:10.1016/j.neuron.2008.09.028 · Cited by 372 · see citing works

Molecular and Morphological Heterogeneity of Neural Precursors in the Mouse Neocortical Proliferative Zones

Gal, J. S., Morozov, Y. M., Ayoub, A. E., Chatterjee, M., RAKIC, P. T., & Haydar, T. F. (2006) · Journal of Neuroscience · doi:10.1523/jneurosci.4499-05.2006 · Cited by 343 · see citing works

Sequence of Neuron Origin and Neocortical Laminar Fate: Relation to Cell Cycle of Origin in the Developing Murine Cerebral Wall

Takahashi, T., Goto, T., Miyama, S., Nowakowski, R. S., & Caviness, V. S. (1999) · Journal of Neuroscience · doi:10.1523/jneurosci.19-23-10357.1999 · Cited by 328 · see citing works

Whole Transcriptome Sequencing Reveals Gene Expression and Splicing Differences in Brain Regions Affected by Alzheimer's Disease

Twine, N. A., Janitz, K., Wilkins, M. R., & Janitz, M. (2011) · PLoS ONE · doi:10.1371/journal.pone.0016266 · Cited by 295 · see citing works

Decision by division: making cortical maps

RAKIC, P. T., Ayoub, A. E., Breunig, J. J., & Dominguez, M. H. (2009) · Trends in Neurosciences · doi:10.1016/j.tins.2009.01.007 · Cited by 272 · see citing works

SOX5 postmitotically regulates migration, postmigratory differentiation, and projections of subplate and deep-layer neocortical neurons

Kwan, K. Y., Lam, M. M. S., Krsnik, Ž., Kawasawa, Y. I., Lefebvre, V., & Šestan, N. (2008) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0806791105 · Cited by 271 · see citing works

Zfp312 is required for subcortical axonal projections and dendritic morphology of deep-layer pyramidal neurons of the cerebral cortex

Chen, J.-G., Rašin, M.-R., Kwan, K. Y., & Šestan, N. (2005) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0509032102 · Cited by 246 · see citing works

Cell fate specification in the mammalian telencephalon

Guillemot, F. (2007) · Progress in Neurobiology · doi:10.1016/j.pneurobio.2007.02.009 · Cited by 243 · see citing works

Heterogeneity in Ventricular Zone Neural Precursors Contributes to Neuronal Fate Diversity in the Postnatal Neocortex

Stancik, E. K., Navarro-Quiroga, I., Sellke, R., & Haydar, T. F. (2010) · The Journal of Neuroscience · doi:10.1523/jneurosci.6131-09.2010 · Cited by 186 · see citing works

Bhlhb5 Regulates the Postmitotic Acquisition of Area Identities in Layers II-V of the Developing Neocortex

Joshi, P. S., Molyneaux, B. J., Feng, L., Xie, X., Macklis, J. D., & Gan, L. (2008) · Neuron · doi:10.1016/j.neuron.2008.08.006 · Cited by 169 · see citing works

Live Imaging at the Onset of Cortical Neurogenesis Reveals Differential Appearance of the Neuronal Phenotype in Apical versus Basal Progenitor Progeny

Attardo, A., Calegari, F., Haubensak, W. E., Wilsch‐Bräuninger, M., & Huttner, W. Β. (2008) · PLoS ONE · doi:10.1371/journal.pone.0002388 · Cited by 165 · see citing works

Alterations in CDH15 and KIRREL3 in Patients with Mild to Severe Intellectual Disability

Bhalla, K., Luo, Y. Y., Buchan, T., Beachem, M. A., Guzauskas, G. F., Ladd, S., Bratcher, S. J., Schroer, R. J., Balsamo, J., DuPont, B. R., et al. (2008) · The American Journal of Human Genetics · doi:10.1016/j.ajhg.2008.10.020 · Cited by 144 · see citing works

A Century of Progress in Corticoneurogenesis: From Silver Impregnation to Genetic Engineering

RAKIC, P. T. (2006) · Cerebral Cortex · doi:10.1093/cercor/bhk036 · Cited by 142 · see citing works

Integration of neuronal clones in the radial cortical columns by EphA and ephrin-A signalling

Torii, M., Hashimoto‐Torii, K., Levitt, P. R., & RAKIC, P. T. (2009) · Nature · doi:10.1038/nature08362 · Cited by 138 · see citing works

Telencephalic Neural Progenitors Appear To Be Restricted to Regional and Glial Fates before the Onset of Neurogenesis

McCarthy, M., Turnbull, D. H., Walsh, C. A., & Fishell, G. (2001) · Journal of Neuroscience · doi:10.1523/jneurosci.21-17-06772.2001 · Cited by 133 · see citing works

Basic Helix-Loop-Helix Transcription Factors Cooperate To Specify a Cortical Projection Neuron Identity

Mattar, P. A., Langevin, L. M., Markham, K., Klenin, N., Shivji, S., Zinyk, D. L., & Schuurmans, C. J. (2007) · Molecular and Cellular Biology · doi:10.1128/mcb.01510-07 · Cited by 112 · see citing works

The organization of the transcriptional network in specific neuronal classes

Winden, K. D., Oldham, M. C., Mirnics, K., Ebert, P. J., Swan, C. H., Levitt, P., Rubenstein, J. L., Horvath, S., & Geschwind, D. H. (2009) · Molecular Systems Biology · doi:10.1038/msb.2009.46 · Cited by 112 · see citing works

Characterization of the proneural gene regulatory network during mouse telencephalon development

Gohlke, J. M., Armant, O., Parham, F., Smith, M. V., Zimmer, C., Castro, D. S., Nguyen, L., Parker, J. S., Gradwohl, G., Portier, C. J., et al. (2008) · BMC Biology · doi:10.1186/1741-7007-6-15 · Cited by 107 · see citing works

AutoSOME: a clustering method for identifying gene expression modules without prior knowledge of cluster number

Newman, A. M., & Cooper, J. B. (2010) · BMC Bioinformatics · doi:10.1186/1471-2105-11-117 · Cited by 104 · see citing works

Transcriptome of embryonic and neonatal mouse cortex by high-throughput RNA sequencing

Han, X., Wu, X., Chung, W.-Y., Li, T., Nekrutenko, A., Altman, N. S., Chen, G., & Ma, H. (2009) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.0902417106 · Cited by 83 · see citing works

Neural Stem/Progenitor Cells Express 20 Tenascin C Isoforms That Are Differentially Regulated by Pax6

von Holst, A., Egbers, U., Prochiantz, A., & Faissner, A. (2007) · Journal of Biological Chemistry · doi:10.1074/jbc.m608067200 · Cited by 81 · see citing works

Identification of Gene Markers Associated With Aggressive Meningioma by Filtering Across Multiple Sets of Gene Expression Arrays

Stuart, J. E., Lusis, E. A., Scheck, A. C., Coons, S. W., Lal, A., Perry, A., & Gutmann, D. H. (2010) · Journal of Neuropathology & Experimental Neurology · doi:10.1097/nen.0b013e3182018f1c · Cited by 61 · see citing works

Conditional activation ofPax6in the developing cortex of transgenic mice causes progenitor apoptosis

Berger, J., Berger, S., Tuoc, T., D’Amelio, M., Cecconi, F., Gorski, J. A., Jones, K. R., Gruß, P., & Stoykova, A. (2007) · Development · doi:10.1242/dev.02809 · Cited by 61 · see citing works

Molecular heterogeneity of progenitors and radial migration in the developing cerebral cortex revealed by transgene expression.

Soriano, E., Dumesnil, N., Auladell, C., Cohen‐Tannoudji, M., & Sotelo, C. (1995) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.92.25.11676 · Cited by 60 · see citing works

Imprinting in the schizophrenia candidate gene GABRB2 encoding GABAA receptor β2 subunit

Pun, F. W., Zhao, C., Lo, W.-S., Ng, S.-K., Tsang, S.-Y., Nimgaonkar, V, Chung, W. S., Ungvari, G. S., & Xue, H. (2011) · Molecular Psychiatry · doi:10.1038/mp.2010.47 · Cited by 53 · see citing works

Genetics of disorders of cortical development

Gaitanis, J. N., & Walsh, C. A. (2004) · Neuroimaging Clinics of North America · doi:10.1016/j.nic.2004.03.007 · Cited by 33 · see citing works

Genetic Analysis of Anterior-Posterior Expression Gradients in the Developing Mammalian Forebrain

Kudo, L. C., Karsten, S. L., Chen, J., Levitt, P. R., & Geschwind, D. H. (2006) · Cerebral Cortex · doi:10.1093/cercor/bhl118 · Cited by 31 · see citing works

Birth‐date‐dependent segregation of the mouse cerebral cortical neurons in reaggregation cultures

Ajioka, I., & Nakajima, K. (2005) · European Journal of Neuroscience · doi:10.1111/j.1460-9568.2005.04214.x · Cited by 30 · see citing works

Distinct roles of neuropilin 1 signaling for radial and tangential extension of callosal axons

Hatanaka, Y., Matsumoto, T., Yanagawa, Y., Fujisawa, H., Murakami, F., & Masu, M. (2009) · The Journal of Comparative Neurology · doi:10.1002/cne.22021 · Cited by 29 · see citing works

Identification of molecules preferentially expressed beneath the marginal zone in the developing cerebral cortex

Tachikawa, K., Sasaki, S., Maeda, T., & Nakajima, K. (2007) · Neuroscience Research · doi:10.1016/j.neures.2007.10.006 · Cited by 23 · see citing works

Pediatric Brain Tumors

Grondin, R. T., Scott, R. M., & Smith, E. R. (2009) · Advances in Pediatrics · doi:10.1016/j.yapd.2009.08.006 · Cited by 14 · see citing works

Transcriptional landscape of the prenatal human brain

Miller, J. A., Ding, S.-L., Sunkin, S. M., Smith, K. A., Ng, L., Szafer, A., Ebbert, A., Riley, Z. L., Royall, J. J., Aiona, K., et al. (2014) · Nature · doi:10.1038/nature13185 · Cited by 1,325 · see citing works

Human-specific gene <i>ARHGAP11B</i> promotes basal progenitor amplification and neocortex expansion

Florio, M., Albert, M., Taverna, E., Namba, T., Brandl, H., Lewitus, E., Haffner, C., Sykes, A., Wong, F. K., Peters, J., et al. (2015) · Science · doi:10.1126/science.aaa1975 · Cited by 632 · see citing works

Neural Stem Cells: Generating and Regenerating the Brain

Gage, F. H., & Temple, S. (2013) · Neuron · doi:10.1016/j.neuron.2013.10.037 · Cited by 571 · see citing works

Cell-Type-Specific Alternative Splicing Governs Cell Fate in the Developing Cerebral Cortex

Zhang, X., Chen, M. H., Wu, X., Kodani, A., Fan, J., Doan, R. N., Ozawa, M., Ma, J., Yoshida, N., Reiter, J. F., et al. (2016) · Cell · doi:10.1016/j.cell.2016.07.025 · Cited by 343 · see citing works

Transcriptomes of germinal zones of human and mouse fetal neocortex suggest a role of extracellular matrix in progenitor self-renewal

Fietz, S. A., Lachmann, R., Brandl, H., Kircher, M., Samusik, N., Schröder, R., Lakshmanaperumal, N., Henry, I., Vogt, J., Riehn, A., et al. (2012) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1209647109 · Cited by 337 · see citing works

DeCoN: Genome-wide Analysis of In Vivo Transcriptional Dynamics during Pyramidal Neuron Fate Selection in Neocortex

Molyneaux, B. J., Goff, L. A., Brettler, A. C., Chen, H.-H., Brown, J. R., Hrvatin, S., Rinn, J. L., & Arlotta, P. (2014) · Neuron · doi:10.1016/j.neuron.2014.12.024 · Cited by 247 · see citing works

Integration of Genome-wide Approaches Identifies lncRNAs of Adult Neural Stem Cells and Their Progeny In Vivo

Ramos, A. D., Diaz, A. A., Nellore, A., Delgado, R. N., Park, K.-Y., Gonzales-Roybal, G., Oldham, M. C., Song, J. S., & Lim, D. A. (2013) · Cell stem cell · doi:10.1016/j.stem.2013.03.003 · Cited by 240 · see citing works

Transcriptome sequencing during mouse brain development identifies long non‐coding RNAs functionally involved in neurogenic commitment

Aprea, J., Prenninger, S., Dori, M., Ghosh, T., Monasor, L. S., Wessendorf, E., Zocher, S., Massalini, S., Alexopoulou, D., Lesche, M., et al. (2013) · The EMBO Journal · doi:10.1038/emboj.2013.245 · Cited by 219 · see citing works

POU-III Transcription Factors (Brn1, Brn2, and Oct6) Influence Neurogenesis, Molecular Identity, and Migratory Destination of Upper-Layer Cells of the Cerebral Cortex

Dominguez, M. H., Ayoub, A. E., & RAKIC, P. T. (2012) · Cerebral Cortex · doi:10.1093/cercor/bhs252 · Cited by 209 · see citing works

Pathogenic DDX3X Mutations Impair RNA Metabolism and Neurogenesis during Fetal Cortical Development

Lennox, A. L., Hoye, M. L., Jiang, R., Johnson-Kerner, B., Suit, L., Venkataramanan, S., Sheehan, C. J., Alsina, F. C., Fregeau, B., Aldinger, K. A., et al. (2020) · Neuron · doi:10.1016/j.neuron.2020.01.042 · Cited by 205 · see citing works

Large transcription units unify copy number variants and common fragile sites arising under replication stressPreprint

Wilson, T. E., Arlt, M. F., Park, S. H., Rajendran, S., Paulsen, M. T., Ljungman, M. E., & Glover, T. W. (2014) · Genome Research · doi:10.1101/gr.177121.114 · Cited by 184 · see citing works

Discrete domains of gene expression in germinal layers distinguish the development of gyrencephaly

Romero, C. D. J., Bruder, C. E. G., Tomasello, U., Sanz‐Anquela, J. M., & Borrell, V. (2015) · The EMBO Journal · doi:10.15252/embj.201591176 · Cited by 173 · see citing works

Deficiency of Asparagine Synthetase Causes Congenital Microcephaly and a Progressive Form of Encephalopathy

Ruzzo, E. K., Capo‐Chichi, J., Ben‐Zeev, B., Chitayat, D. A., Mao, H., Pappas, A. L., Hitomi, Y., Lu, Y., Yao, X., Hamdan, F. F., et al. (2013) · Neuron · doi:10.1016/j.neuron.2013.08.013 · Cited by 167 · see citing works

Mind the blind brain to understand the sighted one! Is there a supramodal cortical functional architecture?

Ricciardi, E., Bonino, D., Pellegrini, S., & Pietrini, P. (2014) · Neuroscience &amp; Biobehavioral Reviews · doi:10.1016/j.neubiorev.2013.10.006 · Cited by 154 · see citing works

Genetic Changes Shaping the Human Brain

Bae, B.-I., Jayaraman, D., & Walsh, C. A. (2015) · Developmental Cell · doi:10.1016/j.devcel.2015.01.035 · Cited by 135 · see citing works

Gene co-regulation by Fezf2 selects neurotransmitter identity and connectivity of corticospinal neurons

Lodato, S., Molyneaux, B. J., Zuccaro, E., Goff, L. A., Chen, H.-H., Yuan, W., Meleski, A., Takahashi, E., Mahony, S., Rinn, J. L., et al. (2014) · Nature Neuroscience · doi:10.1038/nn.3757 · Cited by 135 · see citing works

Mapping gene regulatory circuitry of Pax6 during neurogenesis

Thakurela, S., Tiwari, N., Schick, S., Garding, A., Ivánek, R., Berninger, B., & Tiwari, V. K. (2016) · Cell Discovery · doi:10.1038/celldisc.2015.45 · Cited by 131 · see citing works

A restricted period for formation of outer subventricular zone defined by Cdh1 and Trnp1 levels

Martínez‐Martínez, M. Á., Romero, C. D. J., Fernández, V., Cárdenas, A., Götz, M., & Borrell, V. (2016) · Nature Communications · doi:10.1038/ncomms11812 · Cited by 129 · see citing works

Genetics and mechanisms leading to human cortical malformations

Romero, D. M., Bahi‐Buisson, N., & Francis, F. (2017) · Seminars in Cell and Developmental Biology · doi:10.1016/j.semcdb.2017.09.031 · Cited by 126 · see citing works

The genomic landscape of cohesin-associated chromatin interactions

DeMare, L. E., Leng, J., Cotney, J., Reilly, S. K., Yin, J., Sarro, R., & Noonan, J. P. (2013) · Genome Research · doi:10.1101/gr.156570.113 · Cited by 114 · see citing works

Ankle2, a Target of Zika Virus, Controls Asymmetric Cell Division of Neuroblasts and Uncovers a Novel Microcephaly Pathway

Link, N., Chung, H.-L., Jolly, A., Withers, M. A., Tepe, B., Arenkiel, B. R., Shah, P. S., Krogan, N. J., Aydın, H., Geçkinli, B. B., et al. (2019) · Developmental Cell · doi:10.1016/j.devcel.2019.10.009 · Cited by 108 · see citing works

A family of transposable elements co-opted into developmental enhancers in the mouse neocortex

Notwell, J. H., Chung, T. R., Heavner, W. E., & Bejerano, G. (2015) · Nature Communications · doi:10.1038/ncomms7644 · Cited by 104 · see citing works

Katanin p80 Regulates Human Cortical Development by Limiting Centriole and Cilia Number

Hu, W. F., Pomp, O., Ben‐Omran, T., Kodani, A., Henke, K., Mochida, G. H., Yu, T. W., Woodworth, M. B., Bonnard, C., Raj, G. S., et al. (2014) · Neuron · doi:10.1016/j.neuron.2014.12.017 · Cited by 99 · see citing works

Temporally defined neocortical translation and polysome assembly are determined by the RNA-binding protein Hu antigen R

Kraushar, M. L., Thompson, K., Wijeratne, H. R. S., Viljetic, B., Sakers, K., Marson, J. W., Kontoyiannis, D. L., Buyske, S., Hart, R. P., & Rasin, M.-R. (2014) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1408305111 · Cited by 98 · see citing works

Evolution and development of the mammalian cerebral cortex

Molnár, Z., Kaas, J. H., de Carlos, J. A., Hevner, R. F., Lein, E., & Němec, P. (2014) · Brain Behavior and Evolution · doi:10.1159/000357753 · Cited by 93 · see citing works

Transcriptomic Perspectives on Neocortical Structure, Development, Evolution, and Disease

Lein, E. S., Belgard, T. G., Hawrylycz, M., & Molnár, Z. (2017) · Annual Review of Neuroscience · doi:10.1146/annurev-neuro-070815-013858 · Cited by 92 · see citing works

Defects During<i>Mecp2</i>Null Embryonic Cortex Development Precede the Onset of Overt Neurological Symptoms

Bedogni, F., Cobolli Gigli, C., Pozzi, D., Rossi, R. L., Scaramuzza, L., Rossetti, G., Pagani, M., Kilstrup-Nielsen, C., Matteoli, M., & Landsberger, N. (2016) · Cerebral Cortex · doi:10.1093/cercor/bhv078 · Cited by 84 · see citing works

Cortical gene expression architecture links healthy neurodevelopment to the imaging, transcriptomics and genetics of autism and schizophrenia

Dear, R., Wagstyl, K., Seidlitz, J., Markello, R. D., Arnatkevičiūtė, A., Anderson, K. M., Bethlehem, R. A. I., Raznahan, A., Bullmore, E. T., & Vértes, P. E. (2024) · Nature Neuroscience · doi:10.1038/s41593-024-01624-4 · Cited by 83 · see citing works

Rbm8a Haploinsufficiency Disrupts Embryonic Cortical Development Resulting in Microcephaly

Mao, H., Pilaz, L., McMahon, J. J., Golzio, C., Wu, D., Shi, L., Katsanis, N., & Silver, D. L. (2015) · Journal of Neuroscience · doi:10.1523/jneurosci.0018-15.2015 · Cited by 82 · see citing works

ELAVL2-regulated transcriptional and splicing networks in human neurons link neurodevelopment and autism

Berto, S., Usui, N., Konopka, G., & Fogel, B. L. (2016) · Human Molecular Genetics · doi:10.1093/hmg/ddw110 · Cited by 80 · see citing works

Brain Transcriptome Databases: A User's Guide

Keil, J. M., Qalieh, A., & Kwan, K. Y. (2018) · Journal of Neuroscience · doi:10.1523/jneurosci.1930-17.2018 · Cited by 74 · see citing works

The regulation of cortical neurogenesis

Villalba, A., Götz, M., & Borrell, V. (2020) · Current topics in developmental biology/Current Topics in Developmental Biology · doi:10.1016/bs.ctdb.2020.10.003 · Cited by 74 · see citing works

From sauropsids to mammals and back: New approaches to comparative cortical development

Montiel, J. F., Vasistha, N. A., García‐Moreno, F., & Molnár, Z. (2015) · The Journal of Comparative Neurology · doi:10.1002/cne.23871 · Cited by 74 · see citing works

Nipbl Interacts with Zfp609 and the Integrator Complex to Regulate Cortical Neuron Migration

van den Berg, D. L. C., Azzarelli, R., Oishi, K., Martynoga, B., Urbán, N., Dekkers, D. H. W., Demmers, J., & Guillemot, F. (2016) · Neuron · doi:10.1016/j.neuron.2016.11.047 · Cited by 72 · see citing works

Progenitor cell diversity in the developing mouse neocortex

Ruan, X., Kang, B., Qi, C., Lin, W., Wang, J., & Zhang, X. (2021) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2018866118 · Cited by 71 · see citing works

Post‐transcriptional regulation in corticogenesis: how RNA‐binding proteins help build the brain

Pilaz, L., & Silver, D. L. (2015) · Wiley Interdisciplinary Reviews - RNA · doi:10.1002/wrna.1289 · Cited by 71 · see citing works

RNA on the brain: emerging layers of post‐transcriptional regulation in cerebral cortex development

Lennox, A. L., Mao, H., & Silver, D. L. (2017) · Wiley Interdisciplinary Reviews Developmental Biology · doi:10.1002/wdev.290 · Cited by 70 · see citing works

In vivo genetic manipulation of cortical progenitors in gyrencephalic carnivores using in utero electroporation

Kawasaki, H., Toda, T., & Tanno, K. (2012) · Biology Open · doi:10.1242/bio.20123160 · Cited by 65 · see citing works

RNA-Seq Profiling of Spinal Cord Motor Neurons from a Presymptomatic SOD1 ALS Mouse

Bandyopadhyay, U., Cotney, J. L., Nagy, M., Oh, S., Leng, J., Mahajan, M. C., Mane, S., Fenton, W. A., Noonan, J. P., & Horwich, A. L. (2013) · PLoS ONE · doi:10.1371/journal.pone.0053575 · Cited by 64 · see citing works

Translating neural stem cells to neurons in the mammalian brain

Zahr, S. K., Kaplan, D. R., & Miller, F. D. (2019) · Cell Death and Differentiation · doi:10.1038/s41418-019-0411-9 · Cited by 63 · see citing works

Cortical Neurogenesis Requires Bcl6-Mediated Transcriptional Repression of Multiple Self-Renewal-Promoting Extrinsic Pathways

Bonnefont, J., Tiberi, L., van den Ameele, J., Potier, D., Gaber, Z. B., Lin, X., Bilheu, A., Herpoel, A., Velez-Bravo, F. D., Guillemot, F., et al. (2019) · Neuron · doi:10.1016/j.neuron.2019.06.027 · Cited by 62 · see citing works

Trrap-Dependent Histone Acetylation Specifically Regulates Cell-Cycle Gene Transcription to Control Neural Progenitor Fate Decisions

Tapias, A., Zhou, Z., Shi, Y. X., Chong, Z., Wang, P., Groth, M., Platzer, M., Huttner, W. Β., Herceg, Z., Yang, Y., et al. (2014) · Cell stem cell · doi:10.1016/j.stem.2014.04.001 · Cited by 60 · see citing works

Radial and tangential neuronal migration pathways in the human fetal brain: Anatomically distinct patterns of diffusion MRI coherence

Kolasinski, J., Takahashi, E., Stevens, A. A., Benner, T., Fischl, B. R., Zöllei, L., & Grant, P. E. (2013) · NeuroImage · doi:10.1016/j.neuroimage.2013.04.125 · Cited by 60 · see citing works

Genome-wide target analysis of NEUROD2 provides new insights into regulation of cortical projection neuron migration and differentiation

Bayam, E., Sahin, G. S., Guzelsoy, G., Guner, G., Kabakcioglu, A., & Ince-Dunn, G. (2015) · BMC Genomics · doi:10.1186/s12864-015-1882-9 · Cited by 57 · see citing works

Transcriptomic response to low salinity stress in gills of the Pacific white shrimp, Litopenaeus vannamei

Hu, D., Pan, L., Zhao, Q., & Ren, Q. (2015) · Marine Genomics · doi:10.1016/j.margen.2015.07.003 · Cited by 56 · see citing works

The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1

Elsen, G. E., Bedogni, F., Hodge, R. D., Bammler, T. K., MacDonald, J. W., Lindtner, S., Rubenstein, J. L. R., & Hevner, R. F. (2018) · Frontiers in Neuroscience · doi:10.3389/fnins.2018.00571 · Cited by 56 · see citing works

Translational derepression of Elavl4 isoforms at their alternative 5′ UTRs determines neuronal development

Popovitchenko, T., Park, Y., Page, N. F., Luo, X., Krsnik, Z., Liu, Y., Salamon, I., Stephenson, J. D., Kraushar, M. L., Volk, N. L., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-15412-8 · Cited by 55 · see citing works

Novel function of PIWIL1 in neuronal polarization and migration via regulation of microtubule-associated proteins

Zhao, P., Yao, M., Chang, S., Gou, L., Liu, M., Qiu, Z., & Yuan, X. (2015) · Molecular Brain · doi:10.1186/s13041-015-0131-0 · Cited by 54 · see citing works

Thalamic WNT3 Secretion Spatiotemporally Regulates the Neocortical Ribosome Signature and mRNA Translation to Specify Neocortical Cell Subtypes

Kraushar, M. L., Viljetić, B., Wijeratne, H. R. S., Thompson, K., Jiao, X., Pike, J. W., Medvedeva, V. P., Groszer, M., Kiledjian, M., Hart, R. P., et al. (2015) · Journal of Neuroscience · doi:10.1523/jneurosci.0601-15.2015 · Cited by 52 · see citing works

Tox: a multifunctional transcription factor and novel regulator of mammalian corticogenesis

Artegiani, B., Domingues, A. M. D. J., Alonso, S. B., Brandl, E., Massalini, S., Dahl, A., & Calegari, F. (2014) · The EMBO Journal · doi:10.15252/embj.201490061 · Cited by 52 · see citing works

Epigenetic and Transcriptional Pre-patterning—An Emerging Theme in Cortical Neurogenesis

Albert, M., & Huttner, W. Β. (2018) · Frontiers in Neuroscience · doi:10.3389/fnins.2018.00359 · Cited by 50 · see citing works

Long non-coding RNA LncKdm2b regulates cortical neuronal differentiation by cis-activating Kdm2b

Li, W., Shen, W., Zhang, B., Tian, K., Li, Y., Mu, L., Luo, Z., Zhong, X., Wu, X., Liu, Y., et al. (2019) · Protein & Cell · doi:10.1007/s13238-019-0650-z · Cited by 48 · see citing works

Prenatal stress leads to deficits in brain development, mood related behaviors and gut microbiota in offspring

Zhang, Z., Li, N., Chen, R., Lee, T., Gao, Y.-X., Yuan, Z., Nie, Y., & Sun, T. (2021) · Neurobiology of Stress · doi:10.1016/j.ynstr.2021.100333 · Cited by 48 · see citing works

Post-transcriptional regulatory elements and spatiotemporal specification of neocortical stem cells and projection neurons

DeBoer, E., Kraushar, M. L., Hart, R. P., & Rašin, M. (2013) · Neuroscience · doi:10.1016/j.neuroscience.2013.05.042 · Cited by 45 · see citing works

Antibodies to cannabinoid type 1 receptor co‐react with stomatin‐like protein 2 in mouse brain mitochondria

Morozov, Y. M., Dominguez, M. H., Varela, L., Shanabrough, M., Koch, M., Horváth, T. L., & RAKIC, P. T. (2013) · European Journal of Neuroscience · doi:10.1111/ejn.12237 · Cited by 42 · see citing works

Recent advances in understanding neocortical development

Borrell, V. (2019) · F1000Research · doi:10.12688/f1000research.20332.1 · Cited by 42 · see citing works

Prdm8 regulates the morphological transition at multipolar phase during neocortical development

Inoue, M., Kuroda, T., Honda, A., Komabayashi-Suzuki, M., Komai, T., Shinkai, Y., & Mizutani, K.-I. (2014) · PLoS ONE · doi:10.1371/journal.pone.0086356 · Cited by 41 · see citing works

A Complex Code of Extrinsic Influences on Cortical Progenitor Cells of Higher Mammals

Reillo, I., Romero, C. D. J., Cárdenas, A., Clascá, F., Martínez‐Martínez, M. Á., & Borrell, V. (2017) · Cerebral Cortex · doi:10.1093/cercor/bhx171 · Cited by 41 · see citing works

Analogous mechanism regulating formation of neocortical basal radial glia and cerebellar Bergmann glia

Heng, X., Guo, Q., Leung, A. W., & Li, J. Y. H. (2017) · eLife · doi:10.7554/elife.23253 · Cited by 39 · see citing works

Life-long epigenetic programming of cortical architecture by maternal ‘Western’ diet during pregnancy

Cinquina, V., Calvigioni, D., Farlik, M., Halbritter, F., Fife, V. E. R., Shirran, S. L., Fuszard, M. A., Botting, C. H., Poullet, P., Piscitelli, F., et al. (2019) · Molecular Psychiatry · doi:10.1038/s41380-019-0580-4 · Cited by 38 · see citing works

Coupling progenitor and neuronal diversity in the developing neocortex

Govindan, S., & Jabaudon, D. (2017) · FEBS Letters · doi:10.1002/1873-3468.12846 · Cited by 37 · see citing works

Long noncoding RNAs: Central to nervous system development

Hart, R. P., & Goff, L. A. (2016) · International Journal of Developmental Neuroscience · doi:10.1016/j.ijdevneu.2016.06.001 · Cited by 36 · see citing works

The Enhancer Landscape during Early Neocortical Development Reveals Patterns of Dense Regulation and Co-option

Wenger, A. M., Clarke, S. L., Notwell, J. H., Chung, T. R., Tuteja, G., Guturu, H., Schaar, B. T., & Bejerano, G. (2013) · PLoS Genetics · doi:10.1371/journal.pgen.1003728 · Cited by 35 · see citing works

Postmitotic accumulation of histone variant H3.3 in new cortical neurons establishes neuronal chromatin, transcriptome, and identity

Funk, O. H., Qalieh, Y., Doyle, D. Z., Lam, M. M., & Kwan, K. Y. (2022) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.2116956119 · Cited by 33 · see citing works

PsychENCODE and beyond: transcriptomics and epigenomics of brain development and organoids

Jourdon, A., Scuderi, S., Capauto, D., Abyzov, A. S., & Vaccarino, F. M. (2020) · Neuropsychopharmacology · doi:10.1038/s41386-020-0763-3 · Cited by 29 · see citing works

Lack of Methyl-CpG Binding Protein 2 (MeCP2) Affects Cell Fate Refinement During Embryonic Cortical Development

Gigli, C. C., Scaramuzza, L., Simone, M. D., Rossi, R. L., Pozzi, D., Pagani, M., Landsberger, N., & Bedogni, F. (2018) · Cerebral Cortex · doi:10.1093/cercor/bhx360 · Cited by 29 · see citing works

MiR-137 and miR-122, Two Outer Subventricular Zone-Enriched Non-Coding RNAs, Regulate Basal Progenitor Expansion and Neuronal Differentiation

Tomasello, U., Klingler, E., Niquille, M., Mule, N., Santinha, A. J., de Vevey, L., Prados, J., Platt, R. J., Borrell, V., Jabaudon, D., et al. (2021) · Cell Reports · doi:10.1016/j.celrep.2022.110381 · Cited by 28 · see citing works

Hierarchical clustering of gene expression patterns in the Eomes + lineage of excitatory neurons during early neocortical development

Cameron, D. A., Middleton, F. A., Chenn, A., & Olson, E. C. (2012) · BMC Neuroscience · doi:10.1186/1471-2202-13-90 · Cited by 28 · see citing works

Inducible expression of noggin selectively expands neural progenitors in the adult SVZ

Morell, M. H., Tsan, Y.-C., & O’Shea, K. S. (2014) · Stem Cell Research · doi:10.1016/j.scr.2014.11.001 · Cited by 27 · see citing works

Maternal-fetal unit interactions and eutherian neocortical development and evolution

Montiel, J. F., Kaune, H., & Maliqueo, M. A. (2013) · Frontiers in Neuroanatomy · doi:10.3389/fnana.2013.00022 · Cited by 27 · see citing works

Transcriptomics of critical period of visual cortical plasticity in mice

Benoit, J. D., Ayoub, A. E., & RAKIC, P. T. (2015) · Proceedings of the National Academy of Sciences · doi:10.1073/pnas.1509323112 · Cited by 26 · see citing works

Dab2ip Regulates Neuronal Migration and Neurite Outgrowth in the Developing Neocortex

Lee, G. H., Kim, S. H., Homayouni, R., & D’Arcangelo, G. (2012) · PLoS ONE · doi:10.1371/journal.pone.0046592 · Cited by 26 · see citing works

Consequences of early life stress on genomic landscape of H3K4me3 in prefrontal cortex of adult mice

Ershov, N., Bondar, N. P., Lepeshko, A. A., Reshetnikov, V. V., Ryabushkina, J., & Merkulova, T. I. (2018) · BMC Genomics · doi:10.1186/s12864-018-4479-2 · Cited by 25 · see citing works

The Emergence of Mammals

Rowe, T. B. (2016) · Evolution of Nervous Systems · doi:10.1016/b978-0-12-804042-3.00029-4 · Cited by 24 · see citing works

Research Resource: The Dexamethasone Transcriptome in Hypothalamic Embryonic Neural Stem Cells

Frahm, K., Peffer, M. E., Zhang, J. Y., Luthra, S., Chakka, A. B., Couger, M. B., Chandran, U. R., Monaghan, A. P., & DeFranco, D. B. (2015) · Molecular Endocrinology · doi:10.1210/me.2015-1258 · Cited by 23 · see citing works

STRAP regulates alternative splicing fidelity during lineage commitment of mouse embryonic stem cells

Jin, L., Chen, Y., Crossman, D. K., Datta, A., Vu, T., Mobley, J. A., Basu, M. K., Scarduzio, M., Wang, H., Chang, C., et al. (2020) · Nature Communications · doi:10.1038/s41467-020-19698-6 · Cited by 23 · see citing works

Uncovering the Transcriptional Correlates of Hub Connectivity in Neural Networks

Arnatkevičiūtė, A., Fulcher, B., & Fornito, A. (2019) · Frontiers in Neural Circuits · doi:10.3389/fncir.2019.00047 · Cited by 22 · see citing works

Comprehensive genomic profiling in diabetic nephropathy reveals the predominance of proinflammatory pathways

Kelly, K. J., Liu, Y., Zhang, J., Goswami, C. P., Lin, H., & Dominguez, J. H. (2013) · Physiological Genomics · doi:10.1152/physiolgenomics.00028.2013 · Cited by 22 · see citing works

Mapping arealisation of the visual cortex of non-primate species: lessons for development and evolution

Homman‐Ludiye, J. (2014) · Frontiers in Neural Circuits · doi:10.3389/fncir.2014.00079 · Cited by 21 · see citing works

Alternative RNA Splicing Associated With Mammalian Neuronal Differentiation

Liu, J., Geng, A., Wu, X., Lin, R.-J., & Lü, Q. (2017) · Cerebral Cortex · doi:10.1093/cercor/bhx160 · Cited by 21 · see citing works

Molecular investigations of the brain of higher mammals using gyrencephalic carnivore ferrets

Kawasaki, H. (2014) · Neuroscience Research · doi:10.1016/j.neures.2014.06.006 · Cited by 21 · see citing works

A comprehensive review on DDX3X liquid phase condensation in health and neurodevelopmental disorders

Silva, I. R. E., Smetana, J. H. C., & de Oliveira, J. F. (2024) · International Journal of Biological Macromolecules · doi:10.1016/j.ijbiomac.2024.129330 · Cited by 19 · see citing works

Opposite Roles of Wnt7a and Sfrp1 in Modulating Proper Development of Neural Progenitors in the Mouse Cerebral Cortex

Miao, N., Bian, S., Lee, T., Mubarak, T., Huang, S., Wen, Z., Hussain, G., & Sun, T. (2018) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2018.00247 · Cited by 18 · see citing works

Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development

Bedogni, F., & Hevner, R. F. (2021) · Frontiers in Molecular Neuroscience · doi:10.3389/fnmol.2021.686034 · Cited by 18 · see citing works

The frontier of RNA metamorphosis and ribosome signature in neocortical development

Kraushar, M. L., Popovitchenko, T., Volk, N. L., & Rašin, M. (2016) · International Journal of Developmental Neuroscience · doi:10.1016/j.ijdevneu.2016.02.003 · Cited by 18 · see citing works

A hierarchical coherent‐gene‐group model for brain development

Tsigelny, I. F., Kouznetsova, V. L., Baitaluk, M., & Changeux, J. (2012) · Genes Brain & Behavior · doi:10.1111/gbb.12005 · Cited by 17 · see citing works

Molecular investigations of development and diseases of the brain of higher mammals using the ferret

Kawasaki, H. (2017) · Proceedings of the Japan Academy Series B · doi:10.2183/pjab.93.017 · Cited by 17 · see citing works

The Guidance Molecule Semaphorin3A is Differentially Involved in the Arealization of the Mouse and Primate Neocortex

Homman‐Ludiye, J., & Bourne, J. A. (2013) · Cerebral Cortex · doi:10.1093/cercor/bht141 · Cited by 16 · see citing works

Radial Migration Dynamics Is Modulated in a Laminar and Area-Specific Manner During Primate Corticogenesis

Cortay, V., Delaunay, D., Patti, D., Gautier, E., Doerflinger, N., Giroud, P., Knoblauch, K., Huissoud, C., Kennedy, H., & Dehay, C. (2020) · Frontiers in Cell and Developmental Biology · doi:10.3389/fcell.2020.588814 · Cited by 16 · see citing works

Aspartate in the Brain: A Review

Rae, C. D., Rowlands, B. D., & Balcar, V. J. (2025) · Neurochemical Research · doi:10.1007/s11064-025-04454-3 · Cited by 15 · see citing works

The Emergence of Mammals

Rowe, T. B. (2020) · Elsevier eBooks · doi:10.1016/b978-0-12-820584-6.00011-8 · Cited by 14 · see citing works

Breasi-CRISPR: an efficient genome-editing method to interrogate protein localization and protein–protein interactions in the embryonic mouse cortex

Meyerink, B. L., Pratiksha, K. C., Tiwari, N. K., Kittock, C. M., Klein, A. K., Evans, C. M., & Pilaz, L. (2022) · Development · doi:10.1242/dev.200616 · Cited by 14 · see citing works

Astrocytes modulate neuronal development by S100A6 signaling

Cinquina, V., Tretiakov, E. O., Kalaba, P., Alpár, A., Calvigioni, D., Piscitelli, F., Keimpema, E., Marzo, V. D., Verkhratsky, A., & Harkany, T. (2025) · Nature Communications · doi:10.1038/s41467-025-64405-y · Cited by 13 · see citing works

Transcriptome Analysis Identifies SenZfp536, a Sense LncRNA that Suppresses Self-renewal of Cortical Neural Progenitors

Tian, K., Wang, A., Wang, J., Li, W., Shen, W., Li, Y., Luo, Z., Liu, Y., & Zhou, Y. (2020) · Neuroscience Bulletin · doi:10.1007/s12264-020-00607-2 · Cited by 13 · see citing works

Cannabinoid Type 1 Receptor is Undetectable in Rodent and Primate Cerebral Neural Stem Cells but Participates in Radial Neuronal Migration

Morozov, Y. M., Mackie, K., & RAKIC, P. T. (2020) · International Journal of Molecular Sciences · doi:10.3390/ijms21228657 · Cited by 13 · see citing works

Identification and expression patterns of novel long non-coding RNAs in neural progenitors of the developing mammalian cortex

Aprea, J., Lesche, M., Massalini, S., Prenninger, S., Alexopoulou, D., Dahl, A., Hiller, M., & Calegari, F. (2015) · Neurogenesis · doi:10.1080/23262133.2014.995524 · Cited by 13 · see citing works

Conserved and divergent expression dynamics during early patterning of the telencephalon in mouse and chick embryos

Muley, V. Y., López–Victorio, C. J., Ayala-Sumuano, J. T., González‐Gallardo, A., González-Santos, L., Lozano‐Flores, C., Wray, G. A., Hernández-Rosales, M., & Varela‐Echavarría, A. (2019) · Progress in Neurobiology · doi:10.1016/j.pneurobio.2019.101735 · Cited by 12 · see citing works

Pum2 and TDP-43 refine area-specific cytoarchitecture post-mitotically and modulate translation of Sox5, Bcl11b, and Rorb mRNAs in developing mouse neocortex

Harb, K., Richter, M., Neelagandan, N., Magrinelli, E., Harfoush, H., Kuechler, K., Henis, M., Hermanns-Borgmeyer, I., de Anda, F. C., & Duncan, K. E. (2022) · eLife · doi:10.7554/elife.55199 · Cited by 11 · see citing works

Functional associations among G protein-coupled neurotransmitter receptors in the human brain

Janušonis, S. (2014) · BMC Neuroscience · doi:10.1186/1471-2202-15-16 · Cited by 11 · see citing works

A comparison of the sexually dimorphic dexamethasone transcriptome in mouse cerebral cortical and hypothalamic embryonic neural stem cells

Frahm, K., Waldman, J. K., Luthra, S., Rudine, A. C., Monaghan, A. P., Chandran, U. R., & DeFranco, D. B. (2017) · Molecular and Cellular Endocrinology · doi:10.1016/j.mce.2017.05.026 · Cited by 11 · see citing works

Sequential transcriptional waves direct the differentiation of newborn neurons in the mouse neocortex

Telley, L., Govindan, S., Prados, J., Stévant, I., Nef, S., Dermitzakis, E. T., Dayer, A. G., & Jabaudon, D. (2016) · Science · doi:10.1126/science.aad8361 · Cited by 330 · see citing works

Temporal and sequential transcriptional dynamics define lineage shifts in corticogenesis

Mukhtar, T., Breda, J., Adam, M. A., Boareto, M., Grobecker, P., Karimaddini, Z., Grison, A., Eschbach, K., Ramakrishnan, C., Vermeul, S., et al. (2022) · The EMBO Journal · doi:10.15252/embj.2022111132 · Cited by 18 · see citing works

Spatial transcriptomic survey of human embryonic cerebral cortex by single-cell RNA-seq analysis

Fan, X., Dong, J., Zhong, S., Wei, Y., Wu, Q., Yan, L., Yong, J., Sun, L., Wang, X., Zhao, Y., et al. (2018) · Cell Research · doi:10.1038/s41422-018-0053-3 · Cited by 216 · see citing works

Tracking neuronal transcriptional programs

Hines, P. J. (2016) · Science · doi:10.1126/science.351.6280.1411-q

Spatial transcriptomics mapping of gene expression in developing mouse brain cortex

Letlape, R., Letlape, M., & Ndaba, R. (2025) · International Journal of Biology Sciences · doi:10.33545/26649926.2025.v7.i1d.680